Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158422733

Identifier: 158422733

GI number: 158422733

Start: 1238332

End: 1239504

Strand: Direct

Name: 158422733

Synonym: AZC_1109

Alternate gene names: NA

Gene position: 1238332-1239504 (Clockwise)

Preceding gene: 158422729

Following gene: 158422734

Centisome position: 23.06

GC content: 72.29

Gene sequence:

>1173_bases
ATGCTGTCGTCCGTCTTCCAGGCCCTGCGCCCGCGTCCCGCCGAGGCCAAGGCGAGCCGCACCGCCGCGCTGGTGGCGCT
GCTCGCCACCGGCCGCGCCCGCTGGACGCCCCGCGATTATGCCGGGCTCGCCCGCGAGGGCTTTGCCCGCAATGCGGTGG
CCTATCGCGCCGTTCGGCTGATCAGCGAGGCCGCCGCCAGCGTGCCGCTGCTCTTGATGGACGGCGACCGCGAGATCGAC
GCCCATCCGCTGCTGGACCTCCTCGCACGGCCCCATCCGCGTGCGGCGAAGGCGGATTTCCTGGAGGCGCTGTGCGGCCA
TCTGCTGGTGGCCGGCAATGCCTATGTGGAAGCGGTGGCGGTGGAGGGCGCCGTGCGCGAACTCCACGTGCTGCGGCCGG
ATCGCGTGCGCATCGTGCCCGGCCCCGACGGCTGGCCGGAGGCGTTCGACTACACGCTGGAGGGCCGCACCCTGCGCATT
CCGCAGGAGAGCATCGTGCCGGGCGCCGACGTGCCGCCGGTGCTGCACCTCGCCTTGTTCAATCCGCTGGATGATCTCTA
CGGCTTCGCCCCGCTGGAGGCGGCGGCGCAGGCGCTCGATCTGCACAATGCCGCCGGCGCCTGGAACAAGGCGCTGCTCG
ACAATGCCGCGCGCCCTTCCGGCGCGCTGGTCTATGGCGGCACGGGTTCGCTCTCCGAGGAACAGTTCGCGCGGCTCAGG
GAAGAACTGGAGGCGAGCTTCCAGGGTGCCGCCAATGCCGGCCGCCCGCTGCTGCTGGAAGGCGGGCTCGACTGGAAGCC
CCTCGGCCTCAGCCCGAAGGACATGGATTTCGCCGCCGCCCGCGAGGCCGCCGCGCGGGAGATCGCGCTGGCGCTCGGCG
TGCCGCCCATGCTGCTTGGCATTCCGGGCGACAACACCTATGCCAATTATGCCGAGGCCAACCGCGTGCTTTGGCGCCAG
AGCGTGCTGCCGCTGGTGAAGCGGGTTGCCGGTGCGCTGAGCGCCTGGCTCGCGCCGGCCTTCGGTTCGGGCCTCGCGCT
CGTGCCCGACCTCGACCAGGTGGAGGCGCTCGCCGCCGAGCGCTCCGAGCTCTGGAGCCGCGTGAACGCGGCCGATTTCC
TCACCGATGCGGAGAAGCGCGCGGCGGTCGGCTACGGCCCCGTCGCGCCCTGA

Upstream 100 bases:

>100_bases
GAGGGCGCGGTGCGCTTTCACGCTTCAGACACGATCCTCCAGCGGCCGGTGGCCGTCGCCTGTCCTGCTTGCTCCGGCTG
CGGAGCCGAGGGAGTCCCGC

Downstream 100 bases:

>100_bases
GGGGAGGTCATCTTGGAGAGCATCCTTCAGGTTTTCGCCACGCGCGGCGACCTCGCCCATCTGGCGCTCGCCGCCTGGGC
GCTGAGCGCGTCCGGCGTTG

Product: phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID
AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI
PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR
EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ
SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP

Sequences:

>Translated_390_residues
MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID
AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI
PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR
EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ
SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP
>Mature_390_residues
MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRLISEAAASVPLLLMDGDREID
AHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVAVEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRI
PQESIVPGADVPPVLHLALFNPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR
EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLGIPGDNTYANYAEANRVLWRQ
SVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAERSELWSRVNAADFLTDAEKRAAVGYGPVAP

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 41491; Mature: 41491

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRL
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISEAAASVPLLLMDGDREIDAHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVA
HHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHH
VEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRIPQESIVPGADVPPVLHLALF
HHHHHHHHHEECCCCEEEECCCCCCHHHHCEEECCCEEECCHHHCCCCCCCCHHHHHHHH
NPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR
CCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH
EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLG
HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
IPGDNTYANYAEANRVLWRQSVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
RSELWSRVNAADFLTDAEKRAAVGYGPVAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLSSVFQALRPRPAEAKASRTAALVALLATGRARWTPRDYAGLAREGFARNAVAYRAVRL
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ISEAAASVPLLLMDGDREIDAHPLLDLLARPHPRAAKADFLEALCGHLLVAGNAYVEAVA
HHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEHHH
VEGAVRELHVLRPDRVRIVPGPDGWPEAFDYTLEGRTLRIPQESIVPGADVPPVLHLALF
HHHHHHHHHEECCCCEEEECCCCCCHHHHCEEECCCEEECCHHHCCCCCCCCHHHHHHHH
NPLDDLYGFAPLEAAAQALDLHNAAGAWNKALLDNAARPSGALVYGGTGSLSEEQFARLR
CCHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHH
EELEASFQGAANAGRPLLLEGGLDWKPLGLSPKDMDFAAAREAAAREIALALGVPPMLLG
HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
IPGDNTYANYAEANRVLWRQSVLPLVKRVAGALSAWLAPAFGSGLALVPDLDQVEALAAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
RSELWSRVNAADFLTDAEKRAAVGYGPVAP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA