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The map label for this gene is yfiC [C]

Identifier: 158422529

GI number: 158422529

Start: 1013377

End: 1014084

Strand: Reverse

Name: yfiC [C]

Synonym: AZC_0905

Alternate gene names: 158422529

Gene position: 1014084-1013377 (Counterclockwise)

Preceding gene: 158422530

Following gene: 158422528

Centisome position: 18.89

GC content: 75.28

Gene sequence:

>708_bases
ATGCTGACCCAGCCGAGGACCGGCCACCGCGCCGGGCATGATGCGCTGCTGCTCGCGGCCCTCGCCCCCGCGCAGGCCCG
CCGCATTGTCGATCTGGGCGCAGGCGTCGGCACGGCGGGCCTTGCGGTGCTTGTGCGCCTTCGCGAGGCGAGCGCGCATC
TCGTGGAACTCGATCCCGCGACGGCGGCCCTCGCCCGGCAGAATGCGGCTGGCAACGGCATGTCGGACCGCTGCGCGATC
GTGGAGGCCGATGTGCGGACGCTGGGCAAGCCGGCGGGGCCGGCCGAGCCCGCCGCGCAGGCCGCCGATCTCGTGATCGC
CAACCCGCCGTTCAATGCGCGGGCCGCCCACCAGACCTCTCCCCACGCCCGCCGCGCCACCGCCCATATGGCGGATGGCG
AAACGCTGATGGACTGGGTGCTCGCCGCCTATCGCTGCCTGAAGCCGGGCGGGCAGGTCGGCCTCATCCTGCGACCGGCC
GATCTTGCCACGCTGCTCGACGCCCTCGCCGGGCGCTTCGGCGCGGCGGAGCTGCTGCCCGTCCATGCCCGCGCCGATGC
ACCGGCGGTGCGGCTGCTCGTGCGGGCCGTGAAAGGCCGCCGCACGCCCCCCGCCATCCGCCCCGGCCTCATCCTCGCCG
AGGCCGACGGGCGCACGACCGCCACCGCCGATGCGGTGCTGCGGGGAGAGGCCGGCCTTATCCCCTGA

Upstream 100 bases:

>100_bases
CTGCTCACGGAGGCGGGCTTCGCGGATGTCCTGCGCCGGGATGATTGAAGGCCCCCTGCCCTTCGAGACCACGCGGGATG
CCCTGCTGGGCGGCCGGCTG

Downstream 100 bases:

>100_bases
GCAGGTGCGCATCCCGGTCGCATGGTTAACAAACGCCCTTACGTCAGGCGGCGATGCCTTTTATGATCCGCAGCATTCGT
CTTCGTCTGCGCCGGGTTTT

Product: O-methyltransferase

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MLTQPRTGHRAGHDALLLAALAPAQARRIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAI
VEADVRTLGKPAGPAEPAAQAADLVIANPPFNARAAHQTSPHARRATAHMADGETLMDWVLAAYRCLKPGGQVGLILRPA
DLATLLDALAGRFGAAELLPVHARADAPAVRLLVRAVKGRRTPPAIRPGLILAEADGRTTATADAVLRGEAGLIP

Sequences:

>Translated_235_residues
MLTQPRTGHRAGHDALLLAALAPAQARRIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAI
VEADVRTLGKPAGPAEPAAQAADLVIANPPFNARAAHQTSPHARRATAHMADGETLMDWVLAAYRCLKPGGQVGLILRPA
DLATLLDALAGRFGAAELLPVHARADAPAVRLLVRAVKGRRTPPAIRPGLILAEADGRTTATADAVLRGEAGLIP
>Mature_235_residues
MLTQPRTGHRAGHDALLLAALAPAQARRIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAI
VEADVRTLGKPAGPAEPAAQAADLVIANPPFNARAAHQTSPHARRATAHMADGETLMDWVLAAYRCLKPGGQVGLILRPA
DLATLLDALAGRFGAAELLPVHARADAPAVRLLVRAVKGRRTPPAIRPGLILAEADGRTTATADAVLRGEAGLIP

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR007848
- InterPro:   IPR022882 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.55 [H]

Molecular weight: Translated: 24134; Mature: 24134

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQPRTGHRAGHDALLLAALAPAQARRIVDLGAGVGTAGLAVLVRLREASAHLVELDPA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECHH
TAALARQNAAGNGMSDRCAIVEADVRTLGKPAGPAEPAAQAADLVIANPPFNARAAHQTS
HHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCC
PHARRATAHMADGETLMDWVLAAYRCLKPGGQVGLILRPADLATLLDALAGRFGAAELLP
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHEEE
VHARADAPAVRLLVRAVKGRRTPPAIRPGLILAEADGRTTATADAVLRGEAGLIP
EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHEECCCCCCC
>Mature Secondary Structure
MLTQPRTGHRAGHDALLLAALAPAQARRIVDLGAGVGTAGLAVLVRLREASAHLVELDPA
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECHH
TAALARQNAAGNGMSDRCAIVEADVRTLGKPAGPAEPAAQAADLVIANPPFNARAAHQTS
HHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCC
PHARRATAHMADGETLMDWVLAAYRCLKPGGQVGLILRPADLATLLDALAGRFGAAELLP
CHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHEEE
VHARADAPAVRLLVRAVKGRRTPPAIRPGLILAEADGRTTATADAVLRGEAGLIP
EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA