| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422909
Identifier: 158422909
GI number: 158422909
Start: 1438453
End: 1439985
Strand: Direct
Name: 158422909
Synonym: AZC_1285
Alternate gene names: NA
Gene position: 1438453-1439985 (Clockwise)
Preceding gene: 158422908
Following gene: 158422911
Centisome position: 26.79
GC content: 67.91
Gene sequence:
>1533_bases ATGGCCTCGCTCTCCACCGAGCCCCCCCGTGACCCCGAGACGCTCCAGGCGATGCTGATCGCGCGGGACACGGAGATCGA GCGCCTGCGCCAGATCATCAAGGAGTTGCAGCGCCACCGCTTCGGACGGCGGGCGGAGAGCCTGCCCGAGGACCAACTGC TGCTGGCGCTCGAAGAGGCCGAACAGGTCGAGGCTGCCTACTTCGCCGCGTCCGATGAACAGGTGCCGGCCGAGAAGGCC GAGCGGGTGGCCAAACGCCGTGCGAACCGCGGTGCTTTGCCCGCCCATCTGCCGCGGATCGAGACCGTGATCGATATCGA GAGTGACATCTGCCCCTGCTGTTCCGGCAAGCTGCACCGCATCGGCGAGGATGTGGCGGAACGGCTCGACATGGTGCCTG CCCAGTTCCGCGTCCTGGTGGTGCGGCGGCCGAAATATGCCTGCCGGTCCTGCGCGGACGTGGTGGTGCAGGCCCCCGCT TCGGCTCGGTTGATCGAAGGTGGCATCCCGACCGAGGCAACCGTCGCCCATGTGCTGGTCTCGAAATACGCCGACCATCT GCCCCTGTATCGCCAAGTCCAGATCTATGCGCGGCAGGGCATCGCGCTCGACCGCTCGACGCTGGCGGACTGGGTCGGGC GCGCCGCCTTCCTGCTGCGACCTGTCCACGAGCGGCTGCTGGCGATGCTAAGGGCCTCGACCAAGCTGTTCGCCGACGAG ACCACGGCGCCGGTGCTCGATCCCGGCCGTGGCCGCACCAAGACCGGGCAGCTCTTCGCCTATGCCCGTGATGACCGTCC GTGGGGCGGAGCCGATCCGCCCGCCGTCGCTTATGTCTATGCCCCCGATCGTAAGAGCGAGCGGCCGGTCGCCCACCTCG ACGGCTTCAGCGGCATCCTGCAGGTCGATGGCTATGGCGGCTACAAGGCGCTAGCCGGACGCAACGCCGTGAATCTGGCG TTCTGCTGGGCCCACGTGCGCCGCCGCTTCTACGAGCTCGCTCAGAGCGGTCCCGCGCCGATCGCCAGCGAGGCCCTGCA GCGCATCGCCGAGCTCTATCGCCTCGAGGCTGCGATCCACGGCCGAACCCCAGATGAGCGCCGAGCCTCGCGCCAAGAGA AGAGCAGGCCGATCATCGAGGCCATGGAGCCATGGCTGCGCGAGAAGCTGGCTCTGATCAGCCAGAAGACCAAGCTGGCC GAGGCGATCCGCTATGCGCTCTCGCGCTGGCAGGGGCTGACCCCGTTCCTCGACGACGGCCGCGTCGAGTTGGACAACAA CATCGTCGAGCGCTCCATCCGACCCCTGGCCCTGACCCGGAAGAATGCGCTCTTCGCCGGCTCCGACGGCGGCGCCGAGC ACTGGGCTGTCATGGCTTCGCGGGTCGAGACCTGCAAGCTCAACGACATCGACCCCCAGGCCTACCTCGCGGACGTCATC ACCCGCATCGTCAACAGCCACCCCAACAGCCGCATCGACGACCTCATGCCATGGGCCTACCCAGCACAGCCGGTCCTCAG CAACGTGGCCTGA
Upstream 100 bases:
>100_bases CGACTGGCGGCGAGTGCATGAGGCGCAGCGCACGATGACACCGGTCACCGCCAGCTGAAGAGGCTCGCAGGGGCCTGGCG AATGTGATTCACTTCCGGTC
Downstream 100 bases:
>100_bases AGACGACGCTTACGCTTTTAGGGGGAAGCAGCCCTTCGATCGACCTTGGTCCCGCGACAGCGCACCGAATCCGGTAGGTG ATATCCCATACCAACTAGCT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MASLSTEPPRDPETLQAMLIARDTEIERLRQIIKELQRHRFGRRAESLPEDQLLLALEEAEQVEAAYFAASDEQVPAEKA ERVAKRRANRGALPAHLPRIETVIDIESDICPCCSGKLHRIGEDVAERLDMVPAQFRVLVVRRPKYACRSCADVVVQAPA SARLIEGGIPTEATVAHVLVSKYADHLPLYRQVQIYARQGIALDRSTLADWVGRAAFLLRPVHERLLAMLRASTKLFADE TTAPVLDPGRGRTKTGQLFAYARDDRPWGGADPPAVAYVYAPDRKSERPVAHLDGFSGILQVDGYGGYKALAGRNAVNLA FCWAHVRRRFYELAQSGPAPIASEALQRIAELYRLEAAIHGRTPDERRASRQEKSRPIIEAMEPWLREKLALISQKTKLA EAIRYALSRWQGLTPFLDDGRVELDNNIVERSIRPLALTRKNALFAGSDGGAEHWAVMASRVETCKLNDIDPQAYLADVI TRIVNSHPNSRIDDLMPWAYPAQPVLSNVA
Sequences:
>Translated_510_residues MASLSTEPPRDPETLQAMLIARDTEIERLRQIIKELQRHRFGRRAESLPEDQLLLALEEAEQVEAAYFAASDEQVPAEKA ERVAKRRANRGALPAHLPRIETVIDIESDICPCCSGKLHRIGEDVAERLDMVPAQFRVLVVRRPKYACRSCADVVVQAPA SARLIEGGIPTEATVAHVLVSKYADHLPLYRQVQIYARQGIALDRSTLADWVGRAAFLLRPVHERLLAMLRASTKLFADE TTAPVLDPGRGRTKTGQLFAYARDDRPWGGADPPAVAYVYAPDRKSERPVAHLDGFSGILQVDGYGGYKALAGRNAVNLA FCWAHVRRRFYELAQSGPAPIASEALQRIAELYRLEAAIHGRTPDERRASRQEKSRPIIEAMEPWLREKLALISQKTKLA EAIRYALSRWQGLTPFLDDGRVELDNNIVERSIRPLALTRKNALFAGSDGGAEHWAVMASRVETCKLNDIDPQAYLADVI TRIVNSHPNSRIDDLMPWAYPAQPVLSNVA >Mature_509_residues ASLSTEPPRDPETLQAMLIARDTEIERLRQIIKELQRHRFGRRAESLPEDQLLLALEEAEQVEAAYFAASDEQVPAEKAE RVAKRRANRGALPAHLPRIETVIDIESDICPCCSGKLHRIGEDVAERLDMVPAQFRVLVVRRPKYACRSCADVVVQAPAS ARLIEGGIPTEATVAHVLVSKYADHLPLYRQVQIYARQGIALDRSTLADWVGRAAFLLRPVHERLLAMLRASTKLFADET TAPVLDPGRGRTKTGQLFAYARDDRPWGGADPPAVAYVYAPDRKSERPVAHLDGFSGILQVDGYGGYKALAGRNAVNLAF CWAHVRRRFYELAQSGPAPIASEALQRIAELYRLEAAIHGRTPDERRASRQEKSRPIIEAMEPWLREKLALISQKTKLAE AIRYALSRWQGLTPFLDDGRVELDNNIVERSIRPLALTRKNALFAGSDGGAEHWAVMASRVETCKLNDIDPQAYLADVIT RIVNSHPNSRIDDLMPWAYPAQPVLSNVA
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 56899; Mature: 56767
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLSTEPPRDPETLQAMLIARDTEIERLRQIIKELQRHRFGRRAESLPEDQLLLALEEA CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH EQVEAAYFAASDEQVPAEKAERVAKRRANRGALPAHLPRIETVIDIESDICPCCSGKLHR HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHH IGEDVAERLDMVPAQFRVLVVRRPKYACRSCADVVVQAPASARLIEGGIPTEATVAHVLV HHHHHHHHHHCCCHHEEEEEEECCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHH SKYADHLPLYRQVQIYARQGIALDRSTLADWVGRAAFLLRPVHERLLAMLRASTKLFADE HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTAPVLDPGRGRTKTGQLFAYARDDRPWGGADPPAVAYVYAPDRKSERPVAHLDGFSGIL CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEE QVDGYGGYKALAGRNAVNLAFCWAHVRRRFYELAQSGPAPIASEALQRIAELYRLEAAIH EECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GRTPDERRASRQEKSRPIIEAMEPWLREKLALISQKTKLAEAIRYALSRWQGLTPFLDDG CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RVELDNNIVERSIRPLALTRKNALFAGSDGGAEHWAVMASRVETCKLNDIDPQAYLADVI CEEECCHHHHHCCCCHHEECCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TRIVNSHPNSRIDDLMPWAYPAQPVLSNVA HHHHHCCCCCCHHHCCCCCCCCHHHHHCCC >Mature Secondary Structure ASLSTEPPRDPETLQAMLIARDTEIERLRQIIKELQRHRFGRRAESLPEDQLLLALEEA CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH EQVEAAYFAASDEQVPAEKAERVAKRRANRGALPAHLPRIETVIDIESDICPCCSGKLHR HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHH IGEDVAERLDMVPAQFRVLVVRRPKYACRSCADVVVQAPASARLIEGGIPTEATVAHVLV HHHHHHHHHHCCCHHEEEEEEECCCHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHH SKYADHLPLYRQVQIYARQGIALDRSTLADWVGRAAFLLRPVHERLLAMLRASTKLFADE HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTAPVLDPGRGRTKTGQLFAYARDDRPWGGADPPAVAYVYAPDRKSERPVAHLDGFSGIL CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEE QVDGYGGYKALAGRNAVNLAFCWAHVRRRFYELAQSGPAPIASEALQRIAELYRLEAAIH EECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GRTPDERRASRQEKSRPIIEAMEPWLREKLALISQKTKLAEAIRYALSRWQGLTPFLDDG CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC RVELDNNIVERSIRPLALTRKNALFAGSDGGAEHWAVMASRVETCKLNDIDPQAYLADVI CEEECCHHHHHCCCCHHEECCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH TRIVNSHPNSRIDDLMPWAYPAQPVLSNVA HHHHHCCCCCCHHHCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]