The gene/protein map for NC_009937 is currently unavailable.
Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158422597

Identifier: 158422597

GI number: 158422597

Start: 1082119

End: 1082829

Strand: Reverse

Name: 158422597

Synonym: AZC_0973

Alternate gene names: NA

Gene position: 1082829-1082119 (Counterclockwise)

Preceding gene: 158422598

Following gene: 158422591

Centisome position: 20.17

GC content: 68.21

Gene sequence:

>711_bases
TTGGACCTTCCGATGCGTATCGGCGTTTTGATCGGCGTTTTTACCGTGGCCTGCGGCGGTGCCCATGCGGCAGACGACGC
CCTGCCCCGGCTCGGGCGCAGCGGCGATTTCTCACTGGCGCTGCCGACCCTCGATGACGATGGCCCCGCCACCGCCGGCA
CGACGGCGGGGCAATGGTATTTGCGCACGAACTTCGGCGTGGGCGGGGTGCAGGGGAGCGTCGCAGGCGCCACGCGGGCG
AACTCCGGGACCGACACCGCCCGCACGTTCGGCGTGGGCGTCGGCTATCGTTTCCTGCCCTGGCTGCGGGGCGACATCAC
CGCGGACTACATGTTGGCGCTGACCGCCGACCGGCCGCTGGGCGTGAATTCCCTGCACACCGGCGCGGTGATGGCCAATC
TCTATTGGGACATGTTCACCATCGCCAACATCACGCCCTATGTGGGCGGCGGCGTCGGCTTCGGCATGGCGAACGTGCGC
TTCAAGCCCTTCTTCGCGCCGGCGGGCTGGGGGCAGACGGACGTCGGCTTCGCCTGGAACGCCACTGCGGGCGTCGCCTG
GTCCTTCGCGCAGGACTGGTCACTCGACGTGAGCTACCGCTACGCCGCCATGGGCACGCAGGAGTTCACCACCTACACGG
GTGTCCCCTACAGCATCGACGACATGGCGACGCACCAGTTGCGCATCGGCCTGCGGCGCACCTTCAACTGA

Upstream 100 bases:

>100_bases
CCGCGCGCCTTGCTGCGAGAAGGCAATTCGGTAGGGTTAAGCAGAAGTTAAATTCTTCTGCTTCATTCTTCGAAACGAAT
CGGCTCCCTGCCGCTCGAGT

Downstream 100 bases:

>100_bases
AGCTCAGATGATCCGTGTGCGCGCGGCCCGTAGCCGCCTGATGTAATCAAGCGCGCTCTGCGGCTCGTAGGGGCGGGCCA
GATGGGGGCCCTGGTCACAC

Product: opacity protein

Products: NA

Alternate protein names: Opacity Protein And Related Surface Antigens-Like Protein; Porin Subfamily; Opacity Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA
NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR
FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN

Sequences:

>Translated_236_residues
MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA
NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR
FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN
>Mature_236_residues
MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA
NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR
FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25107; Mature: 25107

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWY
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEE
LRTNFGVGGVQGSVAGATRANSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPL
EEECCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHCCCCCEEEEEEEECCCCC
GVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVRFKPFFAPAGWGQTDVGFAWN
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC
ATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN
CCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHEEEEHCCCC
>Mature Secondary Structure
MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWY
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEE
LRTNFGVGGVQGSVAGATRANSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPL
EEECCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHCCCCCEEEEEEEECCCCC
GVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVRFKPFFAPAGWGQTDVGFAWN
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC
ATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN
CCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHEEEEHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA