| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yaaU [H]
Identifier: 158422765
GI number: 158422765
Start: 1271403
End: 1272926
Strand: Reverse
Name: yaaU [H]
Synonym: AZC_1141
Alternate gene names: 158422765
Gene position: 1272926-1271403 (Counterclockwise)
Preceding gene: 158422768
Following gene: 158422762
Centisome position: 23.71
GC content: 67.91
Gene sequence:
>1524_bases ATGCGTACCGAAACCAGCGACAGCGCCCACAGCCACGCCACACGGCCGCACGGCCAGTCCCTGCACGGCACGCCCGAGGA CGTGCAGCGGGTGCAGGACTATATCGACGAGACGCCCATCTGGCGCGACGGCACGGTCGTTCCGGCGGCGCCCATGACGG CCATGCAGTGGCGGATCTGGAGCCTCGCCGCCGCCGGCAAGTTCTTCGAGGGTCTCGTCGTGTTCATGACCGGCGTCGCC CTGCCGCTCATGGGCGCCGAGTTCGGCATGACGCCGCTCCAGCATGGCCTCGTCAGCGCCGCCACCCTGTTCGGCATCCT CGTGGGTGCGCTGGCGCTGGGCGGCCTTGCCGACCAGTTCGGCCGCAAGCCCATGTTCGTGTTCGAGATGGCGCTGTTCA TCCTGTTTCTCGGCCTGCTCGCCGCAGCGCCGAATTTCAGCTGGATGCTCATCTTCCTCTTCGGCATCGGTCTGGCGCTC GGCTGCGATTATCCGACAGCCCATCTCGTCATCTCGGAAAGCATCCCGAGTTCCTCGCGCGGCCGGCTCGTGCTCGGCGC CTTCTCCTTCCAGGCGCTGGGCGCGCTCAGCGGAACGGCCGTCGGCTATCTGGTGCTCGTCTTCGATCCGACCCTCAGCG CCTGGCGGCTCATGTACGCCGTGGCCATCGTCCCCGCGCTGATCGTGCTCGCCGGCCGCTTCTTCATCACCGAGAGCAGC CACTGGCTGCTGGCGAAGGGCCGGGTGCCGGAGGCCGAGCACAATCTCAAGCGGCTGCTGACCCGCCAGCCGCGCTACCC CAAGCACATCCGTCTCAAGGGCCTGCACGAGCCCGGCCTCGCCCGACCGGAAAGCCACCTTCTGGTGCTGTTCCGCCGCA AGAACCTGCGGGCGACGCTGTTCGCCTCCCTGCCGTGGTTCCTTCAGGACCTCGGCACCTACGGCATCGGCATCTTCACC CCCACCATCCTTGCCGCCGCACTGGGGGCCGACACCTCCATCCGCATGCCCGGTGTCGCCGGTCTCATTGCGGGTGACAT GCGCGCCGCCCAGGGCGCGGCCTTCATCGACATCCTTCTGATCGTCGGCATGGTGGCGGCAGTGATGCTGGCGGACAAGG TGGGCCGCGTGCTGTTGCAGGTGTTCGGCTTCCTCGGCTGCGCCGCCGGCCTGCTGCTCGCCTCGTTCCACGACGCCTTC ACCGGCCCGGCGCAGATCGCGCTCATCTATGCCGGCTTCATGCTTTTCAACTTCATGTGCAACATGGGCCCCAACGCCCA GACCTACCTGCTGGCAGGCGAGGTGTTTCCCACCCACATCCGCGGGATCGGGGCGGGCTTTGCCGCCGCCTTCGGCAAGG TGGGGGCGGTGCTGACCGCCTTCCTCTTCCCCATCCTGCTCAGCACGCTCGGCACGTCGAACCTGCTCTACATGCTGGTG GCGACCTCGCTCCTCGGGGCGCTCATCACCTGGCTGCTGCGGATCGAGACCAAGGGCCGCCGGCTCGACGACGTGGGCCT GTGA
Upstream 100 bases:
>100_bases TCCCACGCATGCTTATGGTTTAGAAGCGCGATTAGGTAAGCTGTGACCGTCACACGCCGTTCATGGGTGACGGAGAGGGT GCGGGCCGCGGAGATCGAGC
Downstream 100 bases:
>100_bases CGGCGCGCGGGGACATCCCGCGCGCCGTCGATCTCTCGAAAACGATGGAAGTTTCGCGCCTCAGCCCCAGCGCTCGCCGA CCACCTGCCAGTTCACGCGG
Product: glucose transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV ATSLLGALITWLLRIETKGRRLDDVGL
Sequences:
>Translated_507_residues MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV ATSLLGALITWLLRIETKGRRLDDVGL >Mature_507_residues MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIWSLAAAGKFFEGLVVFMTGVA LPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQFGRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLAL GCDYPTAHLVISESIPSSSRGRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATLFASLPWFLQDLGTYGIGIFT PTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILLIVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAF TGPAQIALIYAGFMLFNFMCNMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV ATSLLGALITWLLRIETKGRRLDDVGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=528, Percent_Identity=22.9166666666667, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI213021148, Length=460, Percent_Identity=23.4782608695652, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI166064021, Length=439, Percent_Identity=25.9681093394077, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI166197673, Length=414, Percent_Identity=24.8792270531401, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4506999, Length=406, Percent_Identity=23.8916256157635, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI4507005, Length=224, Percent_Identity=27.2321428571429, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI24497490, Length=332, Percent_Identity=23.1927710843373, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI203098995, Length=243, Percent_Identity=29.2181069958848, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI302148518, Length=373, Percent_Identity=23.3243967828418, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1786229, Length=460, Percent_Identity=28.2608695652174, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI87082159, Length=458, Percent_Identity=28.82096069869, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1788068, Length=464, Percent_Identity=25.6465517241379, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1789312, Length=474, Percent_Identity=27.8481012658228, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790463, Length=448, Percent_Identity=25.2232142857143, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788074, Length=423, Percent_Identity=26.241134751773, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1789207, Length=452, Percent_Identity=24.7787610619469, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082404, Length=289, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32564663, Length=431, Percent_Identity=22.737819025522, Blast_Score=82, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17554160, Length=431, Percent_Identity=24.8259860788863, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17565978, Length=152, Percent_Identity=28.9473684210526, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71988651, Length=181, Percent_Identity=30.3867403314917, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6319941, Length=411, Percent_Identity=25.0608272506083, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6320595, Length=204, Percent_Identity=25, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320766, Length=455, Percent_Identity=23.5164835164835, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324469, Length=444, Percent_Identity=21.1711711711712, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324400, Length=455, Percent_Identity=23.2967032967033, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922874, Length=388, Percent_Identity=23.4536082474227, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI24640198, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640196, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640200, Length=513, Percent_Identity=21.8323586744639, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24649618, Length=376, Percent_Identity=22.6063829787234, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI20130083, Length=425, Percent_Identity=23.2941176470588, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24663515, Length=440, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24663519, Length=440, Percent_Identity=25.9090909090909, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24663511, Length=434, Percent_Identity=26.036866359447, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737451, Length=465, Percent_Identity=26.0215053763441, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI24652312, Length=465, Percent_Identity=26.0215053763441, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 54412; Mature: 54412
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIW CCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH SLAAAGKFFEGLVVFMTGVALPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLALGCDYPTAHLVISESIPSSSR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC GRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS CCEEEEEHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEEECCC HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATL CEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHH FASLPWFLQDLGTYGIGIFTPTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH IVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAFTGPAQIALIYAGFMLFNFMC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV CCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ATSLLGALITWLLRIETKGRRLDDVGL HHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRTETSDSAHSHATRPHGQSLHGTPEDVQRVQDYIDETPIWRDGTVVPAAPMTAMQWRIW CCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH SLAAAGKFFEGLVVFMTGVALPLMGAEFGMTPLQHGLVSAATLFGILVGALALGGLADQF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRKPMFVFEMALFILFLGLLAAAPNFSWMLIFLFGIGLALGCDYPTAHLVISESIPSSSR CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC GRLVLGAFSFQALGALSGTAVGYLVLVFDPTLSAWRLMYAVAIVPALIVLAGRFFITESS CCEEEEEHHHHHHHHCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHEEECCC HWLLAKGRVPEAEHNLKRLLTRQPRYPKHIRLKGLHEPGLARPESHLLVLFRRKNLRATL CEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCHH FASLPWFLQDLGTYGIGIFTPTILAAALGADTSIRMPGVAGLIAGDMRAAQGAAFIDILL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHH IVGMVAAVMLADKVGRVLLQVFGFLGCAAGLLLASFHDAFTGPAQIALIYAGFMLFNFMC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH NMGPNAQTYLLAGEVFPTHIRGIGAGFAAAFGKVGAVLTAFLFPILLSTLGTSNLLYMLV CCCCCCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ATSLLGALITWLLRIETKGRRLDDVGL HHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503 [H]