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The map label for this gene is exbB [H]

Identifier: 158422882

GI number: 158422882

Start: 1408799

End: 1409983

Strand: Direct

Name: exbB [H]

Synonym: AZC_1258

Alternate gene names: 158422882

Gene position: 1408799-1409983 (Clockwise)

Preceding gene: 158422879

Following gene: 158422883

Centisome position: 26.24

GC content: 72.32

Gene sequence:

>1185_bases
GTGCGATCGGGGATCGCCAGCCAACCGATGTCCTTTGAACGATCGATTGCTGGTGGCGTGATGACGATACGCGGTGGTTC
TTCCAAGCCTGTGGCGCGTGTGCGGGGTGCGATGGCAGCCGTCGCTGCGCTGTCCGTTGCCTTGACCCTCAGCTGCGGAG
CCCGGGCCGAGGACAAACTGCGCCTCGCGCAGACAACCGCCCCGGTGGCGGCCGCGCCCGCCGTTACCCCCACAGCGCCG
AAGCCCGCACCCGTGGCGCCGTCACCTTACGGCGTGCAGCCTTCCGCTCCGCCGGCGCCCGTCGGTGCACCGCCGCCGCC
GTCGGCCGCCCTTGCCCCCGCGACGGCCCAGCTCCCTCCGGCTACGGCTCCCGCCACTCCGCCCGCCCCGACCGCCCCCG
CTGGCGCTGCTCCGGCCTCGGCGGCTGCGCCTGCGCTTCCCGCGCCGCCTGCGCCCGCCGCGGAAGCCGCGCCCCGGCCG
GCGGCGCTGCTGCCCCATGACCTGTCCCCCTGGGGCATGTTCATGGCTGCGGACATCGTGGTGAAGGTGGTGATGAGCGG
CCTCGCGCTCGCCTCCGTCATCACCTGGACCATCTGGCTGGTGAAGGTGCTCGAACTCACCACCGCCAACCGTCAGGTGC
GGCGCGCGCTGCACACCCTGCGCGAATCATCCAACCTGCTGGGCAGCGCCCGCGCCCTGCCGCCGCGCGGCGGCGCCTCC
GCCCGCCTCATCCAGTCGGCGCTCGGCGAACTCGAAGCCTCCCGGGCCCTGCCTGCCGAAGGCATCAAGGAGCGCGTCGC
CATATCGCTCAACCGCATCGAGGCGGCGGCGGGCCGGCGCATGTCGCTCGGCACGGGCCTTCTCGCCACCATCGGTTCCA
CGGCGCCCTTCATCGGCCTGTTCGGCACCGTGTGGGGCATCATGAACAGCTTCATCGGCATCTCGAAGGCGCAGACCACC
AACCTCGCGGTGGTCGCCCCCGGCATCGCCGAGGCGCTGCTCGCCACCGCCATCGGCCTCGTGGCGGCCATCCCGGCGGT
CATCATCTACAACGTCTTCGCCCGCGCCATCTCCAACTACAAGGCGAGCCTCTCTGACGCCTCGGCCGAGGTGATGCGCC
ACCTCTCCCGCGATCTCGATCGCGAGGCCTCGGGGGCCAACCGTCTGCGCGCTGCGGCGGAGTGA

Upstream 100 bases:

>100_bases
CACCGGATGCGTCATCTGCGCACAACGGTCGTTCCGCGCACATTTTCATTCCGCAGCGCGGCGAAAACGCGTTATAAGGG
ACCCAGCCAGCCAATTCCCC

Downstream 100 bases:

>100_bases
GCCATGGCCGCGAAGCTTGATCTCGGCGGGGATGACCTCGTCGAAAACCACGACATCAACGTCACGCCCTTCATCGACGT
CATTTTGGTGCTGCTCATCA

Product: biopolymer transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRSGIASQPMSFERSIAGGVMTIRGGSSKPVARVRGAMAAVAALSVALTLSCGARAEDKLRLAQTTAPVAAAPAVTPTAP
KPAPVAPSPYGVQPSAPPAPVGAPPPPSAALAPATAQLPPATAPATPPAPTAPAGAAPASAAAPALPAPPAPAAEAAPRP
AALLPHDLSPWGMFMAADIVVKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNLLGSARALPPRGGAS
ARLIQSALGELEASRALPAEGIKERVAISLNRIEAAAGRRMSLGTGLLATIGSTAPFIGLFGTVWGIMNSFIGISKAQTT
NLAVVAPGIAEALLATAIGLVAAIPAVIIYNVFARAISNYKASLSDASAEVMRHLSRDLDREASGANRLRAAAE

Sequences:

>Translated_394_residues
MRSGIASQPMSFERSIAGGVMTIRGGSSKPVARVRGAMAAVAALSVALTLSCGARAEDKLRLAQTTAPVAAAPAVTPTAP
KPAPVAPSPYGVQPSAPPAPVGAPPPPSAALAPATAQLPPATAPATPPAPTAPAGAAPASAAAPALPAPPAPAAEAAPRP
AALLPHDLSPWGMFMAADIVVKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNLLGSARALPPRGGAS
ARLIQSALGELEASRALPAEGIKERVAISLNRIEAAAGRRMSLGTGLLATIGSTAPFIGLFGTVWGIMNSFIGISKAQTT
NLAVVAPGIAEALLATAIGLVAAIPAVIIYNVFARAISNYKASLSDASAEVMRHLSRDLDREASGANRLRAAAE
>Mature_394_residues
MRSGIASQPMSFERSIAGGVMTIRGGSSKPVARVRGAMAAVAALSVALTLSCGARAEDKLRLAQTTAPVAAAPAVTPTAP
KPAPVAPSPYGVQPSAPPAPVGAPPPPSAALAPATAQLPPATAPATPPAPTAPAGAAPASAAAPALPAPPAPAAEAAPRP
AALLPHDLSPWGMFMAADIVVKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNLLGSARALPPRGGAS
ARLIQSALGELEASRALPAEGIKERVAISLNRIEAAAGRRMSLGTGLLATIGSTAPFIGLFGTVWGIMNSFIGISKAQTT
NLAVVAPGIAEALLATAIGLVAAIPAVIIYNVFARAISNYKASLSDASAEVMRHLSRDLDREASGANRLRAAAE

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=228, Percent_Identity=57.4561403508772, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI1786958, Length=234, Percent_Identity=32.9059829059829, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014164 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 39623; Mature: 39623

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGIASQPMSFERSIAGGVMTIRGGSSKPVARVRGAMAAVAALSVALTLSCGARAEDKL
CCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RLAQTTAPVAAAPAVTPTAPKPAPVAPSPYGVQPSAPPAPVGAPPPPSAALAPATAQLPP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATAPATPPAPTAPAGAAPASAAAPALPAPPAPAAEAAPRPAALLPHDLSPWGMFMAADIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNLLGSARALPPRGGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ARLIQSALGELEASRALPAEGIKERVAISLNRIEAAAGRRMSLGTGLLATIGSTAPFIGL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCHHHHH
FGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYNVFARAISNY
HHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KASLSDASAEVMRHLSRDLDREASGANRLRAAAE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MRSGIASQPMSFERSIAGGVMTIRGGSSKPVARVRGAMAAVAALSVALTLSCGARAEDKL
CCCCCCCCCCHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RLAQTTAPVAAAPAVTPTAPKPAPVAPSPYGVQPSAPPAPVGAPPPPSAALAPATAQLPP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATAPATPPAPTAPAGAAPASAAAPALPAPPAPAAEAAPRPAALLPHDLSPWGMFMAADIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VKVVMSGLALASVITWTIWLVKVLELTTANRQVRRALHTLRESSNLLGSARALPPRGGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ARLIQSALGELEASRALPAEGIKERVAISLNRIEAAAGRRMSLGTGLLATIGSTAPFIGL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCCHHHHH
FGTVWGIMNSFIGISKAQTTNLAVVAPGIAEALLATAIGLVAAIPAVIIYNVFARAISNY
HHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KASLSDASAEVMRHLSRDLDREASGANRLRAAAE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]