| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ilvA [H]
Identifier: 158422817
GI number: 158422817
Start: 1335006
End: 1336547
Strand: Direct
Name: ilvA [H]
Synonym: AZC_1193
Alternate gene names: 158422817
Gene position: 1335006-1336547 (Clockwise)
Preceding gene: 158422816
Following gene: 158422819
Centisome position: 24.86
GC content: 66.73
Gene sequence:
>1542_bases GTGCAACGCAGTTCGGGCTCGACGTCAGTGGAAGATTACATCCGGAAGATTCTGGCCGCCCGCGTCTATGACGTCGCCAT CGAAAGCCCGCTCGATCCCATGCGCCGCCTGTCCGGGCGGCTCGGCAGCCCGGTCTTCCTGAAGCGGGAAGATTTGCAGC CGGTCTTCTCGTTCAAGCTGCGCGGTGCCTACAACAAGATGGTGGGGCTGGACGAGGAGGCGCGCGCCCATGGCGTCATC TGCGCGTCCGCGGGCAATCACGCACAGGGCGTGGCGCTGGCGGCGAAGGCGCTCGGCGTCAAGGCGACCATCGTGATGCC GCGCACGACGCCCGACATCAAGGTCCAGGCGGTCAACGCCAATGGCGGCGATGCCGTGCTTCATGGCGACACGTTCGACG AGGCCTATGCCCACGCCAAGACGCTGGAGGCGCAGACCGGCGCCGTCTTCATCCATCCCTATGACGATCCGCAGGTGATC GCGGGGCAGGGCACCATCGGCATGGAACTGATGCGCCAGCATCCCGATCCGCTGGAGGCCATCTTCGTCCAGATCGGCGG CGGCGGCCTTGCGGCCGGTGTCGCGGCCTATGTGAAGTTCCTGCGGCCGGACGTGAAGGTCATCGGCGTCGAGCCGGAGG ATGCCGCCAGCATGACGGCTGCACTCGCCGCGGACGAGCGGGTGAAGCTGAACCAGGTGGGCCTGTTTGCCGATGGCGTC GCGGTGCGCCAGGCGGGCGAGGAGACCTTCCGGCTCTGCCGCCAGCTTCTCGACGGCATGATCACCGTCACAACCGACGA AATCTGCGCCGCCATGAAGGACATCTTCGAGGACACGCGCGCCATTCCCGAGCCTTCCGGCGCCGTCAGCCTTGCGGGCC TGAAGAAATATGTGGAGCAGCACGGCCCATCCCAGCGCGGCCTCATCGCCATCAACAGCGGCGCCAATCTCAATTTCGAC CGCCTGCGCCACATCGCCGAGCGGGCGGAGCTGGGTGAGCGGCGCGAGGCGCTGTTCGCGGTGTCGATCCCGGAGAAGCC GGGCAGCTACCGCCACTTCATCCGCGTGCTGGGCGCCCGCGCCATCACCGAGTTCAACTATCGCTACGCGCCGGCCGGCG AGGCACAGATCTTCGTCGGCGTGCAGCTCACGGGCGGCGAGGCGGAGCGCAAGGCGGTGGCGGATCTGTTGCGCGCCGAG GGCTATGGCGTCATCGACATGAGCGACAACGAAATGGCCAAGCTCCATGTGCGTTACATGGTGGGCGGCCGCACGCCGGA CCTGCCGAACGAGATGGTCTACCGCTTCCAGTTTCCCGAGCGCCCCGGCGCCCTGCTGAAGTTCCTGGAGAGCATGGCCC AGACCTGGAACATCACCATGTTCCATTACCGCAACCATGGCGCGGACTATGGCCGCGTGCTTGCGGGCATCGACGTGCCG CCGCAGGAGCGGGCGGAGTTCGCCGAGCGGCTGACCGCCCTCGATTATCCCTGCTGGGACGAGACCGACAATCCCGCCTA TCGCCTCTTCCTCGCCAACTGA
Upstream 100 bases:
>100_bases AGGGGAGACATTGCTGTTCCGCTTGCCGAAAGCGGTGACGGGGCCGGCCGTTCTGCGCTATCAGCGCGCAGCAGCGGATG GCGCAGGCCGTCCGCTGCCC
Downstream 100 bases:
>100_bases GGCGAGGCAGAGCGCAGGTATCTGGCGGCATCAACCCAAAGAAAAACCCCGCCGGTGCGCCCGGCGGGGTTTTCTTGTTC AGGCCGTCGCGGCGCGTGCA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MQRSSGSTSVEDYIRKILAARVYDVAIESPLDPMRRLSGRLGSPVFLKREDLQPVFSFKLRGAYNKMVGLDEEARAHGVI CASAGNHAQGVALAAKALGVKATIVMPRTTPDIKVQAVNANGGDAVLHGDTFDEAYAHAKTLEAQTGAVFIHPYDDPQVI AGQGTIGMELMRQHPDPLEAIFVQIGGGGLAAGVAAYVKFLRPDVKVIGVEPEDAASMTAALAADERVKLNQVGLFADGV AVRQAGEETFRLCRQLLDGMITVTTDEICAAMKDIFEDTRAIPEPSGAVSLAGLKKYVEQHGPSQRGLIAINSGANLNFD RLRHIAERAELGERREALFAVSIPEKPGSYRHFIRVLGARAITEFNYRYAPAGEAQIFVGVQLTGGEAERKAVADLLRAE GYGVIDMSDNEMAKLHVRYMVGGRTPDLPNEMVYRFQFPERPGALLKFLESMAQTWNITMFHYRNHGADYGRVLAGIDVP PQERAEFAERLTALDYPCWDETDNPAYRLFLAN
Sequences:
>Translated_513_residues MQRSSGSTSVEDYIRKILAARVYDVAIESPLDPMRRLSGRLGSPVFLKREDLQPVFSFKLRGAYNKMVGLDEEARAHGVI CASAGNHAQGVALAAKALGVKATIVMPRTTPDIKVQAVNANGGDAVLHGDTFDEAYAHAKTLEAQTGAVFIHPYDDPQVI AGQGTIGMELMRQHPDPLEAIFVQIGGGGLAAGVAAYVKFLRPDVKVIGVEPEDAASMTAALAADERVKLNQVGLFADGV AVRQAGEETFRLCRQLLDGMITVTTDEICAAMKDIFEDTRAIPEPSGAVSLAGLKKYVEQHGPSQRGLIAINSGANLNFD RLRHIAERAELGERREALFAVSIPEKPGSYRHFIRVLGARAITEFNYRYAPAGEAQIFVGVQLTGGEAERKAVADLLRAE GYGVIDMSDNEMAKLHVRYMVGGRTPDLPNEMVYRFQFPERPGALLKFLESMAQTWNITMFHYRNHGADYGRVLAGIDVP PQERAEFAERLTALDYPCWDETDNPAYRLFLAN >Mature_513_residues MQRSSGSTSVEDYIRKILAARVYDVAIESPLDPMRRLSGRLGSPVFLKREDLQPVFSFKLRGAYNKMVGLDEEARAHGVI CASAGNHAQGVALAAKALGVKATIVMPRTTPDIKVQAVNANGGDAVLHGDTFDEAYAHAKTLEAQTGAVFIHPYDDPQVI AGQGTIGMELMRQHPDPLEAIFVQIGGGGLAAGVAAYVKFLRPDVKVIGVEPEDAASMTAALAADERVKLNQVGLFADGV AVRQAGEETFRLCRQLLDGMITVTTDEICAAMKDIFEDTRAIPEPSGAVSLAGLKKYVEQHGPSQRGLIAINSGANLNFD RLRHIAERAELGERREALFAVSIPEKPGSYRHFIRVLGARAITEFNYRYAPAGEAQIFVGVQLTGGEAERKAVADLLRAE GYGVIDMSDNEMAKLHVRYMVGGRTPDLPNEMVYRFQFPERPGALLKFLESMAQTWNITMFHYRNHGADYGRVLAGIDVP PQERAEFAERLTALDYPCWDETDNPAYRLFLAN
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=303, Percent_Identity=34.6534653465347, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI33469958, Length=318, Percent_Identity=30.188679245283, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI19923959, Length=318, Percent_Identity=28.3018867924528, Blast_Score=90, Evalue=5e-18, Organism=Escherichia coli, GI1790207, Length=511, Percent_Identity=56.5557729941292, Blast_Score=546, Evalue=1e-156, Organism=Escherichia coli, GI1789505, Length=326, Percent_Identity=36.5030674846626, Blast_Score=184, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71991565, Length=319, Percent_Identity=34.4827586206897, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17537387, Length=342, Percent_Identity=31.2865497076023, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17508781, Length=280, Percent_Identity=31.0714285714286, Blast_Score=127, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6320930, Length=514, Percent_Identity=50.7782101167315, Blast_Score=494, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6322631, Length=301, Percent_Identity=36.2126245847176, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319788, Length=244, Percent_Identity=25.4098360655738, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI21355833, Length=327, Percent_Identity=32.7217125382263, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24645328, Length=254, Percent_Identity=30.7086614173228, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56048; Mature: 56048
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSSGSTSVEDYIRKILAARVYDVAIESPLDPMRRLSGRLGSPVFLKREDLQPVFSFKL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCHHHHEEE RGAYNKMVGLDEEARAHGVICASAGNHAQGVALAAKALGVKATIVMPRTTPDIKVQAVNA CCCHHHHCCCCCHHHHCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC NGGDAVLHGDTFDEAYAHAKTLEAQTGAVFIHPYDDPQVIAGQGTIGMELMRQHPDPLEA CCCCEEEECCCHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCCHHHHHHHCCCCHHHE IFVQIGGGGLAAGVAAYVKFLRPDVKVIGVEPEDAASMTAALAADERVKLNQVGLFADGV EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCEEECCH AVRQAGEETFRLCRQLLDGMITVTTDEICAAMKDIFEDTRAIPEPSGAVSLAGLKKYVEQ HHHHCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH HGPSQRGLIAINSGANLNFDRLRHIAERAELGERREALFAVSIPEKPGSYRHFIRVLGAR CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH AITEFNYRYAPAGEAQIFVGVQLTGGEAERKAVADLLRAEGYGVIDMSDNEMAKLHVRYM HHHHCCCEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE VGGRTPDLPNEMVYRFQFPERPGALLKFLESMAQTWNITMFHYRNHGADYGRVLAGIDVP ECCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHEEECCCCC PQERAEFAERLTALDYPCWDETDNPAYRLFLAN HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MQRSSGSTSVEDYIRKILAARVYDVAIESPLDPMRRLSGRLGSPVFLKREDLQPVFSFKL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCCHHHHEEE RGAYNKMVGLDEEARAHGVICASAGNHAQGVALAAKALGVKATIVMPRTTPDIKVQAVNA CCCHHHHCCCCCHHHHCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEEC NGGDAVLHGDTFDEAYAHAKTLEAQTGAVFIHPYDDPQVIAGQGTIGMELMRQHPDPLEA CCCCEEEECCCHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCCHHHHHHHCCCCHHHE IFVQIGGGGLAAGVAAYVKFLRPDVKVIGVEPEDAASMTAALAADERVKLNQVGLFADGV EEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCEEECCH AVRQAGEETFRLCRQLLDGMITVTTDEICAAMKDIFEDTRAIPEPSGAVSLAGLKKYVEQ HHHHCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH HGPSQRGLIAINSGANLNFDRLRHIAERAELGERREALFAVSIPEKPGSYRHFIRVLGAR CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH AITEFNYRYAPAGEAQIFVGVQLTGGEAERKAVADLLRAEGYGVIDMSDNEMAKLHVRYM HHHHCCCEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEE VGGRTPDLPNEMVYRFQFPERPGALLKFLESMAQTWNITMFHYRNHGADYGRVLAGIDVP ECCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHEEECCCCC PQERAEFAERLTALDYPCWDETDNPAYRLFLAN HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA