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The map label for this gene is ynfA [C]

Identifier: 158422533

GI number: 158422533

Start: 1017858

End: 1018178

Strand: Reverse

Name: ynfA [C]

Synonym: AZC_0909

Alternate gene names: 158422533

Gene position: 1018178-1017858 (Counterclockwise)

Preceding gene: 158422534

Following gene: 158422530

Centisome position: 18.96

GC content: 71.65

Gene sequence:

>321_bases
ATGAGCCTGCCCCTCTTTGCGCTGGCCGCGCTCGCCGAGATCGCCGGCTGCTTTGCCTTCTGGCATGTGGTGCGCGCGGG
CGGCAGCCCGCTTTGGCTCGCGCCCGGCGTCCTCAGCCTCGTCGCCTTCGCCGCCCTTCTGACGCAGGTGGAAGCGGATG
CCGCCGGTCGCGCCTTCGCCGCCTATGGCGGCATCTATATCCTCGCCTCACTCGGCTGGATGTGGGCGGCGGAAGGCGTG
CGGCCCGATCGGTTCGATGCGCTGGGCGCCGCCATCTGCCTTGCCGGGGCCTGCGTCATCCTGTTCGCCCCGCGCGGCTG
A

Upstream 100 bases:

>100_bases
TGACCGACGACTGCCGGGCCGCCGCGCAGGTGGCACGGCGGGTCGCTGCCGCGGAACCCGGCTGGTGGGTCCGCCCCACC
GTGCTGCGCTAGGGGTGCCC

Downstream 100 bases:

>100_bases
GCCGGGGCGGAAGACCGGGAGCGTGGAACGCCCCCGGTCCGGTCCTTACGCCGCCGACAGATCGTTCACGAAGGCCTGCA
CCGTCCGGTGGAGGTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSLPLFALAALAEIAGCFAFWHVVRAGGSPLWLAPGVLSLVAFAALLTQVEADAAGRAFAAYGGIYILASLGWMWAAEGV
RPDRFDALGAAICLAGACVILFAPRG

Sequences:

>Translated_106_residues
MSLPLFALAALAEIAGCFAFWHVVRAGGSPLWLAPGVLSLVAFAALLTQVEADAAGRAFAAYGGIYILASLGWMWAAEGV
RPDRFDALGAAICLAGACVILFAPRG
>Mature_105_residues
SLPLFALAALAEIAGCFAFWHVVRAGGSPLWLAPGVLSLVAFAALLTQVEADAAGRAFAAYGGIYILASLGWMWAAEGVR
PDRFDALGAAICLAGACVILFAPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=97, Percent_Identity=40.2061855670103, Blast_Score=62, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y909_AZOC5 (A8HU57)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001523825.1
- GeneID:   5692194
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_0909
- HOGENOM:   HBG313568
- OMA:   ALWVIPA
- ProtClustDB:   CLSK979408
- BioCyc:   ACAU438753:AZC_0909-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 10895; Mature: 10764

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1a55c178)-; HASH(0x1d747550)-; HASH(0x1e56ff7c)-; HASH(0x1db4b444)-;

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLFALAALAEIAGCFAFWHVVRAGGSPLWLAPGVLSLVAFAALLTQVEADAAGRAFA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHH
AYGGIYILASLGWMWAAEGVRPDRFDALGAAICLAGACVILFAPRG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCH
>Mature Secondary Structure 
SLPLFALAALAEIAGCFAFWHVVRAGGSPLWLAPGVLSLVAFAALLTQVEADAAGRAFA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHH
AYGGIYILASLGWMWAAEGVRPDRFDALGAAICLAGACVILFAPRG
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA