| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is chaA [C]
Identifier: 158422831
GI number: 158422831
Start: 1349081
End: 1350145
Strand: Direct
Name: chaA [C]
Synonym: AZC_1207
Alternate gene names: 158422831
Gene position: 1349081-1350145 (Clockwise)
Preceding gene: 158422830
Following gene: 158422832
Centisome position: 25.12
GC content: 66.48
Gene sequence:
>1065_bases ATGCCGTTCATCTGGCTCGCTTATTTCTTTCCCCTCGCCGCGCTCGCCCTCGGCCTTGCCGTTTCCGTCCTGCCCGTCCC TTTCACGGGGGGCCTGTCCTTCATCGAGACGGTGCTCCTCATCGGCACCTCCTTTGCGGCGGTCCACCATGCGGAGGGCA TCTCGTCCCGGATCGGCCAGCCCTTCGGCACGCTGATCCTGACCCTGAGCGTCACCGTCATCGAGGTCTCGGTGCTTGTG GCCATGATGCTGAACGGCGAGAACAATCCCGGCGTCGGCCGGGAGGCCGTGCTCTCCACCGTCATGTTCGTCTGCACGGG GGTCGTGGGCGCCTGCCTGCTGGTGGGTGCGCTCCGCCACCGGGAGCAGGAGGTGCGCCAGCAGGGCGTGAACGGCTATC TTTCGGTCATCATCGCCATTTCGGTGCTGTGCCTGCTGCTGCCGCAAAACACCCACGCCGGCCTGATGGGTGCGGTGGAT CCGTTCCAGATTTCCTTCATCATGTGCGGCACGGTGGTGCTCTACGGCGCCTTCCTCTTCATGCAGACGGTGCGCCACCG GGCGGACTTCATGCCGGAGGCGAGCGAGCCCGCCCCGGCGCGGCCGCGCCGTCTCGTGGTGCATATCCCGCTGCTGCTGG CGGCGCTCGGGGGCATCGTTCTTGTCTCGAGCGGGGTAGCTGCCGGCGTCGAGGAACTGCTCGACCGGCTGCATCTGCGC GATCCGGATGCCGTCATCAGCGCCGCCGTGGTGGCGATGCTGCTGCTGCCGGAGACCATCACCGCCATCCGCGCCGCCCG CGCCAACGATCTTCAGCGCAGCATCAACACGGCGCTCGGCTCGGCCCTTGCCACCATCGGCCTCACCATGCCGGCCATGG TGGCGATCAGCGTCTGGGTGGATCGTCCCATCTATCTGGGCATCGAGCCGGAGGACCGGGTGCAGTTGCTGCTGGTGCTG GTGCTGTCCATCGTCAGCTTCGGCACCGGGCGCACCAACCTGCTCAACGGCTTCGTGCATCTCGTGCTGTTCGCCATCTA TGTGATGACGTTGTTCGTGCCGTGA
Upstream 100 bases:
>100_bases GGGCTTTCACCCGGCCGGCCAGGCGCGATTATCCGGGCGAACGGCGGCGGGGCAGGGCGCGCGCCAGAGCGCGCATGCGC GGGATTCTTCGGGGATTTTC
Downstream 100 bases:
>100_bases GCCGGCGAAGCGGCCGTCCACATTGGCGGATGTTCGGGTGGACACCGCGGCGGCACGGTGGCATGTTCCGCCCGACCAAG AAGAGGCTCGCTCCGTGAAA
Product: Ca2+/H+ antiporter
Products: Na (I) [Periplasm]; Ca (II) [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPFIWLAYFFPLAALALGLAVSVLPVPFTGGLSFIETVLLIGTSFAAVHHAEGISSRIGQPFGTLILTLSVTVIEVSVLV AMMLNGENNPGVGREAVLSTVMFVCTGVVGACLLVGALRHREQEVRQQGVNGYLSVIIAISVLCLLLPQNTHAGLMGAVD PFQISFIMCGTVVLYGAFLFMQTVRHRADFMPEASEPAPARPRRLVVHIPLLLAALGGIVLVSSGVAAGVEELLDRLHLR DPDAVISAAVVAMLLLPETITAIRAARANDLQRSINTALGSALATIGLTMPAMVAISVWVDRPIYLGIEPEDRVQLLLVL VLSIVSFGTGRTNLLNGFVHLVLFAIYVMTLFVP
Sequences:
>Translated_354_residues MPFIWLAYFFPLAALALGLAVSVLPVPFTGGLSFIETVLLIGTSFAAVHHAEGISSRIGQPFGTLILTLSVTVIEVSVLV AMMLNGENNPGVGREAVLSTVMFVCTGVVGACLLVGALRHREQEVRQQGVNGYLSVIIAISVLCLLLPQNTHAGLMGAVD PFQISFIMCGTVVLYGAFLFMQTVRHRADFMPEASEPAPARPRRLVVHIPLLLAALGGIVLVSSGVAAGVEELLDRLHLR DPDAVISAAVVAMLLLPETITAIRAARANDLQRSINTALGSALATIGLTMPAMVAISVWVDRPIYLGIEPEDRVQLLLVL VLSIVSFGTGRTNLLNGFVHLVLFAIYVMTLFVP >Mature_353_residues PFIWLAYFFPLAALALGLAVSVLPVPFTGGLSFIETVLLIGTSFAAVHHAEGISSRIGQPFGTLILTLSVTVIEVSVLVA MMLNGENNPGVGREAVLSTVMFVCTGVVGACLLVGALRHREQEVRQQGVNGYLSVIIAISVLCLLLPQNTHAGLMGAVDP FQISFIMCGTVVLYGAFLFMQTVRHRADFMPEASEPAPARPRRLVVHIPLLLAALGGIVLVSSGVAAGVEELLDRLHLRD PDAVISAAVVAMLLLPETITAIRAARANDLQRSINTALGSALATIGLTMPAMVAISVWVDRPIYLGIEPEDRVQLLLVLV LSIVSFGTGRTNLLNGFVHLVLFAIYVMTLFVP
Specific function: Possible cation transporter [H]
COG id: COG0387
COG function: function code P; Ca2+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]
Homologues:
Organism=Escherichia coli, GI1787468, Length=352, Percent_Identity=31.8181818181818, Blast_Score=164, Evalue=9e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004713 - InterPro: IPR004837 [H]
Pfam domain/function: PF01699 Na_Ca_ex [H]
EC number: NA
Molecular weight: Translated: 37663; Mature: 37532
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFIWLAYFFPLAALALGLAVSVLPVPFTGGLSFIETVLLIGTSFAAVHHAEGISSRIGQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PFGTLILTLSVTVIEVSVLVAMMLNGENNPGVGREAVLSTVMFVCTGVVGACLLVGALRH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REQEVRQQGVNGYLSVIIAISVLCLLLPQNTHAGLMGAVDPFQISFIMCGTVVLYGAFLF HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQTVRHRADFMPEASEPAPARPRRLVVHIPLLLAALGGIVLVSSGVAAGVEELLDRLHLR HHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC DPDAVISAAVVAMLLLPETITAIRAARANDLQRSINTALGSALATIGLTMPAMVAISVWV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRPIYLGIEPEDRVQLLLVLVLSIVSFGTGRTNLLNGFVHLVLFAIYVMTLFVP CCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PFIWLAYFFPLAALALGLAVSVLPVPFTGGLSFIETVLLIGTSFAAVHHAEGISSRIGQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PFGTLILTLSVTVIEVSVLVAMMLNGENNPGVGREAVLSTVMFVCTGVVGACLLVGALRH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH REQEVRQQGVNGYLSVIIAISVLCLLLPQNTHAGLMGAVDPFQISFIMCGTVVLYGAFLF HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQTVRHRADFMPEASEPAPARPRRLVVHIPLLLAALGGIVLVSSGVAAGVEELLDRLHLR HHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC DPDAVISAAVVAMLLLPETITAIRAARANDLQRSINTALGSALATIGLTMPAMVAISVWV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRPIYLGIEPEDRVQLLLVLVLSIVSFGTGRTNLLNGFVHLVLFAIYVMTLFVP CCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Cytoplasm]; Proton [Periplasm]; Ca (II) [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: Na (I) [Cytoplasm] + Proton [Periplasm] = Proton [Cytoplasm] + Na (I) [Periplasm] Ca (II) [Cytoplasm] + Proton [Periplasm] = Ca (II) [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]