Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is ydhK [H]

Identifier: 158422700

GI number: 158422700

Start: 1202210

End: 1204285

Strand: Direct

Name: ydhK [H]

Synonym: AZC_1076

Alternate gene names: 158422700

Gene position: 1202210-1204285 (Clockwise)

Preceding gene: 158422699

Following gene: 158422701

Centisome position: 22.39

GC content: 72.06

Gene sequence:

>2076_bases
ATGATCGCGCTGCTGGCCAGCCTGCGCCCACGGGCGACGGACTGGATCTTCTCGCTGAAGACCTTCGCCGCCGCCATGAC
GGCGCTCTTCATCGCGCTGTCCTGCGGGCTGGAGAAGCCCTTCTGGGCCATGGCGACGGTCTATATCGTCTCCTCGCCCA
TGTCCGGTGCGCTGTCGTCCAAGGCGGTCTACCGGGTGCTGGGCACCATCATCGGTGCCACCGCGACGGTGGTGCTGGTG
CCCAATCTCGTGAACGCCCCGGAACTGCTCAGCCTCGTCCTCGCGCTGTGGGTCGGCGGGTGCCTCGCCGTCTCGCTGCT
CGACCGTACCCCGCGGTCCTACGTCACCATGCTCGGGGGCTACACGGTGGCGCTCATCGGCTTTCCGGCGGTGAGCGATC
CCGGCGCGGTGTTCGACACGGCGGTGGCGCGGGTGGAGGAGATCGTGCTCGGCATCACCTGCGCCGGGCTGTTCGGCCAT
CTGCTGCTGCCGCGCCACGTGGGCCCGATGGTCGCCGGCCGTATTGATGCCTGGCTCAAGGACGCGGGGGAGCTCACCCT
CGACGCCTTCGCGGGCGTGACGGGCGCGGAGGCCCGCGCCAAGCGCGCCCGGCTGGCCGCCGACGCGACGGAACTGCACG
GCCTGTCGGTGCACCTTGCCTATGACCATTCCCAGTTTCGCGGCACCACCGGCCTGATGCAGGCGCTGCGCGGCCGCATG
CTGCTGCTGCTGCCCCTGCTGGGTGGCATTGCCGCGCGCGTGTCCTCCCTGAAGCAGGACGGCGCCCTGACCGACGACCT
CGCGCAGGTGCTGGAGCGCCTTTCGGCCTGGACGCGGGCGGGCGAGGCGGTGGACGCGCAGGAGGCGGCATGGCTGCGTG
CGCGTCTCGCGGACCTCAAGCCGGACACCGGCCCCGATGCCGCCTGGGCCGCGCTCCAGCAGGCCTATCTCATCGACCGC
CTGAACCTCTTCATGGACGTGCGCGAGCAGTGCCGCGACCTCTGGCGCGCCGTGAAGAGCGGCGGGGCCGCGCTGCCACC
TAGCCTCGACGGCAACCGCCGCCTGCCGCCCGCGGGCACGGTGCATCGCGATCCGCGCCTCGCGGTCTGGTCGGGGGCCT
CGGCGATGCTCTCTATCCTGCTCTTCTGCGCCTTCTGGATCTCCAGCGGCTGGGCCGACGGCGCGACCGGCGCGCAGATG
GTGGCGGTGGCCGCCTGCCTCATGGCCGGGCTCGACGATCCGGCGGTGGGCATCCTCTCCTTCGTGCGCGGCCTGCTGGT
GGCCATCGCCGCAGTCTGCCTCTATGCCTTCGTGATCCTGCCGGGCACGGACGGCTTCCCGCTGCTGACATTCATGCTGG
CGCTCTATCTGGTGCCTGCCGGCACGCTGATGAGCATGCCGGGCTGGGGCGGCACGGGCCTTGCTCTGTGCCTCAATTTC
TCAGCGCTCATCGGCATTCAGGAGCGCTTCTCCGCCGATTTCGCCGCCACGCTCAATGGCGACATGGCCGCCGTCATCGG
TATGCTGTTCGCCGCGGTGGTCGCGACGCTGGTGCGCTCCATGACGGTGCAGCAGGCCATCGGACGGCTGTTGCGGGCCA
ATGCCTCGGACCTCGCGGCCATCGCGCAGAGCCCGGCGCAGGTGCGCGCCGACCCGCTGGCGGTGCGGATGCTGGACCGG
CTGGGGCTGATCGTGCCCCGACTCGCCAAGGCCGGCCCCGACGCGCCCGAGGCGGGGCATGCCCTGCGCGAAGTCATCGC
CGCCATCAATGTCGCGGACCTGAAGCGGGCCCGCCACGCGCTGCCGGCGGGGCCGCGCCGGGCGGTGGAGGAACTCCTCG
GCCGCATCGCCGGTGCCGCCCGCGCGGCGGGCGAGGGCACGCTCTTCGATCAGGCCATGACCCCCGTCGCGCCGCCGCTC
GATGATGCGCTCGGCGCGGTTCTGGCCCTGCCGTCCGGCGGACGGCGGGACGAGGCGCTCACCGCGCTGGTGGCGCTGCG
CTGCGCCCTTGTGCCGGGCGCCGCCGCCTTCCGTCCGTCCGCCGTCCATGAACCCGTCTGGAAGGAGGCCGTGTGA

Upstream 100 bases:

>100_bases
AGGAGGATCTCGCCCGCACGCTCCATGTGCTGCGCACCGTCGAGGGGCGCCTCGATCGTGAGGCGGAGACCCGTCGGCCC
GGAGCGGAGGGAGATGCCGC

Downstream 100 bases:

>100_bases
TGGCCGATCTCGATCTGCATGGGGTGTTCATTCCCCGTCTGCTGGTTCTGGCGGTCGCCGCTTACGTGACGCTGGCGCTG
CTGCGTCCGCTCCTCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 691; Mature: 691

Protein sequence:

>691_residues
MIALLASLRPRATDWIFSLKTFAAAMTALFIALSCGLEKPFWAMATVYIVSSPMSGALSSKAVYRVLGTIIGATATVVLV
PNLVNAPELLSLVLALWVGGCLAVSLLDRTPRSYVTMLGGYTVALIGFPAVSDPGAVFDTAVARVEEIVLGITCAGLFGH
LLLPRHVGPMVAGRIDAWLKDAGELTLDAFAGVTGAEARAKRARLAADATELHGLSVHLAYDHSQFRGTTGLMQALRGRM
LLLLPLLGGIAARVSSLKQDGALTDDLAQVLERLSAWTRAGEAVDAQEAAWLRARLADLKPDTGPDAAWAALQQAYLIDR
LNLFMDVREQCRDLWRAVKSGGAALPPSLDGNRRLPPAGTVHRDPRLAVWSGASAMLSILLFCAFWISSGWADGATGAQM
VAVAACLMAGLDDPAVGILSFVRGLLVAIAAVCLYAFVILPGTDGFPLLTFMLALYLVPAGTLMSMPGWGGTGLALCLNF
SALIGIQERFSADFAATLNGDMAAVIGMLFAAVVATLVRSMTVQQAIGRLLRANASDLAAIAQSPAQVRADPLAVRMLDR
LGLIVPRLAKAGPDAPEAGHALREVIAAINVADLKRARHALPAGPRRAVEELLGRIAGAARAAGEGTLFDQAMTPVAPPL
DDALGAVLALPSGGRRDEALTALVALRCALVPGAAAFRPSAVHEPVWKEAV

Sequences:

>Translated_691_residues
MIALLASLRPRATDWIFSLKTFAAAMTALFIALSCGLEKPFWAMATVYIVSSPMSGALSSKAVYRVLGTIIGATATVVLV
PNLVNAPELLSLVLALWVGGCLAVSLLDRTPRSYVTMLGGYTVALIGFPAVSDPGAVFDTAVARVEEIVLGITCAGLFGH
LLLPRHVGPMVAGRIDAWLKDAGELTLDAFAGVTGAEARAKRARLAADATELHGLSVHLAYDHSQFRGTTGLMQALRGRM
LLLLPLLGGIAARVSSLKQDGALTDDLAQVLERLSAWTRAGEAVDAQEAAWLRARLADLKPDTGPDAAWAALQQAYLIDR
LNLFMDVREQCRDLWRAVKSGGAALPPSLDGNRRLPPAGTVHRDPRLAVWSGASAMLSILLFCAFWISSGWADGATGAQM
VAVAACLMAGLDDPAVGILSFVRGLLVAIAAVCLYAFVILPGTDGFPLLTFMLALYLVPAGTLMSMPGWGGTGLALCLNF
SALIGIQERFSADFAATLNGDMAAVIGMLFAAVVATLVRSMTVQQAIGRLLRANASDLAAIAQSPAQVRADPLAVRMLDR
LGLIVPRLAKAGPDAPEAGHALREVIAAINVADLKRARHALPAGPRRAVEELLGRIAGAARAAGEGTLFDQAMTPVAPPL
DDALGAVLALPSGGRRDEALTALVALRCALVPGAAAFRPSAVHEPVWKEAV
>Mature_691_residues
MIALLASLRPRATDWIFSLKTFAAAMTALFIALSCGLEKPFWAMATVYIVSSPMSGALSSKAVYRVLGTIIGATATVVLV
PNLVNAPELLSLVLALWVGGCLAVSLLDRTPRSYVTMLGGYTVALIGFPAVSDPGAVFDTAVARVEEIVLGITCAGLFGH
LLLPRHVGPMVAGRIDAWLKDAGELTLDAFAGVTGAEARAKRARLAADATELHGLSVHLAYDHSQFRGTTGLMQALRGRM
LLLLPLLGGIAARVSSLKQDGALTDDLAQVLERLSAWTRAGEAVDAQEAAWLRARLADLKPDTGPDAAWAALQQAYLIDR
LNLFMDVREQCRDLWRAVKSGGAALPPSLDGNRRLPPAGTVHRDPRLAVWSGASAMLSILLFCAFWISSGWADGATGAQM
VAVAACLMAGLDDPAVGILSFVRGLLVAIAAVCLYAFVILPGTDGFPLLTFMLALYLVPAGTLMSMPGWGGTGLALCLNF
SALIGIQERFSADFAATLNGDMAAVIGMLFAAVVATLVRSMTVQQAIGRLLRANASDLAAIAQSPAQVRADPLAVRMLDR
LGLIVPRLAKAGPDAPEAGHALREVIAAINVADLKRARHALPAGPRRAVEELLGRIAGAARAAGEGTLFDQAMTPVAPPL
DDALGAVLALPSGGRRDEALTALVALRCALVPGAAAFRPSAVHEPVWKEAV

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]

Homologues:

Organism=Escherichia coli, GI1789636, Length=532, Percent_Identity=24.812030075188, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1787933, Length=545, Percent_Identity=24.7706422018349, Blast_Score=113, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 72268; Mature: 72268

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLASLRPRATDWIFSLKTFAAAMTALFIALSCGLEKPFWAMATVYIVSSPMSGALSS
CEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
KAVYRVLGTIIGATATVVLVPNLVNAPELLSLVLALWVGGCLAVSLLDRTPRSYVTMLGG
HHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
YTVALIGFPAVSDPGAVFDTAVARVEEIVLGITCAGLFGHLLLPRHVGPMVAGRIDAWLK
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAGELTLDAFAGVTGAEARAKRARLAADATELHGLSVHLAYDHSQFRGTTGLMQALRGRM
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHH
LLLLPLLGGIAARVSSLKQDGALTDDLAQVLERLSAWTRAGEAVDAQEAAWLRARLADLK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDTGPDAAWAALQQAYLIDRLNLFMDVREQCRDLWRAVKSGGAALPPSLDGNRRLPPAGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
VHRDPRLAVWSGASAMLSILLFCAFWISSGWADGATGAQMVAVAACLMAGLDDPAVGILS
CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
FVRGLLVAIAAVCLYAFVILPGTDGFPLLTFMLALYLVPAGTLMSMPGWGGTGLALCLNF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH
SALIGIQERFSADFAATLNGDMAAVIGMLFAAVVATLVRSMTVQQAIGRLLRANASDLAA
HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IAQSPAQVRADPLAVRMLDRLGLIVPRLAKAGPDAPEAGHALREVIAAINVADLKRARHA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPAGPRRAVEELLGRIAGAARAAGEGTLFDQAMTPVAPPLDDALGAVLALPSGGRRDEAL
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHEECCCCCCHHHHH
TALVALRCALVPGAAAFRPSAVHEPVWKEAV
HHHHHHHHHHCCCCHHCCCCHHCCCHHHCCC
>Mature Secondary Structure
MIALLASLRPRATDWIFSLKTFAAAMTALFIALSCGLEKPFWAMATVYIVSSPMSGALSS
CEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
KAVYRVLGTIIGATATVVLVPNLVNAPELLSLVLALWVGGCLAVSLLDRTPRSYVTMLGG
HHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
YTVALIGFPAVSDPGAVFDTAVARVEEIVLGITCAGLFGHLLLPRHVGPMVAGRIDAWLK
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
DAGELTLDAFAGVTGAEARAKRARLAADATELHGLSVHLAYDHSQFRGTTGLMQALRGRM
HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHHHH
LLLLPLLGGIAARVSSLKQDGALTDDLAQVLERLSAWTRAGEAVDAQEAAWLRARLADLK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDTGPDAAWAALQQAYLIDRLNLFMDVREQCRDLWRAVKSGGAALPPSLDGNRRLPPAGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
VHRDPRLAVWSGASAMLSILLFCAFWISSGWADGATGAQMVAVAACLMAGLDDPAVGILS
CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
FVRGLLVAIAAVCLYAFVILPGTDGFPLLTFMLALYLVPAGTLMSMPGWGGTGLALCLNF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHH
SALIGIQERFSADFAATLNGDMAAVIGMLFAAVVATLVRSMTVQQAIGRLLRANASDLAA
HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IAQSPAQVRADPLAVRMLDRLGLIVPRLAKAGPDAPEAGHALREVIAAINVADLKRARHA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPAGPRRAVEELLGRIAGAARAAGEGTLFDQAMTPVAPPLDDALGAVLALPSGGRRDEAL
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHEECCCCCCHHHHH
TALVALRCALVPGAAAFRPSAVHEPVWKEAV
HHHHHHHHHHCCCCHHCCCCHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]