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The map label for this gene is yodF [H]

Identifier: 158422646

GI number: 158422646

Start: 1146748

End: 1148232

Strand: Reverse

Name: yodF [H]

Synonym: AZC_1022

Alternate gene names: 158422646

Gene position: 1148232-1146748 (Counterclockwise)

Preceding gene: 158422647

Following gene: 158422639

Centisome position: 21.38

GC content: 66.33

Gene sequence:

>1485_bases
ATGATCGCCGTTCGCGACTGGGCCGAACTGTCGGTCTTTCTCGTCTTCTTCGCCCTCGTCACCATCATGGGCTTCGTCGC
CAGCCGGTGGAAGAAGGCGGACAATCACGCCAAGCTCGACGAATGGGGCCTTGGCGGGCGCCAGTTCGGCGTCTGGATCA
CCTGGTTCCTCGTGGGTGGCGACTTCTATACCGCCTACACCGTCATCGCCGTGCCGGCGCTGGTCTATGCGGTGGGGGCC
TACGGCTTCTTCGCTTTGCCCTACACCATCGTCGTCTATCCCTTCATCTTCCTCGTCATGCCCCGGCTCTGGAAGGTCGC
CCATGCGGCCGGCCATGTGACGGCGGCGGACGTGGTGCACGGCACCTACAACAACCGCTGGCTGGAACTGGCGGTGGCGC
TCACCGGCCTCGTCGCCACCATGCCCTACATCGCCCTCCAGCTGGTCGGCATGCAGGCGGTGATCGGCGCCATGGGGCTG
AAGGGCGAACTGCCCATCATCGTCGCCTTCCTCATCCTCGCTCTCTACACCTACTCGGCGGGCCTTCGCGCTCCCGCGCT
CATCGCCTTCGTGAAGGACGTGATGATCTACATCGTGGTCATCGTGGCCGTGGTGGTGGTGCCCATGCACCTTGGCGGCT
ATGGCGCGGTGTTCAGCGCGGCGGATGCGGTCTATGCGGCCAAGGGCGGCAACACCGGCCTCGTGCTGAAGGATGCGCAG
ATGCTCCCCTACGCCACGCTGGCGCTGGGGTCGGCGCTGGCCGCCTTCATGTATCCGCACACCCTCACCGGCATCTTCGC
GGCGAAGAGCGCGAACACCATCCGCTCCAACGCCGTGCTGCTGCCGGCCTATACGGTGCTGCTCGGCCTCATCGCGCTGC
TCGGCTACATGGCCCATGCGGCGGGCGTGAAGGTGACCAGCCCCACGGACGTGGTGCCCGTGCTGTTCCAGACGCTGTTC
TCCGGCTGGTTCTCGGGCTTCGCTTTCGCGGCCATCGGCATCGGCGCGCTGGTGCCGGCGGCGGTGATGTCCATCGGCGC
CTCGAATCTTTTCACCCGCAACGTCTGGAAGGCCTATGTGAACCCGCAGGTCACGGAAGCCGGCGAGGCGCAGGTGGCCA
AGATCGTCTCGCTGGTGGTGAAGGTGGGCGCGCTCGCCTGCATCGTCTTCATGCCGACGAAGTTCGCCATCGACCTCCAG
CTTCTGGGCGGCCTCTGGATTCTCCAGACTTTCCCCTCGCTGGTGTTCGGGCTGTTCACCCGCTGGTTCCGCGCTCCCGC
GCTGCTGGCCGGCTGGCTCGTCGGCATTGTCGGCGGCACCACGGTCGCCTTCGCGGACGGCCTCGTGCCGGTGCACACGC
TGGTCATCGGCGGGCAGAACTACACCATCTATGTCGGCCTGCTGGCCTTCGCTGCCAACGTGATCGTGGCAGTGGTGGTG
AACGCCCTCCTCGCCGCCACCTCGCCCAAGCGCGTGACGGCGTGA

Upstream 100 bases:

>100_bases
AGCCCCAGCTCCTCGGCTTTCCCTTCTTCTACTGGTACCAGCTCCTTTGGGTACCTCTGACCTCGCTCCTCACCTACATC
GTCTGGAAGGGAACGAAGGA

Downstream 100 bases:

>100_bases
CGCAAAGGGGCTCCCGGACGGTCCGTCCGGGAGCCTGCTTTCTTATGGATCGGCGCGCAGGAATTCGAAGGGCTTGGCCG
CCTCGAACTGCGCTGCGGCA

Product: monocarboxylic acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MIAVRDWAELSVFLVFFALVTIMGFVASRWKKADNHAKLDEWGLGGRQFGVWITWFLVGGDFYTAYTVIAVPALVYAVGA
YGFFALPYTIVVYPFIFLVMPRLWKVAHAAGHVTAADVVHGTYNNRWLELAVALTGLVATMPYIALQLVGMQAVIGAMGL
KGELPIIVAFLILALYTYSAGLRAPALIAFVKDVMIYIVVIVAVVVVPMHLGGYGAVFSAADAVYAAKGGNTGLVLKDAQ
MLPYATLALGSALAAFMYPHTLTGIFAAKSANTIRSNAVLLPAYTVLLGLIALLGYMAHAAGVKVTSPTDVVPVLFQTLF
SGWFSGFAFAAIGIGALVPAAVMSIGASNLFTRNVWKAYVNPQVTEAGEAQVAKIVSLVVKVGALACIVFMPTKFAIDLQ
LLGGLWILQTFPSLVFGLFTRWFRAPALLAGWLVGIVGGTTVAFADGLVPVHTLVIGGQNYTIYVGLLAFAANVIVAVVV
NALLAATSPKRVTA

Sequences:

>Translated_494_residues
MIAVRDWAELSVFLVFFALVTIMGFVASRWKKADNHAKLDEWGLGGRQFGVWITWFLVGGDFYTAYTVIAVPALVYAVGA
YGFFALPYTIVVYPFIFLVMPRLWKVAHAAGHVTAADVVHGTYNNRWLELAVALTGLVATMPYIALQLVGMQAVIGAMGL
KGELPIIVAFLILALYTYSAGLRAPALIAFVKDVMIYIVVIVAVVVVPMHLGGYGAVFSAADAVYAAKGGNTGLVLKDAQ
MLPYATLALGSALAAFMYPHTLTGIFAAKSANTIRSNAVLLPAYTVLLGLIALLGYMAHAAGVKVTSPTDVVPVLFQTLF
SGWFSGFAFAAIGIGALVPAAVMSIGASNLFTRNVWKAYVNPQVTEAGEAQVAKIVSLVVKVGALACIVFMPTKFAIDLQ
LLGGLWILQTFPSLVFGLFTRWFRAPALLAGWLVGIVGGTTVAFADGLVPVHTLVIGGQNYTIYVGLLAFAANVIVAVVV
NALLAATSPKRVTA
>Mature_494_residues
MIAVRDWAELSVFLVFFALVTIMGFVASRWKKADNHAKLDEWGLGGRQFGVWITWFLVGGDFYTAYTVIAVPALVYAVGA
YGFFALPYTIVVYPFIFLVMPRLWKVAHAAGHVTAADVVHGTYNNRWLELAVALTGLVATMPYIALQLVGMQAVIGAMGL
KGELPIIVAFLILALYTYSAGLRAPALIAFVKDVMIYIVVIVAVVVVPMHLGGYGAVFSAADAVYAAKGGNTGLVLKDAQ
MLPYATLALGSALAAFMYPHTLTGIFAAKSANTIRSNAVLLPAYTVLLGLIALLGYMAHAAGVKVTSPTDVVPVLFQTLF
SGWFSGFAFAAIGIGALVPAAVMSIGASNLFTRNVWKAYVNPQVTEAGEAQVAKIVSLVVKVGALACIVFMPTKFAIDLQ
LLGGLWILQTFPSLVFGLFTRWFRAPALLAGWLVGIVGGTTVAFADGLVPVHTLVIGGQNYTIYVGLLAFAANVIVAVVV
NALLAATSPKRVTA

Specific function: Unknown

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 52333; Mature: 52333

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCC
>Mature Secondary Structure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HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]