Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 158422787

GI number: 158422787

Start: 1297389

End: 1298636

Strand: Direct

Name: selD [H]

Synonym: AZC_1163

Alternate gene names: 158422787

Gene position: 1297389-1298636 (Clockwise)

Preceding gene: 158422786

Following gene: 158422788

Centisome position: 24.16

GC content: 68.59

Gene sequence:

>1248_bases
GTGGTGCTGATCCTGATCGCCAATGGGTCAAAATCCCTCTCCCCCAAACCGGCCTGCGCGACAGGCTCCCTCTCCCGCTT
GCGGGGGAGGGGAGGGGTGGGGAGGGGACAGAACGCGCCCTTCGTTTCTCGCCTGCCGCGCCCATATCAAGTGGCAGCTC
ATCCGCTTTCCCGTTCAACGGAATGTCCCATGTCCCAGCCTGTGACCGAACAGCCCTTCCGCCTCACCAGCCTCGCCCAC
GGCGGCGGCTGCGGGTGCAAGCTCGCGCCTTCCGTGCTGCAGGAACTGCTGGCCGGCGCGCCGGCGGCGCAGCCCTATGC
GCAGCTTCTGGTGGGGATGGAGACGGGCGACGACGCGGCGGTCTGGGATCTCGATGGCGAGACCTGCATCGTCGCCACCA
CGGACTTCTTCATGCCGGTGGTGGATGATCCGGACCATTTCGGCCGCATCGCCGCCACCAACGCCATCTCCGATGTCTAC
GCCATGGGCGGCACGCCCATCATGGCGCTCGCCATCCTCGGCATGCCGCTCGGCAAGGTGGACACGGGCATCGTGCGTAA
GATCCTCGAAGGGGGCAGCGCTGCCTGCGCCGCAGCCGGCATTCCGGTGGCGGGCGGGCACTCCATCGACAGCGTGGAGC
CCATCTATGGGCTCGCGGTCATCGGCACGGTGCGCAAGGCGCTGGTCCGGCGCAATGCGGATGCCAGGCCCGGCGACGCG
CTGATCCTCACCAAGGCTGTGGGCGTCGGCGTCTATTCGGCGGCCTTCAAGAAGGAGGCGCTGTCCTCCGACGCGTATGA
CGAGATGATCGCCTCCACCACCCTGCTCAACAAGGTGGGCAGCGCGCTCGCCAAGGACAGCGCCGTTCATGCCATGACCG
ACGTCACCGGCTTCGGCGTCATTGGCCATGCGCTGGAGGTGGCGCGCGGCTCGAAGCTCGCCGTCACCATCGAGGCCGAC
CGCGTGCCGCTCATGGCCCATGCGGAAGCCCTCGTGCGGCAGGGTTTCGTGACCGGTGCCTCGATCCGCAACTGGGCGAG
CTACGGCGCAGAGGCGCGCCTGCCGGCCGATTTTCCCGAATGGCGCCGCCATCTCCTCACCGATCCGCAGACCTCTGGCG
GTCTCCTCGTCTCCTGCGCGCCGGAAGAGGCGGACCGGCTGGTGGAGGAGATCCAGGCGGCCGGATATCCGAACGCCCGC
CGCATCGGCGCCGTGACTGAGGGGGCGGTGGGGCTCACGGTCGCCTGA

Upstream 100 bases:

>100_bases
TGAAATCTCGGCCTGAGGGGGACTGGGGCGTTTCGCGAGCCGAATGCCCCCTCCCTAGCCCTCCCCCGCGAGCGGGAGAG
GGGACGGAGCCCGACTGAGA

Downstream 100 bases:

>100_bases
CGCGGCAGAGTGTACCGGGGGGCGTACCGGCGTAGGCGGGAACGGCCAGCGCTGCAGTGACGTTACTTCAGCAATGGAGG
ACGTCATCCCATGACCCGAG

Product: selenide water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVLILIANGSKSLSPKPACATGSLSRLRGRGGVGRGQNAPFVSRLPRPYQVAAHPLSRSTECPMSQPVTEQPFRLTSLAH
GGGCGCKLAPSVLQELLAGAPAAQPYAQLLVGMETGDDAAVWDLDGETCIVATTDFFMPVVDDPDHFGRIAATNAISDVY
AMGGTPIMALAILGMPLGKVDTGIVRKILEGGSAACAAAGIPVAGGHSIDSVEPIYGLAVIGTVRKALVRRNADARPGDA
LILTKAVGVGVYSAAFKKEALSSDAYDEMIASTTLLNKVGSALAKDSAVHAMTDVTGFGVIGHALEVARGSKLAVTIEAD
RVPLMAHAEALVRQGFVTGASIRNWASYGAEARLPADFPEWRRHLLTDPQTSGGLLVSCAPEEADRLVEEIQAAGYPNAR
RIGAVTEGAVGLTVA

Sequences:

>Translated_415_residues
MVLILIANGSKSLSPKPACATGSLSRLRGRGGVGRGQNAPFVSRLPRPYQVAAHPLSRSTECPMSQPVTEQPFRLTSLAH
GGGCGCKLAPSVLQELLAGAPAAQPYAQLLVGMETGDDAAVWDLDGETCIVATTDFFMPVVDDPDHFGRIAATNAISDVY
AMGGTPIMALAILGMPLGKVDTGIVRKILEGGSAACAAAGIPVAGGHSIDSVEPIYGLAVIGTVRKALVRRNADARPGDA
LILTKAVGVGVYSAAFKKEALSSDAYDEMIASTTLLNKVGSALAKDSAVHAMTDVTGFGVIGHALEVARGSKLAVTIEAD
RVPLMAHAEALVRQGFVTGASIRNWASYGAEARLPADFPEWRRHLLTDPQTSGGLLVSCAPEEADRLVEEIQAAGYPNAR
RIGAVTEGAVGLTVA
>Mature_415_residues
MVLILIANGSKSLSPKPACATGSLSRLRGRGGVGRGQNAPFVSRLPRPYQVAAHPLSRSTECPMSQPVTEQPFRLTSLAH
GGGCGCKLAPSVLQELLAGAPAAQPYAQLLVGMETGDDAAVWDLDGETCIVATTDFFMPVVDDPDHFGRIAATNAISDVY
AMGGTPIMALAILGMPLGKVDTGIVRKILEGGSAACAAAGIPVAGGHSIDSVEPIYGLAVIGTVRKALVRRNADARPGDA
LILTKAVGVGVYSAAFKKEALSSDAYDEMIASTTLLNKVGSALAKDSAVHAMTDVTGFGVIGHALEVARGSKLAVTIEAD
RVPLMAHAEALVRQGFVTGASIRNWASYGAEARLPADFPEWRRHLLTDPQTSGGLLVSCAPEEADRLVEEIQAAGYPNAR
RIGAVTEGAVGLTVA

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=381, Percent_Identity=28.6089238845144, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI15011844, Length=390, Percent_Identity=28.4615384615385, Blast_Score=108, Evalue=1e-23,
Organism=Escherichia coli, GI1788062, Length=320, Percent_Identity=47.1875, Blast_Score=291, Evalue=7e-80,
Organism=Caenorhabditis elegans, GI17543426, Length=369, Percent_Identity=27.6422764227642, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24653602, Length=403, Percent_Identity=30.0248138957816, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24653604, Length=403, Percent_Identity=30.0248138957816, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI28574119, Length=379, Percent_Identity=26.9129287598945, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI28574118, Length=283, Percent_Identity=28.6219081272085, Blast_Score=96, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 42883; Mature: 42883

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLILIANGSKSLSPKPACATGSLSRLRGRGGVGRGQNAPFVSRLPRPYQVAAHPLSRST
CEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCC
ECPMSQPVTEQPFRLTSLAHGGGCGCKLAPSVLQELLAGAPAAQPYAQLLVGMETGDDAA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHEECCCCCCCE
VWDLDGETCIVATTDFFMPVVDDPDHFGRIAATNAISDVYAMGGTPIMALAILGMPLGKV
EEECCCCEEEEEECCCEEECCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
DTGIVRKILEGGSAACAAAGIPVAGGHSIDSVEPIYGLAVIGTVRKALVRRNADARPGDA
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCE
LILTKAVGVGVYSAAFKKEALSSDAYDEMIASTTLLNKVGSALAKDSAVHAMTDVTGFGV
EEEEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IGHALEVARGSKLAVTIEADRVPLMAHAEALVRQGFVTGASIRNWASYGAEARLPADFPE
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH
WRRHLLTDPQTSGGLLVSCAPEEADRLVEEIQAAGYPNARRIGAVTEGAVGLTVA
HHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MVLILIANGSKSLSPKPACATGSLSRLRGRGGVGRGQNAPFVSRLPRPYQVAAHPLSRST
CEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCHHHHCCCCCCCC
ECPMSQPVTEQPFRLTSLAHGGGCGCKLAPSVLQELLAGAPAAQPYAQLLVGMETGDDAA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHEECCCCCCCE
VWDLDGETCIVATTDFFMPVVDDPDHFGRIAATNAISDVYAMGGTPIMALAILGMPLGKV
EEECCCCEEEEEECCCEEECCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
DTGIVRKILEGGSAACAAAGIPVAGGHSIDSVEPIYGLAVIGTVRKALVRRNADARPGDA
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCE
LILTKAVGVGVYSAAFKKEALSSDAYDEMIASTTLLNKVGSALAKDSAVHAMTDVTGFGV
EEEEEHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IGHALEVARGSKLAVTIEADRVPLMAHAEALVRQGFVTGASIRNWASYGAEARLPADFPE
HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHH
WRRHLLTDPQTSGGLLVSCAPEEADRLVEEIQAAGYPNARRIGAVTEGAVGLTVA
HHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA