| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422721
Identifier: 158422721
GI number: 158422721
Start: 1224336
End: 1224959
Strand: Reverse
Name: 158422721
Synonym: AZC_1097
Alternate gene names: NA
Gene position: 1224959-1224336 (Counterclockwise)
Preceding gene: 158422722
Following gene: 158422716
Centisome position: 22.81
GC content: 69.39
Gene sequence:
>624_bases ATGAGCCTGCGCTTTGACGGCTATCGGCGGACCTCCCGCCTCGGATTGGCCAATCCCTGGCGCTGGCGCATCCCGGCGCG GGCGGAGCGCCCCTCGCTCCTGCTGGCGCTCGCCATCATCCTCGTGCTGGCCGGCATGGTGCACCTCGTCTCCATCCTCG CCATGCCGCTGCTCTCCGAGCGCAACGCCTTCCGGCGGCTGGCGGCGGACCGGCCGGTCAATGAGATGGTGGCGCTGAAG GGCACGGGTGACGTCCTGCCGATGATGGATCCGGCCTTCGTCTATTCCGTCTGCCTCTATGACCTGTCGAAGGAGCCGCT GAAGCTGCGGGTGCCGGCAACCGCCGACTACACCTCGGTGTCGTTCTACACGGCGCGGGGCGTCGGCTTCTACGCCCTGA GCGACAAGGCGGCGGGCAAGGTGATCGAGCTCGATCTCATGACGCCGGCCCAGAAGGCGGCCATTCCCGAGGACGAGGAA ATCACCGCAGCCGACCGGTTGGTGGTGGTGTCGCCCTCCACCACGGGCATCGCGCTGGTGCGCGCCTTCACCCGCGACCG GGACATGCGGGACATGGTGCGCGGCCAGCTCAATGCCGCCACCTGCGGGCCCGCGCCCGGCTGA
Upstream 100 bases:
>100_bases ATGTGCAGGTGGCGCTCCGACTCTATGACGCGCCCTTCAGCTTCGCCTCCGGCGCCGTGGAGGATGCGGTTCTGCCCCGC GTCACGACGGAGCGCTGCCC
Downstream 100 bases:
>100_bases TCGGGGTCAGCGATTGCCCGTCAGGAAGAAGCTGAACGGCAGCGGCGGGCGGCTGGCATCGGCGGGGCCCATGCCCATCG GCGCGTCCCCGTGGCGCTCC
Product: integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSLRFDGYRRTSRLGLANPWRWRIPARAERPSLLLALAIILVLAGMVHLVSILAMPLLSERNAFRRLAADRPVNEMVALK GTGDVLPMMDPAFVYSVCLYDLSKEPLKLRVPATADYTSVSFYTARGVGFYALSDKAAGKVIELDLMTPAQKAAIPEDEE ITAADRLVVVSPSTTGIALVRAFTRDRDMRDMVRGQLNAATCGPAPG
Sequences:
>Translated_207_residues MSLRFDGYRRTSRLGLANPWRWRIPARAERPSLLLALAIILVLAGMVHLVSILAMPLLSERNAFRRLAADRPVNEMVALK GTGDVLPMMDPAFVYSVCLYDLSKEPLKLRVPATADYTSVSFYTARGVGFYALSDKAAGKVIELDLMTPAQKAAIPEDEE ITAADRLVVVSPSTTGIALVRAFTRDRDMRDMVRGQLNAATCGPAPG >Mature_206_residues SLRFDGYRRTSRLGLANPWRWRIPARAERPSLLLALAIILVLAGMVHLVSILAMPLLSERNAFRRLAADRPVNEMVALKG TGDVLPMMDPAFVYSVCLYDLSKEPLKLRVPATADYTSVSFYTARGVGFYALSDKAAGKVIELDLMTPAQKAAIPEDEEI TAADRLVVVSPSTTGIALVRAFTRDRDMRDMVRGQLNAATCGPAPG
Specific function: Unknown
COG id: COG5436
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22636; Mature: 22505
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRFDGYRRTSRLGLANPWRWRIPARAERPSLLLALAIILVLAGMVHLVSILAMPLLSE CCCCCCCCCHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNAFRRLAADRPVNEMVALKGTGDVLPMMDPAFVYSVCLYDLSKEPLKLRVPATADYTSV HHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEE SFYTARGVGFYALSDKAAGKVIELDLMTPAQKAAIPEDEEITAADRLVVVSPSTTGIALV EEEEECCEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCCEECCCEEEEECCCCCHHHHH RAFTRDRDMRDMVRGQLNAATCGPAPG HHHHCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SLRFDGYRRTSRLGLANPWRWRIPARAERPSLLLALAIILVLAGMVHLVSILAMPLLSE CCCCCCCCHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNAFRRLAADRPVNEMVALKGTGDVLPMMDPAFVYSVCLYDLSKEPLKLRVPATADYTSV HHHHHHHHCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEE SFYTARGVGFYALSDKAAGKVIELDLMTPAQKAAIPEDEEITAADRLVVVSPSTTGIALV EEEEECCEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCCEECCCEEEEECCCCCHHHHH RAFTRDRDMRDMVRGQLNAATCGPAPG HHHHCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA