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The map label for this gene is ybjT [C]

Identifier: 158422640

GI number: 158422640

Start: 1141286

End: 1142272

Strand: Direct

Name: ybjT [C]

Synonym: AZC_1016

Alternate gene names: 158422640

Gene position: 1141286-1142272 (Clockwise)

Preceding gene: 158422632

Following gene: 158422641

Centisome position: 21.25

GC content: 69.3

Gene sequence:

>987_bases
ATGAGCGACGTGACGGTGGCGGAACAGCCGGTGACCAACAGCCTGGTGACGGTGTTTGGCGGGTCCGGCTTCCTTGGCCG
CCACGTGGTGCGCGCGCTCGCCCGACGCGGCTACCGGGTGCGCGTGGCCGTGCGCCGTCCTGAGCTTGCCGGCTTCCTCC
AGCCCATGGGCTATGTGGGCCAGATCCAGGTCATCCAGGCGAATCTGCGCTATCCCGACTCGGTCCGCCGTGCGGTGGAA
GGGGCGGACGCGGTGGTGAACCTCGTCGGCATCCTGGCCCCCTCGGGCCGCCAGTCCTTCAAGGCGGTGCAGGCCGCCGG
CGCCCGCGCAGTGGCTGAAGCTGCGGCGGCGGTCGGCGCCCGCCTCGTGCATGTCTCGGCCATCGGTGCCTCCGCGAGCA
GTGCGTCCGACTATGCCAAGACCAAGGCCGAAGGCGAGGCGGCGGTTCGCGCGGCGGTGCCGGATGCCATCATCCTGCGT
CCTTCCATCGTGTTCGGTCCCGAGGACGACTTCTTCAACAAGTTCGCCGGCATGGCGCGCATGAGCCCGGTTTTGCCGCT
GATCGGCGGTGGCCAGACCCGGTTCCAGCCGGTGTTCGTGGGTGACGTGGCCGAGGCGGTCGAGCGTGCGGTGGAGGGCC
TCGCCAAGCCGGGCGCCACCTATGAGCTCGGCGGCCCGGAAGTGCGCACCTTCGAACAGCTGCTGCGCACCACCCTGCAC
GAGATCGGTGCCAAGCGGCCGCTGGTGTCGCTGCCCTTCGGCGTCGCCGCCTGCGTCGGCTCCATCGCGCAGAAGCTGCC
GGGCGCCCCAATCACCAAGGATCAGGTGGAACTGCTGAAGTCCGACAATGTGGTGTCCGACGCCGCCAAGGCGGAGGGCC
GGACGCTGGAAGGGCTGGGTGTCACTCCCACCGCGCTCGAATCCATCCTCGGGAGCTATCTTTGGCGCTTCCGCAAGGCG
GGTCAGTTCACCCATATCCCGACCTGA

Upstream 100 bases:

>100_bases
GCGCAGCGATGATCGCGTATGTCGTGCGCATCGTATATAGAGCACGCGCGAGCGCGATCCTTTAAGAAAGGCACGCGCCG
AGTACCGCGGGAGAGGGCAG

Downstream 100 bases:

>100_bases
TGGGGCGCCGCGCGCGGCGCGGACCGGAAAGGCAGACGGGACGATGGCCATCGAGGTGAAGATCTGCGGGCTCAGCACCG
CCGAGACGCTGGAGGCCGCG

Product: NAD dependent epimerase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSDVTVAEQPVTNSLVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGFLQPMGYVGQIQVIQANLRYPDSVRRAVE
GADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAVGARLVHVSAIGASASSASDYAKTKAEGEAAVRAAVPDAIILR
PSIVFGPEDDFFNKFAGMARMSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLLRTTLH
EIGAKRPLVSLPFGVAACVGSIAQKLPGAPITKDQVELLKSDNVVSDAAKAEGRTLEGLGVTPTALESILGSYLWRFRKA
GQFTHIPT

Sequences:

>Translated_328_residues
MSDVTVAEQPVTNSLVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGFLQPMGYVGQIQVIQANLRYPDSVRRAVE
GADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAVGARLVHVSAIGASASSASDYAKTKAEGEAAVRAAVPDAIILR
PSIVFGPEDDFFNKFAGMARMSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLLRTTLH
EIGAKRPLVSLPFGVAACVGSIAQKLPGAPITKDQVELLKSDNVVSDAAKAEGRTLEGLGVTPTALESILGSYLWRFRKA
GQFTHIPT
>Mature_327_residues
SDVTVAEQPVTNSLVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGFLQPMGYVGQIQVIQANLRYPDSVRRAVEG
ADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAVGARLVHVSAIGASASSASDYAKTKAEGEAAVRAAVPDAIILRP
SIVFGPEDDFFNKFAGMARMSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLLRTTLHE
IGAKRPLVSLPFGVAACVGSIAQKLPGAPITKDQVELLKSDNVVSDAAKAEGRTLEGLGVTPTALESILGSYLWRFRKAG
QFTHIPT

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=303, Percent_Identity=34.6534653465347, Blast_Score=149, Evalue=3e-36,
Organism=Escherichia coli, GI87081793, Length=279, Percent_Identity=23.2974910394265, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17556106, Length=316, Percent_Identity=31.3291139240506, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24667554, Length=312, Percent_Identity=32.6923076923077, Blast_Score=126, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 34393; Mature: 34262

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVTVAEQPVTNSLVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGFLQPMGYVG
CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCC
QIQVIQANLRYPDSVRRAVEGADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAVGA
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLVHVSAIGASASSASDYAKTKAEGEAAVRAAVPDAIILRPSIVFGPEDDFFNKFAGMAR
HHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHH
MSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLLRTTLH
HCCCCEEECCCCCEECEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
EIGAKRPLVSLPFGVAACVGSIAQKLPGAPITKDQVELLKSDNVVSDAAKAEGRTLEGLG
HHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEECCCC
VTPTALESILGSYLWRFRKAGQFTHIPT
CCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDVTVAEQPVTNSLVTVFGGSGFLGRHVVRALARRGYRVRVAVRRPELAGFLQPMGYVG
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCC
QIQVIQANLRYPDSVRRAVEGADAVVNLVGILAPSGRQSFKAVQAAGARAVAEAAAAVGA
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLVHVSAIGASASSASDYAKTKAEGEAAVRAAVPDAIILRPSIVFGPEDDFFNKFAGMAR
HHHEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHH
MSPVLPLIGGGQTRFQPVFVGDVAEAVERAVEGLAKPGATYELGGPEVRTFEQLLRTTLH
HCCCCEEECCCCCEECEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHH
EIGAKRPLVSLPFGVAACVGSIAQKLPGAPITKDQVELLKSDNVVSDAAKAEGRTLEGLG
HHCCCCCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEECCCC
VTPTALESILGSYLWRFRKAGQFTHIPT
CCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]