| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yoaV [H]
Identifier: 158422816
GI number: 158422816
Start: 1333847
End: 1334890
Strand: Direct
Name: yoaV [H]
Synonym: AZC_1192
Alternate gene names: 158422816
Gene position: 1333847-1334890 (Clockwise)
Preceding gene: 158422813
Following gene: 158422817
Centisome position: 24.84
GC content: 70.69
Gene sequence:
>1044_bases ATGGCGAGAGATAGGCCGGAATTTTCCCGCTCCACGGCATATCAATGGGTGAGTTTGCAGCGCAGCAATGCGGAGTTCCC CATGACCACTGCCGTTCAAGGCCGGGCCACAGCCCCCGTTTCCACCGCCGCGCAGTCCGCGCCCTGGCTGGTGGCCATGG TGCTGTTCTGGGGCCTGAGCTGGCCGGCCATGAAGCTGGCGCTGGGCACGGTGCCGCCGCTGTGGCTCGCCACTTTCCGC TTTGGTAGTGCCGCCGCCTCCCTCTTCGCGCTTCTCGCCGTGCGCGGCGGCGTGCGCTTCCCCCCGCGCGCCGACTGGCC GATCGTCTTCAGCATCGGCGGCCTGCAGATGATGGCCTTCACCGGCCTCGGCCTCATCGCCATGCAATATACGGACGCGA GCCGCGCCGCCGTGCTCGGCTACACCACCCCGCTCTGGGCCATGCTCGCGGCCTGGATGCTGCTCGGCCAGCGGCCCACG GGCCGGCAGGGACTCGCGCTGGCGGTGGGCATGGCCGGCGTCGCGCTCATCTGCTCGCCCTTCGAGATGGACTGGCGGCG CCCCGAGGTCGTGGGCGGCAACGTGCTGCTGCTCACCGCCGCCATCTGTTGGTCGCTGGTCATCCTGCATGTGCGGCGCC ACCGCTTCCTGTCGCGGCCCATCGAGCTCGCCCCGTGGCAGATGCTCTTTGCCGCCGTGCCGCTGGGCCTGATGGCGCTT GTCACCGAGGGGCCGCCCACGCACATCGGCTGGTCGCTCGAACTGGTGGGGCTGCTCGCTTACATCGGGCCGCTCGCCAC CTCCGCCTGCTTCGTCATCTCCACCGAGCACGGCCGCCGCATCAGCACCTTCGCCATGTCCAACATCACCATGGGCGTGC CGATCATCGGCGCGCTGTCCTCGGCCCTCCTCCTGGGCGAGAGGCTCACGGTGCCGCTGTCGCTGGGGCTGGCGCTCATC GTCGTCGGAACGGGCCTCGCGGCGCTGGCTGGCCGCCGCAAGACCCCGGCCGTCGCCCCTGCCGGTGTTGGCGCGCGCGC CTGA
Upstream 100 bases:
>100_bases AGGATGCGAAGGCTGGCGGCATCAAGGGATTCGCGGTCGGTAGGCATGATCATCCTGATGGCTGGCCTAATGCGGATAAA ATTACCCGCCTTGCCCGGAA
Downstream 100 bases:
>100_bases TCCGCGCGGCGGGGCAGGGGAGACATTGCTGTTCCGCTTGCCGAAAGCGGTGACGGGGCCGGCCGTTCTGCGCTATCAGC GCGCAGCAGCGGATGGCGCA
Product: drug/metabolite transporter (DMT) permease superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MARDRPEFSRSTAYQWVSLQRSNAEFPMTTAVQGRATAPVSTAAQSAPWLVAMVLFWGLSWPAMKLALGTVPPLWLATFR FGSAAASLFALLAVRGGVRFPPRADWPIVFSIGGLQMMAFTGLGLIAMQYTDASRAAVLGYTTPLWAMLAAWMLLGQRPT GRQGLALAVGMAGVALICSPFEMDWRRPEVVGGNVLLLTAAICWSLVILHVRRHRFLSRPIELAPWQMLFAAVPLGLMAL VTEGPPTHIGWSLELVGLLAYIGPLATSACFVISTEHGRRISTFAMSNITMGVPIIGALSSALLLGERLTVPLSLGLALI VVGTGLAALAGRRKTPAVAPAGVGARA
Sequences:
>Translated_347_residues MARDRPEFSRSTAYQWVSLQRSNAEFPMTTAVQGRATAPVSTAAQSAPWLVAMVLFWGLSWPAMKLALGTVPPLWLATFR FGSAAASLFALLAVRGGVRFPPRADWPIVFSIGGLQMMAFTGLGLIAMQYTDASRAAVLGYTTPLWAMLAAWMLLGQRPT GRQGLALAVGMAGVALICSPFEMDWRRPEVVGGNVLLLTAAICWSLVILHVRRHRFLSRPIELAPWQMLFAAVPLGLMAL VTEGPPTHIGWSLELVGLLAYIGPLATSACFVISTEHGRRISTFAMSNITMGVPIIGALSSALLLGERLTVPLSLGLALI VVGTGLAALAGRRKTPAVAPAGVGARA >Mature_346_residues ARDRPEFSRSTAYQWVSLQRSNAEFPMTTAVQGRATAPVSTAAQSAPWLVAMVLFWGLSWPAMKLALGTVPPLWLATFRF GSAAASLFALLAVRGGVRFPPRADWPIVFSIGGLQMMAFTGLGLIAMQYTDASRAAVLGYTTPLWAMLAAWMLLGQRPTG RQGLALAVGMAGVALICSPFEMDWRRPEVVGGNVLLLTAAICWSLVILHVRRHRFLSRPIELAPWQMLFAAVPLGLMALV TEGPPTHIGWSLELVGLLAYIGPLATSACFVISTEHGRRISTFAMSNITMGVPIIGALSSALLLGERLTVPLSLGLALIV VGTGLAALAGRRKTPAVAPAGVGARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87082351, Length=310, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 36883; Mature: 36752
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDRPEFSRSTAYQWVSLQRSNAEFPMTTAVQGRATAPVSTAAQSAPWLVAMVLFWGLS CCCCCCCHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCCC WPAMKLALGTVPPLWLATFRFGSAAASLFALLAVRGGVRFPPRADWPIVFSIGGLQMMAF CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHH TGLGLIAMQYTDASRAAVLGYTTPLWAMLAAWMLLGQRPTGRQGLALAVGMAGVALICSP HCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECC FEMDWRRPEVVGGNVLLLTAAICWSLVILHVRRHRFLSRPIELAPWQMLFAAVPLGLMAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VTEGPPTHIGWSLELVGLLAYIGPLATSACFVISTEHGRRISTFAMSNITMGVPIIGALS HCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCEECCHHHHHHH SALLLGERLTVPLSLGLALIVVGTGLAALAGRRKTPAVAPAGVGARA HHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARDRPEFSRSTAYQWVSLQRSNAEFPMTTAVQGRATAPVSTAAQSAPWLVAMVLFWGLS CCCCCCHHHHHHHHHEEEECCCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCCC WPAMKLALGTVPPLWLATFRFGSAAASLFALLAVRGGVRFPPRADWPIVFSIGGLQMMAF CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHH TGLGLIAMQYTDASRAAVLGYTTPLWAMLAAWMLLGQRPTGRQGLALAVGMAGVALICSP HCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECC FEMDWRRPEVVGGNVLLLTAAICWSLVILHVRRHRFLSRPIELAPWQMLFAAVPLGLMAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VTEGPPTHIGWSLELVGLLAYIGPLATSACFVISTEHGRRISTFAMSNITMGVPIIGALS HCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEECCCCEECCHHHHHHH SALLLGERLTVPLSLGLALIVVGTGLAALAGRRKTPAVAPAGVGARA HHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]