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The map label for this gene is aapJ [H]

Identifier: 158422580

GI number: 158422580

Start: 1068709

End: 1069719

Strand: Reverse

Name: aapJ [H]

Synonym: AZC_0956

Alternate gene names: 158422580

Gene position: 1069719-1068709 (Counterclockwise)

Preceding gene: 158422581

Following gene: 158422579

Centisome position: 19.92

GC content: 66.47

Gene sequence:

>1011_bases
ATGAAGACCCTTTTCGCGCTCGTAGCCGGCGCCGCCGTGGCGTTCACCGCCCCGGCCGCCATGGCCCAGACCCTCAAGGC
GGTGAAGGACCGCGGCACGCTCAACTGCGGCGTCAGCACCGGCATTCCGGGCTTCTCCCAGCAGGTGGACGGCAAGTGGT
CGGGCTTCGACGTGGACTTCTGCCGCGCGGTGGCCGCCGCCGTGCTGAACGACCCGGCGAAGGTCAACTTCGTGCCGCTC
AATGCCGAGGACCGCTTCACCGCGCTGTCCGGCAGCAAGGTGGACCTGCTCTCGCGCAACACCACCTGGACGCTGGAGCG
TGAGGCCAAGCAGAAGTTCCTGTTCGGCGCCGTTACCTATTTCGACGGCCAGGGCTTCCTCGTCCCGGCCGCGCGCAAGA
TCGAATCGGCCCTCGAGCTCGACGGCTCCAAGGTCTGCGTGCAGGTCGGCACCACCGCCGCCAGCTACGCCGAGGACTAC
TTCAAGACCAACAACATGAAGCTGGAACTGGTCACCCTGCCGACCGTGCAGGATCTGGTGAAGGCTTATGAGAACGGCAC
CTGCAACACCATCTCCACGGACGTGTCGGCGCTCTATGCGCTGCGCACCGGCTTTGCCAAGCCCGCCTCCCACATCGTCC
TGCCCGACGTCATCACCAAGGAGCCCCTCGGCCCCGTGGTGCGCCAGGGCGACGACGAGTGGTTCAATGTGGTGAAGTGG
ACCCACTACGTGATGATCAACGGCGAGGAACTGGGCGTCTCCTCCCTCAGCCTCGACGAAGCGCTGAAGTCGCAGAAGCC
GGACGTGAAGCGCCTCGTCGGCACGGACGGCGACTTCGGCACCGAACTCGGCCTCACCAAGGATTTCGCGGTGCGCATCA
TCCGCGCCGTCGGCAATTACGGCGAGGCCTTCGAGCGCAACATCGGCACGGGCTCCAAGCTCGCCATTCCGCGCGGCGTG
AACCAGCTCTGGAGCGCCGGCGGCATCCAGTACGCCCCGCCGGTCCGCTGA

Upstream 100 bases:

>100_bases
TGCCAGTGGGCACGAAGGTCATCATTCGTCAGGCCGTCACGCTTTGAGCGGCCTTCTCTCTCTCCGTTCCGGGAATTGCG
TGATGACGCGAGGCCTTTCC

Downstream 100 bases:

>100_bases
GGCACGACGCACGCGGGACAAAGGGCCGTTTCCTTCCGGAAGCGGCCCTTTTTGCTGGCGTCACGGCTCAGCTCACGGGT
CTGTGACACCGCAATGCAAC

Product: extracellular substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQQVDGKWSGFDVDFCRAVAAAVLNDPAKVNFVPL
NAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDY
FKTNNMKLELVTLPTVQDLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW
THYVMINGEELGVSSLSLDEALKSQKPDVKRLVGTDGDFGTELGLTKDFAVRIIRAVGNYGEAFERNIGTGSKLAIPRGV
NQLWSAGGIQYAPPVR

Sequences:

>Translated_336_residues
MKTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQQVDGKWSGFDVDFCRAVAAAVLNDPAKVNFVPL
NAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDY
FKTNNMKLELVTLPTVQDLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW
THYVMINGEELGVSSLSLDEALKSQKPDVKRLVGTDGDFGTELGLTKDFAVRIIRAVGNYGEAFERNIGTGSKLAIPRGV
NQLWSAGGIQYAPPVR
>Mature_336_residues
MKTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQQVDGKWSGFDVDFCRAVAAAVLNDPAKVNFVPL
NAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTYFDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDY
FKTNNMKLELVTLPTVQDLVKAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW
THYVMINGEELGVSSLSLDEALKSQKPDVKRLVGTDGDFGTELGLTKDFAVRIIRAVGNYGEAFERNIGTGSKLAIPRGV
NQLWSAGGIQYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36140; Mature: 36140

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQQVDGKWSGFDVDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCHHH
CRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTY
HHHHHHHHHCCCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEEEHHHHHHHHEEEEEE
FDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQDLV
ECCCCEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHH
KAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCCHHHHCCCHHHHHHEEE
THYVMINGEELGVSSLSLDEALKSQKPDVKRLVGTDGDFGTELGLTKDFAVRIIRAVGNY
EEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR
HHHHHHCCCCCCEEECCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTLFALVAGAAVAFTAPAAMAQTLKAVKDRGTLNCGVSTGIPGFSQQVDGKWSGFDVDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCHHH
CRAVAAAVLNDPAKVNFVPLNAEDRFTALSGSKVDLLSRNTTWTLEREAKQKFLFGAVTY
HHHHHHHHHCCCCEEEEEEECCCCCEEECCCCEEEEEECCCEEEEEHHHHHHHHEEEEEE
FDGQGFLVPAARKIESALELDGSKVCVQVGTTAASYAEDYFKTNNMKLELVTLPTVQDLV
ECCCCEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHH
KAYENGTCNTISTDVSALYALRTGFAKPASHIVLPDVITKEPLGPVVRQGDDEWFNVVKW
HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCHHHCCCCCCHHHHCCCHHHHHHEEE
THYVMINGEELGVSSLSLDEALKSQKPDVKRLVGTDGDFGTELGLTKDFAVRIIRAVGNY
EEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCH
GEAFERNIGTGSKLAIPRGVNQLWSAGGIQYAPPVR
HHHHHHCCCCCCEEECCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]