| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yfhA [C]
Identifier: 158422791
GI number: 158422791
Start: 1302958
End: 1303524
Strand: Reverse
Name: yfhA [C]
Synonym: AZC_1167
Alternate gene names: 158422791
Gene position: 1303524-1302958 (Counterclockwise)
Preceding gene: 158422792
Following gene: 158422790
Centisome position: 24.28
GC content: 62.08
Gene sequence:
>567_bases ATGGAGGTATCTATCCTTGACGATCGGGGTCCAAGCCGGTCCTCTCGGATGCATGCGAACCAACGATTCTGCCCGGAACC GGGTACTGAATCCGTATGTGCAGAAACGATGGATCTCTCTTTGGCGACCTGCGATTTGATGGGCATGATGCCAACCCGGC CTCACGCCTCGCCGTTCATGGGGGGCGCCCGTGTGATCGAAACGAGCCCGCTTCTCATCGTTGACGACGAGCCGGAATAT CTCGACGAGATCCTCGAGGCGCTTGCGTTCGAGGGTGTCTCCGCCATTTCCGCATCCAACGGCATCGACGCGGTCCAGAC CCTGCGCCGCTGCCCGGACATCCGCCTCGTGGTCACCGATATCCGCATGCCCGACATGGACGGCATCGCGCTGATGGAAG CGGCGCGCCAGGAATTCTCCGATCGCGACCTCCAGTTCATCGTGGTCACGGGCCATGCCGCCAAGGCGGACATCGAGCGC GCGAAAGCCGCCGGCGTGATCGATTGCCTGACGAAACCGCTGTCCATGGATGCCCTACAGCGCGCCCTCAAAGCCTTGCC GGTGTAA
Upstream 100 bases:
>100_bases CGGCGGGAAACTGACCTAGAGACATACCTCCCGCCCTGGCTGCATTCCCCAAAATCACGCGCGCTGATACACAAAAACCA TCTCCGGCGATGCTTCCGTA
Downstream 100 bases:
>100_bases TCATGCGGCTGGCCGCCACCCGGAGAGCGATCAGCGAGATATTCGACGGTTCCTATCAACTCGCCATCAATCTGTTCGTG ATCTTCCTCCTGATCGCGGC
Product: response regulator receiver
Products: NA
Alternate protein names: Response Regulator; Response Regulator Receiver; Two-Component Response Regulator; Two Component; HD Domain Protein
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER AKAAGVIDCLTKPLSMDALQRALKALPV
Sequences:
>Translated_188_residues MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER AKAAGVIDCLTKPLSMDALQRALKALPV >Mature_188_residues MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFMGGARVIETSPLLIVDDEPEY LDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTDIRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIER AKAAGVIDCLTKPLSMDALQRALKALPV
Specific function: Probable Member Of A Two-Component Regulatory System Yfha/Yfhk. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788905, Length=113, Percent_Identity=35.3982300884956, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.-
Molecular weight: Translated: 20417; Mature: 20417
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFM CCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGARVIETSPLLIVDDEPEYLDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTD CCCEEEECCCEEEECCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCEEEEEE IRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIERAKAAGVIDCLTKPLSMDALQ CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RALKALPV HHHHHCCC >Mature Secondary Structure MEVSILDDRGPSRSSRMHANQRFCPEPGTESVCAETMDLSLATCDLMGMMPTRPHASPFM CCEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGARVIETSPLLIVDDEPEYLDEILEALAFEGVSAISASNGIDAVQTLRRCPDIRLVVTD CCCEEEECCCEEEECCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHCCCCEEEEEE IRMPDMDGIALMEAARQEFSDRDLQFIVVTGHAAKADIERAKAAGVIDCLTKPLSMDALQ CCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHH RALKALPV HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA