| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is ytnP [H]
Identifier: 158422579
GI number: 158422579
Start: 1067634
End: 1068518
Strand: Reverse
Name: ytnP [H]
Synonym: AZC_0955
Alternate gene names: 158422579
Gene position: 1068518-1067634 (Counterclockwise)
Preceding gene: 158422580
Following gene: 158422577
Centisome position: 19.9
GC content: 67.8
Gene sequence:
>885_bases ATGCGCGCCCTGCCTCCGCTTCCGCCCGCCGCCTTCCGCTACAAGGTGGGTGCCGTCACCGTGACCGCCATTCCGGACGG CACACGGTCCTTTCCGCTCGCCGAAGGCTTCGTGCGCAACCAGCCGCTGGAGGCGGTGCAGGCCGCCCTGCGCGCGGCCT TCCTGCCGGAAGACCATCTGACCATCTATTTCAATCCGCTGCTGCTGGAGATCGCCGGCCGCCGGGTGCTGATCGACACC GGCTTCGGCCCGCAGGCGGAGCCTTCCACGGTGGGGCGTCTGCATCACAATCTGGAAGCCATCGGGGTGGGCGCCGCCAC CATCGACACGGTGGTGATCTCCCATTTCCACCTCGACCACATCAATGGCCTTGTCGCCCCCGACGGCTCGCCGGCCTTCC CGAATGCCAAGGTGCTGGTGCCCGCGCGGGAGCGCGACTTCTGGCTCAACCCGGCCAATGCCGCCGGCGCGCCGGACAAT CTCAAGCCCGCCTTCGCCAATGCCCAGCGCGTGCTGGACGTCGTCGCAGCCCATGTGAGCGAATATGCATGGGACCAGGA GATCCTTCCCGGCCTCACCACCATCGGCACGCCCGGACACACGCCGGGGCACACCTCCTTCATGCTGGATTCGGAAGGCG CGCAGCTCTTCATCCAGTCGGACCTGACGAACACGCCCTATCTGTTCGTTCGCAATCCCGGCTGGCATGCGGCCTTCGAC ATCGATCCGGAGCTGGCCGAGAAGAACCGCCGTCACTGGCTGGGCCGCGCCGCCGCCGAGCGCCTTCTGGTGGCCGGCTT CCACTATCCCTTCCCGAGTGCCGCCCATCTGGAAGCCCACCACGACGGCTTCCGCTTCCACCCGGTGCCGTGGGTCTCCC TCTGA
Upstream 100 bases:
>100_bases GCAATGCAACGCTTTCCCCTAAACGCCCCAGCACTGCGGCCGCTCACGACCGCGTGACCCAACGGCAGCCCCTCCGCTGC CCGGATACGGAAACAGCTTC
Downstream 100 bases:
>100_bases GGGCCGGGCGCTGACGACGTTCCCGCGCCCTCAGAACGTCTCCGAGGCGATCCAGCCGAGAAAGGCCGTGCTGCCGTCTT CCACCGGCAGCACGAAAACC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MRALPPLPPAAFRYKVGAVTVTAIPDGTRSFPLAEGFVRNQPLEAVQAALRAAFLPEDHLTIYFNPLLLEIAGRRVLIDT GFGPQAEPSTVGRLHHNLEAIGVGAATIDTVVISHFHLDHINGLVAPDGSPAFPNAKVLVPARERDFWLNPANAAGAPDN LKPAFANAQRVLDVVAAHVSEYAWDQEILPGLTTIGTPGHTPGHTSFMLDSEGAQLFIQSDLTNTPYLFVRNPGWHAAFD IDPELAEKNRRHWLGRAAAERLLVAGFHYPFPSAAHLEAHHDGFRFHPVPWVSL
Sequences:
>Translated_294_residues MRALPPLPPAAFRYKVGAVTVTAIPDGTRSFPLAEGFVRNQPLEAVQAALRAAFLPEDHLTIYFNPLLLEIAGRRVLIDT GFGPQAEPSTVGRLHHNLEAIGVGAATIDTVVISHFHLDHINGLVAPDGSPAFPNAKVLVPARERDFWLNPANAAGAPDN LKPAFANAQRVLDVVAAHVSEYAWDQEILPGLTTIGTPGHTPGHTSFMLDSEGAQLFIQSDLTNTPYLFVRNPGWHAAFD IDPELAEKNRRHWLGRAAAERLLVAGFHYPFPSAAHLEAHHDGFRFHPVPWVSL >Mature_294_residues MRALPPLPPAAFRYKVGAVTVTAIPDGTRSFPLAEGFVRNQPLEAVQAALRAAFLPEDHLTIYFNPLLLEIAGRRVLIDT GFGPQAEPSTVGRLHHNLEAIGVGAATIDTVVISHFHLDHINGLVAPDGSPAFPNAKVLVPARERDFWLNPANAAGAPDN LKPAFANAQRVLDVVAAHVSEYAWDQEILPGLTTIGTPGHTPGHTSFMLDSEGAQLFIQSDLTNTPYLFVRNPGWHAAFD IDPELAEKNRRHWLGRAAAERLLVAGFHYPFPSAAHLEAHHDGFRFHPVPWVSL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32006; Mature: 32006
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALPPLPPAAFRYKVGAVTVTAIPDGTRSFPLAEGFVRNQPLEAVQAALRAAFLPEDHL CCCCCCCCCHHHEEEECEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCE TIYFNPLLLEIAGRRVLIDTGFGPQAEPSTVGRLHHNLEAIGVGAATIDTVVISHFHLDH EEEECCEEEEECCCEEEEECCCCCCCCCHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHH INGLVAPDGSPAFPNAKVLVPARERDFWLNPANAAGAPDNLKPAFANAQRVLDVVAAHVS CCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EYAWDQEILPGLTTIGTPGHTPGHTSFMLDSEGAQLFIQSDLTNTPYLFVRNPGWHAAFD HHCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEEE IDPELAEKNRRHWLGRAAAERLLVAGFHYPFPSAAHLEAHHDGFRFHPVPWVSL CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCEEECCCCCCCC >Mature Secondary Structure MRALPPLPPAAFRYKVGAVTVTAIPDGTRSFPLAEGFVRNQPLEAVQAALRAAFLPEDHL CCCCCCCCCHHHEEEECEEEEEECCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCE TIYFNPLLLEIAGRRVLIDTGFGPQAEPSTVGRLHHNLEAIGVGAATIDTVVISHFHLDH EEEECCEEEEECCCEEEEECCCCCCCCCHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHH INGLVAPDGSPAFPNAKVLVPARERDFWLNPANAAGAPDNLKPAFANAQRVLDVVAAHVS CCCEECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH EYAWDQEILPGLTTIGTPGHTPGHTSFMLDSEGAQLFIQSDLTNTPYLFVRNPGWHAAFD HHCCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEECCCCEEEEE IDPELAEKNRRHWLGRAAAERLLVAGFHYPFPSAAHLEAHHDGFRFHPVPWVSL CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]