| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422738
Identifier: 158422738
GI number: 158422738
Start: 1241939
End: 1242706
Strand: Reverse
Name: 158422738
Synonym: AZC_1114
Alternate gene names: NA
Gene position: 1242706-1241939 (Counterclockwise)
Preceding gene: 158422746
Following gene: 158422732
Centisome position: 23.14
GC content: 73.7
Gene sequence:
>768_bases GTGCTGCTTCGTTTCCTGTTGTCCGGCGGGCGTCCGTTGGGTTCCGCCCTGCTCTGCGCCGGCTTTCTTCTGGCGCAGGC TGCTCCCGGCCACGCGGTGGTGGGCGGTCGCCCCGGCGCGGCCCAGGGCACCAGCCACACCGTCATGCTGGTCTCGACGC GGGGCGCCTCGTGCTCGGGCACCGCGCTGGCGCAGGATCTGATCCTGACCGCCGCCCATTGCGTCGCGCCGCCCGGCAGC TATGCGGTGGCGATCACCGGGTCCGGCCCGCCGCGCCTCATTCCCGCGCTGCGGATCGTGGTGCATCCCGGCTTCGATCC GGACCAGTTCCGCAACCGCCATCCGACGCCGGATCTCGCGCTGGTGAAGCTCGCCTCGCCGCTGCCGCCAAGCTTCCGCC CGGCCGCGCTCACGCAGGACAACACCCTACCGCAGCGGGGCGCGGAATATCTCATCGCCGGTTACGGCATGGCCTCGGAC GGGGCCGACGAGACCGCCGGCACCCTGCGCTGCACGAGCCTGCCTACCATCGGCACGACGGGCGGCATCATGGCCCGCCT CGCCTCGCCCATGAGCAATGCGGGGGCCTGCACCGGCGACAGCGGCGGCCCGGCTTTCGTGGGCAACCTGCTGGCCGGCG TCATCGGCTGGGCCACGGGCCCCAACGGCGCCCGCGGCTGCGGCGGCGTCACCGGCATCACGCTGGTGGGCCTCCAGCGG GACTGGATCGAGGCCACCGCGCGCAAGCTCGGCAGCCCCGTGCCCTGA
Upstream 100 bases:
>100_bases TCGCATCCGGCAGACGGGGGCCCGACCGCACCAAGGTGCGGGATTGACCCGCCCCCCACGCTCGGGGCAAAAATTTCGCC GCCGTACATGAGGGGGATCC
Downstream 100 bases:
>100_bases CCCGCCTTCGCCGCCGGGCTCAGCCGGCGGCGAACTTCAGCAGCTTGATGGCATCGAAGTCCTGGATGCCGCCGCCCACG CGCTTGGTGGTGTAGAACAG
Product: peptidase
Products: NA
Alternate protein names: Serine Protease; Peptidase; Protease; Secreted Trypsin-Like Serine Protease
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLLRFLLSGGRPLGSALLCAGFLLAQAAPGHAVVGGRPGAAQGTSHTVMLVSTRGASCSGTALAQDLILTAAHCVAPPGS YAVAITGSGPPRLIPALRIVVHPGFDPDQFRNRHPTPDLALVKLASPLPPSFRPAALTQDNTLPQRGAEYLIAGYGMASD GADETAGTLRCTSLPTIGTTGGIMARLASPMSNAGACTGDSGGPAFVGNLLAGVIGWATGPNGARGCGGVTGITLVGLQR DWIEATARKLGSPVP
Sequences:
>Translated_255_residues MLLRFLLSGGRPLGSALLCAGFLLAQAAPGHAVVGGRPGAAQGTSHTVMLVSTRGASCSGTALAQDLILTAAHCVAPPGS YAVAITGSGPPRLIPALRIVVHPGFDPDQFRNRHPTPDLALVKLASPLPPSFRPAALTQDNTLPQRGAEYLIAGYGMASD GADETAGTLRCTSLPTIGTTGGIMARLASPMSNAGACTGDSGGPAFVGNLLAGVIGWATGPNGARGCGGVTGITLVGLQR DWIEATARKLGSPVP >Mature_255_residues MLLRFLLSGGRPLGSALLCAGFLLAQAAPGHAVVGGRPGAAQGTSHTVMLVSTRGASCSGTALAQDLILTAAHCVAPPGS YAVAITGSGPPRLIPALRIVVHPGFDPDQFRNRHPTPDLALVKLASPLPPSFRPAALTQDNTLPQRGAEYLIAGYGMASD GADETAGTLRCTSLPTIGTTGGIMARLASPMSNAGACTGDSGGPAFVGNLLAGVIGWATGPNGARGCGGVTGITLVGLQR DWIEATARKLGSPVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI20302143, Length=253, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI209862865, Length=208, Percent_Identity=29.3269230769231, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI5803199, Length=208, Percent_Identity=29.3269230769231, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21618357, Length=208, Percent_Identity=29.3269230769231, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI21536452, Length=230, Percent_Identity=25.2173913043478, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI170296790, Length=230, Percent_Identity=25.6521739130435, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4503137, Length=189, Percent_Identity=27.5132275132275, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI6005844, Length=258, Percent_Identity=25.1937984496124, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4506147, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI21327705, Length=242, Percent_Identity=28.099173553719, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI4826950, Length=242, Percent_Identity=28.099173553719, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI21464127, Length=231, Percent_Identity=25.1082251082251, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24643597, Length=265, Percent_Identity=30.188679245283, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640013, Length=254, Percent_Identity=25.5905511811024, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281362515, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI78707268, Length=244, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI78707270, Length=244, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581698, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24643601, Length=238, Percent_Identity=28.1512605042017, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161078601, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI21356249, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24649918, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25504; Mature: 25504
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRFLLSGGRPLGSALLCAGFLLAQAAPGHAVVGGRPGAAQGTSHTVMLVSTRGASCSG CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCC TALAQDLILTAAHCVAPPGSYAVAITGSGPPRLIPALRIVVHPGFDPDQFRNRHPTPDLA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEEEEEECCCCCHHHHCCCCCCCCEE LVKLASPLPPSFRPAALTQDNTLPQRGAEYLIAGYGMASDGADETAGTLRCTSLPTIGTT EEEECCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCC GGIMARLASPMSNAGACTGDSGGPAFVGNLLAGVIGWATGPNGARGCGGVTGITLVGLQR HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCH DWIEATARKLGSPVP HHHHHHHHHHCCCCC >Mature Secondary Structure MLLRFLLSGGRPLGSALLCAGFLLAQAAPGHAVVGGRPGAAQGTSHTVMLVSTRGASCSG CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCC TALAQDLILTAAHCVAPPGSYAVAITGSGPPRLIPALRIVVHPGFDPDQFRNRHPTPDLA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHEEEEEEECCCCCHHHHCCCCCCCCEE LVKLASPLPPSFRPAALTQDNTLPQRGAEYLIAGYGMASDGADETAGTLRCTSLPTIGTT EEEECCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCC GGIMARLASPMSNAGACTGDSGGPAFVGNLLAGVIGWATGPNGARGCGGVTGITLVGLQR HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCH DWIEATARKLGSPVP HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA