| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158422597
Identifier: 158422597
GI number: 158422597
Start: 1082119
End: 1082829
Strand: Reverse
Name: 158422597
Synonym: AZC_0973
Alternate gene names: NA
Gene position: 1082829-1082119 (Counterclockwise)
Preceding gene: 158422598
Following gene: 158422591
Centisome position: 20.17
GC content: 68.21
Gene sequence:
>711_bases TTGGACCTTCCGATGCGTATCGGCGTTTTGATCGGCGTTTTTACCGTGGCCTGCGGCGGTGCCCATGCGGCAGACGACGC CCTGCCCCGGCTCGGGCGCAGCGGCGATTTCTCACTGGCGCTGCCGACCCTCGATGACGATGGCCCCGCCACCGCCGGCA CGACGGCGGGGCAATGGTATTTGCGCACGAACTTCGGCGTGGGCGGGGTGCAGGGGAGCGTCGCAGGCGCCACGCGGGCG AACTCCGGGACCGACACCGCCCGCACGTTCGGCGTGGGCGTCGGCTATCGTTTCCTGCCCTGGCTGCGGGGCGACATCAC CGCGGACTACATGTTGGCGCTGACCGCCGACCGGCCGCTGGGCGTGAATTCCCTGCACACCGGCGCGGTGATGGCCAATC TCTATTGGGACATGTTCACCATCGCCAACATCACGCCCTATGTGGGCGGCGGCGTCGGCTTCGGCATGGCGAACGTGCGC TTCAAGCCCTTCTTCGCGCCGGCGGGCTGGGGGCAGACGGACGTCGGCTTCGCCTGGAACGCCACTGCGGGCGTCGCCTG GTCCTTCGCGCAGGACTGGTCACTCGACGTGAGCTACCGCTACGCCGCCATGGGCACGCAGGAGTTCACCACCTACACGG GTGTCCCCTACAGCATCGACGACATGGCGACGCACCAGTTGCGCATCGGCCTGCGGCGCACCTTCAACTGA
Upstream 100 bases:
>100_bases CCGCGCGCCTTGCTGCGAGAAGGCAATTCGGTAGGGTTAAGCAGAAGTTAAATTCTTCTGCTTCATTCTTCGAAACGAAT CGGCTCCCTGCCGCTCGAGT
Downstream 100 bases:
>100_bases AGCTCAGATGATCCGTGTGCGCGCGGCCCGTAGCCGCCTGATGTAATCAAGCGCGCTCTGCGGCTCGTAGGGGCGGGCCA GATGGGGGCCCTGGTCACAC
Product: opacity protein
Products: NA
Alternate protein names: Opacity Protein And Related Surface Antigens-Like Protein; Porin Subfamily; Opacity Protein
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN
Sequences:
>Translated_236_residues MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN >Mature_236_residues MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWYLRTNFGVGGVQGSVAGATRA NSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPLGVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVR FKPFFAPAGWGQTDVGFAWNATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN
Specific function: Unknown
COG id: COG3637
COG function: function code M; Opacity protein and related surface antigens
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25107; Mature: 25107
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWY CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEE LRTNFGVGGVQGSVAGATRANSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPL EEECCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHCCCCCEEEEEEEECCCCC GVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVRFKPFFAPAGWGQTDVGFAWN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC ATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN CCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHEEEEHCCCC >Mature Secondary Structure MDLPMRIGVLIGVFTVACGGAHAADDALPRLGRSGDFSLALPTLDDDGPATAGTTAGQWY CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEE LRTNFGVGGVQGSVAGATRANSGTDTARTFGVGVGYRFLPWLRGDITADYMLALTADRPL EEECCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCHHHHHHHCCCCCEEEEEEEECCCCC GVNSLHTGAVMANLYWDMFTIANITPYVGGGVGFGMANVRFKPFFAPAGWGQTDVGFAWN CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC ATAGVAWSFAQDWSLDVSYRYAAMGTQEFTTYTGVPYSIDDMATHQLRIGLRRTFN CCCCEEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCHHHHHHHHHEEEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA