| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422838
Identifier: 158422838
GI number: 158422838
Start: 1359864
End: 1362275
Strand: Direct
Name: 158422838
Synonym: AZC_1214
Alternate gene names: NA
Gene position: 1359864-1362275 (Clockwise)
Preceding gene: 158422837
Following gene: 158422839
Centisome position: 25.32
GC content: 72.39
Gene sequence:
>2412_bases GTGCCCGGCGCCCGGGGGCCGGCCAGCGGCAAGCCTTCCGGCCTCTCCCTTCATCGCAGACCTGACACACGGCCCCTGTT GCGGATCGGCCACCGCTCCTTTACGTGCCAAGCGCGCGGCGGCGGGCTAAGGTCGCGCGCGGCGTGGCTTGGGACCGGAG CGGCCGGAGGCGATCGTTTTTCGCCTGACCGCATGCGGGTCGATGGCACGCCGGGGGCGAAAGCGCTCCCGATGACATCG ACTTGGCGGCACCGCCGGCGGGAGACAGGAATGGACGAGAAGGCGGGTCTCCGCGGGCAGAGGGAGACGGAAGGGGGCAC CCTTCTCGACCTCAGGATACTCGGGGTTGGCCTCATCCTTCTGTGCGTGCTCGTCGCCTTTACCGTGCATGTCAGCCGCC CGGGCATCGAGGCGGATCTCGCGGTGCGCGCCGCCGAGCGGCTCGACGCCATCGGCGAATCCTGGGCGACCGCCCGCTTC TCCGGCCGCGATGCGACGCTCATCGGCGAGGCGCTGGCGCAGGAGCCGCGCGACAAGGTGCGTGGGGCGATCGAATCCCT GTCGGGCGTCGGCTCCGTCACGGATGCCACCACCCTCCTGCCGGAGCGCCGCCCCTTCACCTTCTCCGTCATCCGCGATG GCCCTCGCGTCCAGCTCGAAGGCTACGTGCCCTCCCGCTATGCGCTCGCGCGCATCGCCGCTGCGGTGAAGGGCCTGCCT CCGGGCCTGGAGGTCCGTGGCCTCGACCAGCTCGTTCGCGCCCGTGGCGCGCCGCCGGGCGATTTTTCCTCGGTGGTCAT CTTCGCCCTTGATGCGCTGATGCGGGTGCAGAGCGGGCGCATCACCCTTTCCGACGACATGCTGTCCATCGAAGGGCGCG CGCCCGACCTTGCGGCCTACAATGCGCTGCGCCTCACCATGAGCGAGCCGCTGCCGCAGGATTTCCGCCTCGCGCGCTTC GCGGTGCGCCCGCCCGCCGCCTCGCCTTATCTGTGGTCGGCTGCCCGCGAGGGCAGGGCGGTGGTGGTGCGCGGCCATGT GCCGTCGGAAGAGGTGCGCCAGCAGGTGCTCGCGGCCCTGCGCGCCGCCATGCCGGAGGCCGGCATCTCCGACCATACGG ACCTTGCCGACGGAGCGCCCAGCCTCGACCGCTGGCTCGCCGCCGTCCGTTTCGCCGCCAACCAGCTCGCGCTCGTGCCT ACGGGACAGGTGAGCCTGTCCAACACCTCCATCTATCTGGAGGGCGCGGCCAGCACCTTCCCGATCTATGACGCGCTCTC GGCCGCCCGCCGCGCGCCGCCCGAGGGCTTTCAGGTGGTCCGCTTCTCCGTGGAGCCGCCGGTGGCTGCGCCCTTCATAT GGCGGGTCTCCCGGCAGGGAGGGCAGGCGCAGATCTCCGGCTATGCGCCGAGCGAGGATGCGCGGCGCGTGATGGGCGAT GCGGTGAAGGCGCTGTTCGCCGGCGTGCAGGTGAGCGATCAGGTCCGGCTCGCCTCTGGCGGACCGCCCTCCGACATCTG GACCGCCGCGGTCACCTTCGCCCTCACGCAGGTGAGCCGCATGGCGCAGGGCGAGGCTTCGGTGCTCACCGGCGCGGTGA CGCTGAGCGGCGAGGCGGCGGACAGCGCCAGCTATGCCAGCCTGCGCGACGCGCTCAAGGCACCGCCGCCGGGCGTGAAG GTGGATGCCTCCCGCGTGCTGCCGCCGGTCATCTCGCCTTATGTCTTCGCCGTCCGGACGGAGGAGAGCGGTGTCACGCT CTCCGGCTTCTTTCCGGACGATGCGGTCCATGCGCGCCTGCTGGAGACGGTCGGGCGCCTCTTTCCCGGCGTGCGGGTCA ATGACGTGACGGCCGTGGGCGCCGGGGCGCCGCCGCGCTTTGCCGATGCGGCGATTGCCGCGCTCGCCCCGCTCGCCCGC CTGGAGACCGGAGACCTGCGCTTCTCCGACGGTCAGGTGAGCCTGTCCGGCACCGATCGCTACCCTGCCGCCGGGGCGCA GATTGAGGCGGAGCTCAAGGCCGCGCTGCCTAAGGGCTTCGCGATGGATCTCGCGGTGGAGGCCCCTCCGGCGAGCCTGC CCGTGGGCCCGCGCGAATGCCTGAAGCTGCTCACGGACGCCACGGCGCGCGGACTCGTCTTCCTGCCGGGCGGCCAGCCG GGGCCGGGCAGCCTGCCGGCGCTGGATCGCCTGGCGCAGGCGGCGCTGCGCTGTCCGCCGCTCGCGCTCCAGGGGGCGCA GGGGGCGGCGGTGCCCGATCCCGTCGCCGCCATCCAGGGCGAGGCGATCCGCGCGCATCTTGTGGCGGCGGGCGTTCCGG CCTCCCATGTCTCCTGGATGGCGGACTTCGGCGGGGAGGGGGCGGAATCCCTCACCGTCGCCGGGGTGCGTATTTCCGTG CGACCGCAATAG
Upstream 100 bases:
>100_bases TGGAGAACCCCGGCGGGCAACCGCCGGGGTTTTTCGTTTTGGGCCACTCGTCTCACACCTTCTGGTGGGCTGGTGACGCC GCCGTGCTGCGGCGCCTGGA
Downstream 100 bases:
>100_bases GGGGCGGCCATGGTCTATCTGTTTCTAAATCTCTGGCCCTATGAGCTTCTGGCGCTCGGGCTCGGCTTCGCCACCGTCTA TCTGGCGTTCCGTCCGAGGG
Product: outer membrane protein 2
Products: NA
Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA/MotB Domain Protein; Outer Membrane Protein; Transport-Associated Protein
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MPGARGPASGKPSGLSLHRRPDTRPLLRIGHRSFTCQARGGGLRSRAAWLGTGAAGGDRFSPDRMRVDGTPGAKALPMTS TWRHRRRETGMDEKAGLRGQRETEGGTLLDLRILGVGLILLCVLVAFTVHVSRPGIEADLAVRAAERLDAIGESWATARF SGRDATLIGEALAQEPRDKVRGAIESLSGVGSVTDATTLLPERRPFTFSVIRDGPRVQLEGYVPSRYALARIAAAVKGLP PGLEVRGLDQLVRARGAPPGDFSSVVIFALDALMRVQSGRITLSDDMLSIEGRAPDLAAYNALRLTMSEPLPQDFRLARF AVRPPAASPYLWSAAREGRAVVVRGHVPSEEVRQQVLAALRAAMPEAGISDHTDLADGAPSLDRWLAAVRFAANQLALVP TGQVSLSNTSIYLEGAASTFPIYDALSAARRAPPEGFQVVRFSVEPPVAAPFIWRVSRQGGQAQISGYAPSEDARRVMGD AVKALFAGVQVSDQVRLASGGPPSDIWTAAVTFALTQVSRMAQGEASVLTGAVTLSGEAADSASYASLRDALKAPPPGVK VDASRVLPPVISPYVFAVRTEESGVTLSGFFPDDAVHARLLETVGRLFPGVRVNDVTAVGAGAPPRFADAAIAALAPLAR LETGDLRFSDGQVSLSGTDRYPAAGAQIEAELKAALPKGFAMDLAVEAPPASLPVGPRECLKLLTDATARGLVFLPGGQP GPGSLPALDRLAQAALRCPPLALQGAQGAAVPDPVAAIQGEAIRAHLVAAGVPASHVSWMADFGGEGAESLTVAGVRISV RPQ
Sequences:
>Translated_803_residues MPGARGPASGKPSGLSLHRRPDTRPLLRIGHRSFTCQARGGGLRSRAAWLGTGAAGGDRFSPDRMRVDGTPGAKALPMTS TWRHRRRETGMDEKAGLRGQRETEGGTLLDLRILGVGLILLCVLVAFTVHVSRPGIEADLAVRAAERLDAIGESWATARF SGRDATLIGEALAQEPRDKVRGAIESLSGVGSVTDATTLLPERRPFTFSVIRDGPRVQLEGYVPSRYALARIAAAVKGLP PGLEVRGLDQLVRARGAPPGDFSSVVIFALDALMRVQSGRITLSDDMLSIEGRAPDLAAYNALRLTMSEPLPQDFRLARF AVRPPAASPYLWSAAREGRAVVVRGHVPSEEVRQQVLAALRAAMPEAGISDHTDLADGAPSLDRWLAAVRFAANQLALVP TGQVSLSNTSIYLEGAASTFPIYDALSAARRAPPEGFQVVRFSVEPPVAAPFIWRVSRQGGQAQISGYAPSEDARRVMGD AVKALFAGVQVSDQVRLASGGPPSDIWTAAVTFALTQVSRMAQGEASVLTGAVTLSGEAADSASYASLRDALKAPPPGVK VDASRVLPPVISPYVFAVRTEESGVTLSGFFPDDAVHARLLETVGRLFPGVRVNDVTAVGAGAPPRFADAAIAALAPLAR LETGDLRFSDGQVSLSGTDRYPAAGAQIEAELKAALPKGFAMDLAVEAPPASLPVGPRECLKLLTDATARGLVFLPGGQP GPGSLPALDRLAQAALRCPPLALQGAQGAAVPDPVAAIQGEAIRAHLVAAGVPASHVSWMADFGGEGAESLTVAGVRISV RPQ >Mature_802_residues PGARGPASGKPSGLSLHRRPDTRPLLRIGHRSFTCQARGGGLRSRAAWLGTGAAGGDRFSPDRMRVDGTPGAKALPMTST WRHRRRETGMDEKAGLRGQRETEGGTLLDLRILGVGLILLCVLVAFTVHVSRPGIEADLAVRAAERLDAIGESWATARFS GRDATLIGEALAQEPRDKVRGAIESLSGVGSVTDATTLLPERRPFTFSVIRDGPRVQLEGYVPSRYALARIAAAVKGLPP GLEVRGLDQLVRARGAPPGDFSSVVIFALDALMRVQSGRITLSDDMLSIEGRAPDLAAYNALRLTMSEPLPQDFRLARFA VRPPAASPYLWSAAREGRAVVVRGHVPSEEVRQQVLAALRAAMPEAGISDHTDLADGAPSLDRWLAAVRFAANQLALVPT GQVSLSNTSIYLEGAASTFPIYDALSAARRAPPEGFQVVRFSVEPPVAAPFIWRVSRQGGQAQISGYAPSEDARRVMGDA VKALFAGVQVSDQVRLASGGPPSDIWTAAVTFALTQVSRMAQGEASVLTGAVTLSGEAADSASYASLRDALKAPPPGVKV DASRVLPPVISPYVFAVRTEESGVTLSGFFPDDAVHARLLETVGRLFPGVRVNDVTAVGAGAPPRFADAAIAALAPLARL ETGDLRFSDGQVSLSGTDRYPAAGAQIEAELKAALPKGFAMDLAVEAPPASLPVGPRECLKLLTDATARGLVFLPGGQPG PGSLPALDRLAQAALRCPPLALQGAQGAAVPDPVAAIQGEAIRAHLVAAGVPASHVSWMADFGGEGAESLTVAGVRISVR PQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84013; Mature: 83882
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGARGPASGKPSGLSLHRRPDTRPLLRIGHRSFTCQARGGGLRSRAAWLGTGAAGGDRF CCCCCCCCCCCCCCCEECCCCCCCHHHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCCC SPDRMRVDGTPGAKALPMTSTWRHRRRETGMDEKAGLRGQRETEGGTLLDLRILGVGLIL CCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHH LCVLVAFTVHVSRPGIEADLAVRAAERLDAIGESWATARFSGRDATLIGEALAQEPRDKV HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCHHHHH RGAIESLSGVGSVTDATTLLPERRPFTFSVIRDGPRVQLEGYVPSRYALARIAAAVKGLP HHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCC PGLEVRGLDQLVRARGAPPGDFSSVVIFALDALMRVQSGRITLSDDMLSIEGRAPDLAAY CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHH NALRLTMSEPLPQDFRLARFAVRPPAASPYLWSAAREGRAVVVRGHVPSEEVRQQVLAAL HEEEEEECCCCCCHHHHHHEEECCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH RAAMPEAGISDHTDLADGAPSLDRWLAAVRFAANQLALVPTGQVSLSNTSIYLEGAASTF HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEECCCCCC PIYDALSAARRAPPEGFQVVRFSVEPPVAAPFIWRVSRQGGQAQISGYAPSEDARRVMGD CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHH AVKALFAGVQVSDQVRLASGGPPSDIWTAAVTFALTQVSRMAQGEASVLTGAVTLSGEAA HHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC DSASYASLRDALKAPPPGVKVDASRVLPPVISPYVFAVRTEESGVTLSGFFPDDAVHARL CCHHHHHHHHHHCCCCCCCEECHHHCCCHHHCCEEEEEEECCCCEEEEECCCCHHHHHHH LETVGRLFPGVRVNDVTAVGAGAPPRFADAAIAALAPLARLETGDLRFSDGQVSLSGTDR HHHHHHHCCCCEEECEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCC YPAAGAQIEAELKAALPKGFAMDLAVEAPPASLPVGPRECLKLLTDATARGLVFLPGGQP CCCCCCEEHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCC GPGSLPALDRLAQAALRCPPLALQGAQGAAVPDPVAAIQGEAIRAHLVAAGVPASHVSWM CCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHCCCHHEEEEEECCCCHHHHHHH ADFGGEGAESLTVAGVRISVRPQ HHCCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure PGARGPASGKPSGLSLHRRPDTRPLLRIGHRSFTCQARGGGLRSRAAWLGTGAAGGDRF CCCCCCCCCCCCCCEECCCCCCCHHHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCCC SPDRMRVDGTPGAKALPMTSTWRHRRRETGMDEKAGLRGQRETEGGTLLDLRILGVGLIL CCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHH LCVLVAFTVHVSRPGIEADLAVRAAERLDAIGESWATARFSGRDATLIGEALAQEPRDKV HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHCHHHHH RGAIESLSGVGSVTDATTLLPERRPFTFSVIRDGPRVQLEGYVPSRYALARIAAAVKGLP HHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCC PGLEVRGLDQLVRARGAPPGDFSSVVIFALDALMRVQSGRITLSDDMLSIEGRAPDLAAY CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCHHHH NALRLTMSEPLPQDFRLARFAVRPPAASPYLWSAAREGRAVVVRGHVPSEEVRQQVLAAL HEEEEEECCCCCCHHHHHHEEECCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH RAAMPEAGISDHTDLADGAPSLDRWLAAVRFAANQLALVPTGQVSLSNTSIYLEGAASTF HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEECCCCCC PIYDALSAARRAPPEGFQVVRFSVEPPVAAPFIWRVSRQGGQAQISGYAPSEDARRVMGD CHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEECCCCCHHHHHHHHH AVKALFAGVQVSDQVRLASGGPPSDIWTAAVTFALTQVSRMAQGEASVLTGAVTLSGEAA HHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC DSASYASLRDALKAPPPGVKVDASRVLPPVISPYVFAVRTEESGVTLSGFFPDDAVHARL CCHHHHHHHHHHCCCCCCCEECHHHCCCHHHCCEEEEEEECCCCEEEEECCCCHHHHHHH LETVGRLFPGVRVNDVTAVGAGAPPRFADAAIAALAPLARLETGDLRFSDGQVSLSGTDR HHHHHHHCCCCEEECEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCC YPAAGAQIEAELKAALPKGFAMDLAVEAPPASLPVGPRECLKLLTDATARGLVFLPGGQP CCCCCCEEHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCC GPGSLPALDRLAQAALRCPPLALQGAQGAAVPDPVAAIQGEAIRAHLVAAGVPASHVSWM CCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHCCCHHEEEEEECCCCHHHHHHH ADFGGEGAESLTVAGVRISVRPQ HHCCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA