Click here to switch to the map view.

The map label for this gene is omp2b [H]

Identifier: 158422837

GI number: 158422837

Start: 1358036

End: 1359745

Strand: Direct

Name: omp2b [H]

Synonym: AZC_1213

Alternate gene names: 158422837

Gene position: 1358036-1359745 (Clockwise)

Preceding gene: 158422832

Following gene: 158422838

Centisome position: 25.29

GC content: 64.62

Gene sequence:

>1710_bases
ATGGGTGTCGCGAAAACGTGTTGTTCCTGCAACACCCCTGGGAAAAGGCCCTTCCCCCCTGCCTTTTGGAGTGTGTCGAG
ATTGATCCCCGGTCCGGCTTTTGTAAGGTGGCTTTGCGACGAAGGGGGGCAGTCCCCGGTCGCCCCATACTGTGTTGGCC
TGGTGGCGAGCCGGTGGGGGAATCGGGGTCAAGACCTCTCGCTGGTGGCAACATCGACGAAGCGGCTGGCTCCCTCGGAA
CAAAATTTGGAGGTCACAATGAACATGGTGAAGAGCCTTCTGCTCGGTAGCGTCGCGGGTCTCGCCGCCGTCGCCGGCGC
CCAGGCTGCCGACCTTCCCGTGAAGGCGAAGGCTGTGGAGTACGTGAAGGTGTGCTCCGCTTACGGCGCGGGCTTCTACT
ACATCCCCGGCACCGACACCTGCCTCAAGATCGACGGCTACGCCCGCTTCGACACCTACATCAACGCCGTCGGCACCTTC
AACCCGAACATCTCGTCGGTTGCTGGCACCGGCTTCAACGGTCCCGGCGCTGGCGCTGGCGGCTATCCGTACAAGGACTC
TGACGACTCGTCCTACCTGACCCGCGCCCGCGCGGTGTTCGGTCTCGACGCTCGTTCGCAGACCGACTACGGCACCCTGC
GCTCCTACATCCGCTTCGGCATGAACTGGGATTCCCAGTCCACGGCTAACGCGGGTTCGGGCATCGGCTTCTACTTCGAG
CGCGCCTTCATCCAGTTCGCTGGCTTCACCTTCGGTTACACCCAGTCGTTCTTCGACACGGGCATCAACTACGCCTACAC
GCAGCTGTATGCGGGTTCGAACCAGTGGACCACCGCTCTCGCCTACACCGCCCAGTTCGGTAACGGCTTCTCGGCGACCA
TCGCCCTCGAAGACGCCGCCAACCGCATCACCGGCGTGCAGGCTGGCTCGGCCGGCGTGTACAACCCGACCAGCTCGCTC
GGCTATGCCAACTACCAGGCTGGTCAGGAAATCCCTGACATCGTCGGCAACATCCGCCTCGATCAGGCTTGGGGTACGGT
TCAGCTCTCTGCGGCTGCCCATCAGGTCACCGCTCTGAACCCGGTGTACACCGGCACGGGCGCCACCTACCTCGGTCAGA
ACTCGACCGACACCTGGGGCTGGGCCATCGGCGGCGCCGTGGAAATCAAGCTCCCGATGATCGCCCCCGGCGACAGCCTC
TTCATCCAGGCTGGCTATGCTGACGGCGCTCTGAGCTATGTCGGCTTCGCCGGCACCACGCAGGGTCGCGCGACGGGCCT
CGGCTCTCTCGACACCAAGACCACCACCTTCGCGACCGGCGCCTACTACCCGATCGCCGACGCTGTGTGGAACCAGGCCA
CCCGCTCGTACAACACCGAGACGGCTTGGGGCATCCAGGGTCAGTTCCGTCACTTCTGGACCCCGGCGGTTCGCTCGGCC
GTGTTCGGCGGTTACTCTGAGGTCTCCGTGCCCCAGAACACCGTTGGCGCTGTCGACGTGAACATCTGGCAGGTCGGCCT
GAACACCATCTGGTCGCCGGTCAAGAACCTCGACCTCGGCCTCGAAGTGCTCTACTCGAAGGTTGATGGCGGCGCTGCCC
TCGGCACCTACAGCACCGGCACGACCGCTGCCAACGGCGGCGCGACTGCCACGGTCGGCGGCTCCACCGACGTGTGGTCG
GGCGGCTTCCGCGCTCAGCGCAACTTCTGA

Upstream 100 bases:

>100_bases
GTGGTGGCAAGATGCCGCCACCCGTTTTCGCCCACGGAAAAGATCGCGCGCGGAAGATTGAGGTAAATGAAGGGTTTCCA
AGGATGGGTGTGGTATTGGA

Downstream 100 bases:

>100_bases
TCCTCGCGATCATTGGTTTGGAGAACCCCGGCGGGCAACCGCCGGGGTTTTTCGTTTTGGGCCACTCGTCTCACACCTTC
TGGTGGGCTGGTGACGCCGC

Product: outer membrane protein 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MGVAKTCCSCNTPGKRPFPPAFWSVSRLIPGPAFVRWLCDEGGQSPVAPYCVGLVASRWGNRGQDLSLVATSTKRLAPSE
QNLEVTMNMVKSLLLGSVAGLAAVAGAQAADLPVKAKAVEYVKVCSAYGAGFYYIPGTDTCLKIDGYARFDTYINAVGTF
NPNISSVAGTGFNGPGAGAGGYPYKDSDDSSYLTRARAVFGLDARSQTDYGTLRSYIRFGMNWDSQSTANAGSGIGFYFE
RAFIQFAGFTFGYTQSFFDTGINYAYTQLYAGSNQWTTALAYTAQFGNGFSATIALEDAANRITGVQAGSAGVYNPTSSL
GYANYQAGQEIPDIVGNIRLDQAWGTVQLSAAAHQVTALNPVYTGTGATYLGQNSTDTWGWAIGGAVEIKLPMIAPGDSL
FIQAGYADGALSYVGFAGTTQGRATGLGSLDTKTTTFATGAYYPIADAVWNQATRSYNTETAWGIQGQFRHFWTPAVRSA
VFGGYSEVSVPQNTVGAVDVNIWQVGLNTIWSPVKNLDLGLEVLYSKVDGGAALGTYSTGTTAANGGATATVGGSTDVWS
GGFRAQRNF

Sequences:

>Translated_569_residues
MGVAKTCCSCNTPGKRPFPPAFWSVSRLIPGPAFVRWLCDEGGQSPVAPYCVGLVASRWGNRGQDLSLVATSTKRLAPSE
QNLEVTMNMVKSLLLGSVAGLAAVAGAQAADLPVKAKAVEYVKVCSAYGAGFYYIPGTDTCLKIDGYARFDTYINAVGTF
NPNISSVAGTGFNGPGAGAGGYPYKDSDDSSYLTRARAVFGLDARSQTDYGTLRSYIRFGMNWDSQSTANAGSGIGFYFE
RAFIQFAGFTFGYTQSFFDTGINYAYTQLYAGSNQWTTALAYTAQFGNGFSATIALEDAANRITGVQAGSAGVYNPTSSL
GYANYQAGQEIPDIVGNIRLDQAWGTVQLSAAAHQVTALNPVYTGTGATYLGQNSTDTWGWAIGGAVEIKLPMIAPGDSL
FIQAGYADGALSYVGFAGTTQGRATGLGSLDTKTTTFATGAYYPIADAVWNQATRSYNTETAWGIQGQFRHFWTPAVRSA
VFGGYSEVSVPQNTVGAVDVNIWQVGLNTIWSPVKNLDLGLEVLYSKVDGGAALGTYSTGTTAANGGATATVGGSTDVWS
GGFRAQRNF
>Mature_568_residues
GVAKTCCSCNTPGKRPFPPAFWSVSRLIPGPAFVRWLCDEGGQSPVAPYCVGLVASRWGNRGQDLSLVATSTKRLAPSEQ
NLEVTMNMVKSLLLGSVAGLAAVAGAQAADLPVKAKAVEYVKVCSAYGAGFYYIPGTDTCLKIDGYARFDTYINAVGTFN
PNISSVAGTGFNGPGAGAGGYPYKDSDDSSYLTRARAVFGLDARSQTDYGTLRSYIRFGMNWDSQSTANAGSGIGFYFER
AFIQFAGFTFGYTQSFFDTGINYAYTQLYAGSNQWTTALAYTAQFGNGFSATIALEDAANRITGVQAGSAGVYNPTSSLG
YANYQAGQEIPDIVGNIRLDQAWGTVQLSAAAHQVTALNPVYTGTGATYLGQNSTDTWGWAIGGAVEIKLPMIAPGDSLF
IQAGYADGALSYVGFAGTTQGRATGLGSLDTKTTTFATGAYYPIADAVWNQATRSYNTETAWGIQGQFRHFWTPAVRSAV
FGGYSEVSVPQNTVGAVDVNIWQVGLNTIWSPVKNLDLGLEVLYSKVDGGAALGTYSTGTTAANGGATATVGGSTDVWSG
GFRAQRNF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 59853; Mature: 59722

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAKTCCSCNTPGKRPFPPAFWSVSRLIPGPAFVRWLCDEGGQSPVAPYCVGLVASRWG
CCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
NRGQDLSLVATSTKRLAPSEQNLEVTMNMVKSLLLGSVAGLAAVAGAQAADLPVKAKAVE
CCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YVKVCSAYGAGFYYIPGTDTCLKIDGYARFDTYINAVGTFNPNISSVAGTGFNGPGAGAG
HHHHHHHHCCCEEEECCCCCEEEECCCEEHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC
GYPYKDSDDSSYLTRARAVFGLDARSQTDYGTLRSYIRFGMNWDSQSTANAGSGIGFYFE
CCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
RAFIQFAGFTFGYTQSFFDTGINYAYTQLYAGSNQWTTALAYTAQFGNGFSATIALEDAA
HHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCHH
NRITGVQAGSAGVYNPTSSLGYANYQAGQEIPDIVGNIRLDQAWGTVQLSAAAHQVTALN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCEEEEECHHHEEEECC
PVYTGTGATYLGQNSTDTWGWAIGGAVEIKLPMIAPGDSLFIQAGYADGALSYVGFAGTT
CEEECCCCEECCCCCCCCCCEEECCEEEEEEEEECCCCCEEEEECCCCCCHHHEEECCCC
QGRATGLGSLDTKTTTFATGAYYPIADAVWNQATRSYNTETAWGIQGQFRHFWTPAVRSA
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHCCHHHHHH
VFGGYSEVSVPQNTVGAVDVNIWQVGLNTIWSPVKNLDLGLEVLYSKVDGGAALGTYSTG
HHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCC
TTAANGGATATVGGSTDVWSGGFRAQRNF
CCCCCCCCEEEECCCCCCCCCCCEECCCC
>Mature Secondary Structure 
GVAKTCCSCNTPGKRPFPPAFWSVSRLIPGPAFVRWLCDEGGQSPVAPYCVGLVASRWG
CCCCCHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
NRGQDLSLVATSTKRLAPSEQNLEVTMNMVKSLLLGSVAGLAAVAGAQAADLPVKAKAVE
CCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YVKVCSAYGAGFYYIPGTDTCLKIDGYARFDTYINAVGTFNPNISSVAGTGFNGPGAGAG
HHHHHHHHCCCEEEECCCCCEEEECCCEEHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCC
GYPYKDSDDSSYLTRARAVFGLDARSQTDYGTLRSYIRFGMNWDSQSTANAGSGIGFYFE
CCCCCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
RAFIQFAGFTFGYTQSFFDTGINYAYTQLYAGSNQWTTALAYTAQFGNGFSATIALEDAA
HHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCHH
NRITGVQAGSAGVYNPTSSLGYANYQAGQEIPDIVGNIRLDQAWGTVQLSAAAHQVTALN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCEEEEECHHHEEEECC
PVYTGTGATYLGQNSTDTWGWAIGGAVEIKLPMIAPGDSLFIQAGYADGALSYVGFAGTT
CEEECCCCEECCCCCCCCCCEEECCEEEEEEEEECCCCCEEEEECCCCCCHHHEEECCCC
QGRATGLGSLDTKTTTFATGAYYPIADAVWNQATRSYNTETAWGIQGQFRHFWTPAVRSA
CCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHCCHHHHHH
VFGGYSEVSVPQNTVGAVDVNIWQVGLNTIWSPVKNLDLGLEVLYSKVDGGAALGTYSTG
HHCCCCCCCCCCCCCCEEEEEEEEECHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCC
TTAANGGATATVGGSTDVWSGGFRAQRNF
CCCCCCCCEEEECCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]