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The map label for this gene is asnC [H]

Identifier: 158422815

GI number: 158422815

Start: 1333296

End: 1333793

Strand: Reverse

Name: asnC [H]

Synonym: AZC_1191

Alternate gene names: 158422815

Gene position: 1333793-1333296 (Counterclockwise)

Preceding gene: 158422818

Following gene: 158422814

Centisome position: 24.84

GC content: 63.65

Gene sequence:

>498_bases
ATGCCTACCGACCGCGAATCCCTTGATGCCGCCAGCCTTCGCATCCTCGACGCCCTCCAGGCGGACGCGGAAATCAGCAA
TGCGGACCTGGCGGAAAAGGTGGGCCTCTCCCCCTCGCCCTGCTGGCGACGGGTGGCGGACATGAAGGCCAGAGGCGTCA
TCCGCGGCTCCGTTGCGCTGGTGGACCCGGTAGCGCTCGGCCTTGCGGTGAACGTCTTCGTCCATGTCTCGCTGAAGCAG
CAGGACAAGCGTTCGCTGGAGATCTTCGATGCCGCCATCCGCGAGCGGCCTGAGGTCATGGAGTGCTATCTGATGAGCGG
GGAATCCGACTACATGCTGCGCGTGGTGGTGGAAGATCTCATCAAGTATCAGCAACTCATGGTGGAGGTGCTGACGCGCA
TTCCGGTGGTCGCCAACATCCGCTCGAGCTTTGCGCTGGCGCAGGTCAAATACACCACGGCGCTGCCGACCGGACACCTT
GCGGGCCACGAGCGTTAG

Upstream 100 bases:

>100_bases
CATTGATATGCCGTGGAGCGGGAAAATTCCGGCCTATCTCTCGCCATTTCCGGGCAAGGCGGGTAATTTTATCCGCATTA
GGCCAGCCATCAGGATGATC

Downstream 100 bases:

>100_bases
CCTCATCTGCGCGGTGGCGGGATATTTACCAGTCCTTCACCCTCTTTGGCGCGGAACTGCATCGAAGTCCGTTCACAGGC
ACGGGCGAACATGCCACAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPTDRESLDAASLRILDALQADAEISNADLAEKVGLSPSPCWRRVADMKARGVIRGSVALVDPVALGLAVNVFVHVSLKQ
QDKRSLEIFDAAIRERPEVMECYLMSGESDYMLRVVVEDLIKYQQLMVEVLTRIPVVANIRSSFALAQVKYTTALPTGHL
AGHER

Sequences:

>Translated_165_residues
MPTDRESLDAASLRILDALQADAEISNADLAEKVGLSPSPCWRRVADMKARGVIRGSVALVDPVALGLAVNVFVHVSLKQ
QDKRSLEIFDAAIRERPEVMECYLMSGESDYMLRVVVEDLIKYQQLMVEVLTRIPVVANIRSSFALAQVKYTTALPTGHL
AGHER
>Mature_164_residues
PTDRESLDAASLRILDALQADAEISNADLAEKVGLSPSPCWRRVADMKARGVIRGSVALVDPVALGLAVNVFVHVSLKQQ
DKRSLEIFDAAIRERPEVMECYLMSGESDYMLRVVVEDLIKYQQLMVEVLTRIPVVANIRSSFALAQVKYTTALPTGHLA
GHER

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=149, Percent_Identity=36.241610738255, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=37.3333333333333, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18219; Mature: 18088

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDRESLDAASLRILDALQADAEISNADLAEKVGLSPSPCWRRVADMKARGVIRGSVAL
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEECCCHHH
VDPVALGLAVNVFVHVSLKQQDKRSLEIFDAAIRERPEVMECYLMSGESDYMLRVVVEDL
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH
IKYQQLMVEVLTRIPVVANIRSSFALAQVKYTTALPTGHLAGHER
HHHHHHHHHHHHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PTDRESLDAASLRILDALQADAEISNADLAEKVGLSPSPCWRRVADMKARGVIRGSVAL
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEECCCHHH
VDPVALGLAVNVFVHVSLKQQDKRSLEIFDAAIRERPEVMECYLMSGESDYMLRVVVEDL
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH
IKYQQLMVEVLTRIPVVANIRSSFALAQVKYTTALPTGHLAGHER
HHHHHHHHHHHHHCCHHHHHHHHHHHHHEEHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]