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The map label for this gene is rpfG [H]

Identifier: 158422538

GI number: 158422538

Start: 1023929

End: 1025326

Strand: Direct

Name: rpfG [H]

Synonym: AZC_0914

Alternate gene names: 158422538

Gene position: 1023929-1025326 (Clockwise)

Preceding gene: 158422536

Following gene: 158422539

Centisome position: 19.07

GC content: 69.67

Gene sequence:

>1398_bases
GTGACGCGGAACGCGGACATGACGGGGGCGTCTGAGGACAGGACGTCCGCACCCGGCGCTGCGGCGACGGCGGCCGATCA
TGTCCTGCTGGCGGATCTGCTGGCCGCGCTCAGCCATGCGCTCGACCTCACCGAGGGCCAGGCGGAAGGCCATTGCCTGC
GCTGCTGCTGGATCGGGGTGCGGATCGGCCAGGAGCTGGGCCTCCCCGAGGGGCAACTGGCGGACCTGTCCTATACGCTG
ATCCTCAAGGATCTCGGTTGCAGCTCCAATGCGGCGCGGATCTGCGAACTCTATCTGGCCGACGACCGCACCATCAAATC
CGGTTCGAAGCATCTGGATGGCAGCCTCAAGCAGGCGCTGCGCTTCGTTCTCGCGCATACCGGGCTGCAGGCGGGGCCGG
CGGAGCGCCTGCGCGCCATCGTCCGCATCGTCCGCAACGGTGGCAGACTGACGCGCGAACTGATCGAGACCCGCTGCGTG
CGCGGCGCGGAGATCGCCCGCCTCATGCGTTTTTCCGACGCGGTGGCACGGGGCATTCGCGGTCTGGATGAACATTGGGA
CGGTTCCGGCAAACCGGGCGGCCTGAAGGGCACCGCCATCCCGCTGTTCTCCCGCATCGCGCTGCTGGCGCAGGTGGCGG
ACGTGTTCTTCACCGCCGGCGGACCCGAGGCGGCGGTGGCGGAAGTCACCAGCCGCGCGGACGGCTGGTTCGAGCCCCGT
CTCGTCGAGGCTTTCCGCCGGGTGGCGGCGCAGCCGGGCTTCTGGGAGACGTTGGCCTCGGCGGAGCTTCAGGAGGCCAT
CGCCGGCCAGGTGCCGCTGCATGTGCGGGCAACGGTGGATGACGACTATCTCGACGACATCGCCGCCGCCTTCGCGCAGG
TGATCGACGCCAAGAGCCCCTTTACCGCCGGCCACAGCGCCCGCGTGACCGATGTGGCGGACACCATTGCCGCCGAGATG
GGCCTGCCGGACCTGCGCCGGCGCTGGTTGCGGCGGGCGGCGCTGCTGCACGACATCGGCAAGCTCGGCGTCAGCAACAC
CATTCTCGACAAGCCCGGTCCCCTGGAGCCGGAGGAGCGGGCGGCCATGCAGCGCCATGCGGAGCTATCGGAAACCATCC
TCGCGCGCATCCGCCCCTTTCGCCATCTGGCCGCCGTCGCCGGTGCCCATCACGAGCGCCTGGACGGAAAAGGCTATCCG
CGCGGCCTTTCGGGGGCGACCATCGATCTCGACACCCGGATCATCACCACCGCCGACATCTTCGATGCCCTCACCGCCGA
TCGGCCCTATCGCGCGGCCATGTCCGTGGCGCGGGCGCTGGAGATCATGGAAGAGATGAGTGGCACCGCTCTGGACCCCG
CCTGCCTGGCGGCGCTGCGGCGGGCGCTGGATCGGTGA

Upstream 100 bases:

>100_bases
TCCACTTGCGGGCGGCAAGGGCAGGTCCACTCGCCGTCACGGGGGCACCAGCCCCGGGCGAGCACGCGCTGCTAAGGCAG
AAGGCGGATCAGGAGGCAGT

Downstream 100 bases:

>100_bases
GGTAAGGGCTTCCTGTAGGAGGCCAGTGTGCTCGCCGCTCGCGCGCTGGCCGGCCCGTGCCACTCTTCCTGTTCGGGTCA
ACGACACAGCCCAGAGAATT

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTRNADMTGASEDRTSAPGAAATAADHVLLADLLAALSHALDLTEGQAEGHCLRCCWIGVRIGQELGLPEGQLADLSYTL
ILKDLGCSSNAARICELYLADDRTIKSGSKHLDGSLKQALRFVLAHTGLQAGPAERLRAIVRIVRNGGRLTRELIETRCV
RGAEIARLMRFSDAVARGIRGLDEHWDGSGKPGGLKGTAIPLFSRIALLAQVADVFFTAGGPEAAVAEVTSRADGWFEPR
LVEAFRRVAAQPGFWETLASAELQEAIAGQVPLHVRATVDDDYLDDIAAAFAQVIDAKSPFTAGHSARVTDVADTIAAEM
GLPDLRRRWLRRAALLHDIGKLGVSNTILDKPGPLEPEERAAMQRHAELSETILARIRPFRHLAAVAGAHHERLDGKGYP
RGLSGATIDLDTRIITTADIFDALTADRPYRAAMSVARALEIMEEMSGTALDPACLAALRRALDR

Sequences:

>Translated_465_residues
MTRNADMTGASEDRTSAPGAAATAADHVLLADLLAALSHALDLTEGQAEGHCLRCCWIGVRIGQELGLPEGQLADLSYTL
ILKDLGCSSNAARICELYLADDRTIKSGSKHLDGSLKQALRFVLAHTGLQAGPAERLRAIVRIVRNGGRLTRELIETRCV
RGAEIARLMRFSDAVARGIRGLDEHWDGSGKPGGLKGTAIPLFSRIALLAQVADVFFTAGGPEAAVAEVTSRADGWFEPR
LVEAFRRVAAQPGFWETLASAELQEAIAGQVPLHVRATVDDDYLDDIAAAFAQVIDAKSPFTAGHSARVTDVADTIAAEM
GLPDLRRRWLRRAALLHDIGKLGVSNTILDKPGPLEPEERAAMQRHAELSETILARIRPFRHLAAVAGAHHERLDGKGYP
RGLSGATIDLDTRIITTADIFDALTADRPYRAAMSVARALEIMEEMSGTALDPACLAALRRALDR
>Mature_464_residues
TRNADMTGASEDRTSAPGAAATAADHVLLADLLAALSHALDLTEGQAEGHCLRCCWIGVRIGQELGLPEGQLADLSYTLI
LKDLGCSSNAARICELYLADDRTIKSGSKHLDGSLKQALRFVLAHTGLQAGPAERLRAIVRIVRNGGRLTRELIETRCVR
GAEIARLMRFSDAVARGIRGLDEHWDGSGKPGGLKGTAIPLFSRIALLAQVADVFFTAGGPEAAVAEVTSRADGWFEPRL
VEAFRRVAAQPGFWETLASAELQEAIAGQVPLHVRATVDDDYLDDIAAAFAQVIDAKSPFTAGHSARVTDVADTIAAEMG
LPDLRRRWLRRAALLHDIGKLGVSNTILDKPGPLEPEERAAMQRHAELSETILARIRPFRHLAAVAGAHHERLDGKGYPR
GLSGATIDLDTRIITTADIFDALTADRPYRAAMSVARALEIMEEMSGTALDPACLAALRRALDR

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 49970; Mature: 49838

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNADMTGASEDRTSAPGAAATAADHVLLADLLAALSHALDLTEGQAEGHCLRCCWIGV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
RIGQELGLPEGQLADLSYTLILKDLGCSSNAARICELYLADDRTIKSGSKHLDGSLKQAL
HHHHHCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCHHCCHHHHHHH
RFVLAHTGLQAGPAERLRAIVRIVRNGGRLTRELIETRCVRGAEIARLMRFSDAVARGIR
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLDEHWDGSGKPGGLKGTAIPLFSRIALLAQVADVFFTAGGPEAAVAEVTSRADGWFEPR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
LVEAFRRVAAQPGFWETLASAELQEAIAGQVPLHVRATVDDDYLDDIAAAFAQVIDAKSP
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
FTAGHSARVTDVADTIAAEMGLPDLRRRWLRRAALLHDIGKLGVSNTILDKPGPLEPEER
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AAMQRHAELSETILARIRPFRHLAAVAGAHHERLDGKGYPRGLSGATIDLDTRIITTADI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEHHHH
FDALTADRPYRAAMSVARALEIMEEMSGTALDPACLAALRRALDR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRNADMTGASEDRTSAPGAAATAADHVLLADLLAALSHALDLTEGQAEGHCLRCCWIGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHH
RIGQELGLPEGQLADLSYTLILKDLGCSSNAARICELYLADDRTIKSGSKHLDGSLKQAL
HHHHHCCCCCCCHHCCHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHCCCHHCCHHHHHHH
RFVLAHTGLQAGPAERLRAIVRIVRNGGRLTRELIETRCVRGAEIARLMRFSDAVARGIR
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GLDEHWDGSGKPGGLKGTAIPLFSRIALLAQVADVFFTAGGPEAAVAEVTSRADGWFEPR
CHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHH
LVEAFRRVAAQPGFWETLASAELQEAIAGQVPLHVRATVDDDYLDDIAAAFAQVIDAKSP
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC
FTAGHSARVTDVADTIAAEMGLPDLRRRWLRRAALLHDIGKLGVSNTILDKPGPLEPEER
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AAMQRHAELSETILARIRPFRHLAAVAGAHHERLDGKGYPRGLSGATIDLDTRIITTADI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEHHHH
FDALTADRPYRAAMSVARALEIMEEMSGTALDPACLAALRRALDR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]