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The map label for this gene is degS [C]

Identifier: 158422527

GI number: 158422527

Start: 1011675

End: 1012907

Strand: Reverse

Name: degS [C]

Synonym: AZC_0903

Alternate gene names: 158422527

Gene position: 1012907-1011675 (Counterclockwise)

Preceding gene: 158422528

Following gene: 158422526

Centisome position: 18.86

GC content: 67.07

Gene sequence:

>1233_bases
ATGCTGCCGGGGGCCGTCGTGAAAGTGCTGAGCCGCGTCGCCGGAGCCCTTGCGCTCGTGTCCCTGCTCGCGGGTCTGCC
GAAGGCCGCGCGCGCGGAACCCGCCCTCTCCATGGACGAAGTGATCGGCAGGACGCGCGGCTGGACCATCGGCCTCAGCA
CCGGCATGGGGGGCTGCATGGCCACCGCCACCTACGAGGACCGCACGACGGTCTGGATGGGATTCGGCGGCGGCAGCAAC
AAGGCCTTCTTCGCCCTCTCGAACCCCAAATGGCGCTCGCTCGCCGTCGGCAATCGCTACGAGCTGCAACTGCTCGCCCG
CGGCGAAGGCCGCTGGCGGGGCCGCTTCACCGGCGTGGAACTGGACAAGGAGATGGGCCTGCTGGCGCAGGATCTCGTCA
CCGGCTTCGTCATCGACATCGCGCGGGCCGGCGCGCTCGATGTGGTCTATGACCGCAAGATCATCGCCCAGCTCTCCCTT
TCCGGCTCCATGGCAGCCATCGATGCGCTGGTGGATTGCCAGAAGAGCGTCATCGCCAGCCTGCGCACCGAGCCGAAGGC
CGGCGACGGCGCCCGCACCAAGGCGCGGGGCGAGGGGCCGCAATCGGAAGGCGGCAAGAGTTCCGGCACCGGCTTCTTCG
TCTCGGAACGCGGCCATCTGCTCACCAACAATCATGTGGTGAACGGCTGCAAGAAGGTGACCGTGACGCCGGTGGGCGAG
GTGGCCGTGCCCGCACAGGTGGTGGCCCGCGATCCCAACAATGATCTCGCTCTGCTCAAGGCCGATCTCACGCCGAAGGA
TGTGCCGGCCCTCAACACCCGCGTGCGGGTGGGAGACGGCGTGTCCGTCTATGGCTTTCCGCTCTCCGGCCTTCTCGCCA
GCAACGGCAATTTCACCATCGGGAATGTGACGGCCACGGCCGGCCTCGCCGACGACACCCGCATGGTCCAGATTTCAGCG
CCGGTGCAGCCCGGCAACAGCGGCGGGCCGGTGATCGACCAGAAGGGCAATATCGTCGGCGTCGTCGTCTCCAAGCTCGA
TGCCCTGGGGGTCGCCTCGGCCATCAAGGATGTGCCGCAGAACGTCAATTTCGCCATCAAGAGCTCCATCGCCCAGAACT
TCCTCGACACCAATGGCATCGAGAGCAAGGCGAAGCTGAAGGACGCGACGCTGGAACCGGCGGCCGTCGCCGACGTGGCC
AAGGGCTTCACGGTCCGCATCGAGTGCGAATAG

Upstream 100 bases:

>100_bases
CAGGGCCCGGTAACCAACGTGGCGAACACGAACCAGGACCCGTTCGCGGGCGGCCCGGCCGCCGCCGGATCGGTGCCCGT
CGCCGATAAGCCTTGACCGC

Downstream 100 bases:

>100_bases
GCCCGGTCCGCCGCTTCCACGCCCCGCCCGTCTTCCCTCGGCGGGGGGCAGTCACTACCTTCCCCTTATGTCGGATGATC
TGATCGCAGCCGCAAAGCGG

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MLPGAVVKVLSRVAGALALVSLLAGLPKAARAEPALSMDEVIGRTRGWTIGLSTGMGGCMATATYEDRTTVWMGFGGGSN
KAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFTGVELDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSL
SGSMAAIDALVDCQKSVIASLRTEPKAGDGARTKARGEGPQSEGGKSSGTGFFVSERGHLLTNNHVVNGCKKVTVTPVGE
VAVPAQVVARDPNNDLALLKADLTPKDVPALNTRVRVGDGVSVYGFPLSGLLASNGNFTIGNVTATAGLADDTRMVQISA
PVQPGNSGGPVIDQKGNIVGVVVSKLDALGVASAIKDVPQNVNFAIKSSIAQNFLDTNGIESKAKLKDATLEPAAVADVA
KGFTVRIECE

Sequences:

>Translated_410_residues
MLPGAVVKVLSRVAGALALVSLLAGLPKAARAEPALSMDEVIGRTRGWTIGLSTGMGGCMATATYEDRTTVWMGFGGGSN
KAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFTGVELDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSL
SGSMAAIDALVDCQKSVIASLRTEPKAGDGARTKARGEGPQSEGGKSSGTGFFVSERGHLLTNNHVVNGCKKVTVTPVGE
VAVPAQVVARDPNNDLALLKADLTPKDVPALNTRVRVGDGVSVYGFPLSGLLASNGNFTIGNVTATAGLADDTRMVQISA
PVQPGNSGGPVIDQKGNIVGVVVSKLDALGVASAIKDVPQNVNFAIKSSIAQNFLDTNGIESKAKLKDATLEPAAVADVA
KGFTVRIECE
>Mature_410_residues
MLPGAVVKVLSRVAGALALVSLLAGLPKAARAEPALSMDEVIGRTRGWTIGLSTGMGGCMATATYEDRTTVWMGFGGGSN
KAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFTGVELDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSL
SGSMAAIDALVDCQKSVIASLRTEPKAGDGARTKARGEGPQSEGGKSSGTGFFVSERGHLLTNNHVVNGCKKVTVTPVGE
VAVPAQVVARDPNNDLALLKADLTPKDVPALNTRVRVGDGVSVYGFPLSGLLASNGNFTIGNVTATAGLADDTRMVQISA
PVQPGNSGGPVIDQKGNIVGVVVSKLDALGVASAIKDVPQNVNFAIKSSIAQNFLDTNGIESKAKLKDATLEPAAVADVA
KGFTVRIECE

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S1B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 42612; Mature: 42612

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGAVVKVLSRVAGALALVSLLAGLPKAARAEPALSMDEVIGRTRGWTIGLSTGMGGCM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCEE
ATATYEDRTTVWMGFGGGSNKAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFTGVE
EEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECEE
LDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSLSGSMAAIDALVDCQKSVIAS
ECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
LRTEPKAGDGARTKARGEGPQSEGGKSSGTGFFVSERGHLLTNNHVVNGCKKVTVTPVGE
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCEEECCCEEEEEECCCC
VAVPAQVVARDPNNDLALLKADLTPKDVPALNTRVRVGDGVSVYGFPLSGLLASNGNFTI
CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCEEECCCCEEE
GNVTATAGLADDTRMVQISAPVQPGNSGGPVIDQKGNIVGVVVSKLDALGVASAIKDVPQ
EEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHCCC
NVNFAIKSSIAQNFLDTNGIESKAKLKDATLEPAAVADVAKGFTVRIECE
CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MLPGAVVKVLSRVAGALALVSLLAGLPKAARAEPALSMDEVIGRTRGWTIGLSTGMGGCM
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCEE
ATATYEDRTTVWMGFGGGSNKAFFALSNPKWRSLAVGNRYELQLLARGEGRWRGRFTGVE
EEEEECCCEEEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEECEE
LDKEMGLLAQDLVTGFVIDIARAGALDVVYDRKIIAQLSLSGSMAAIDALVDCQKSVIAS
ECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
LRTEPKAGDGARTKARGEGPQSEGGKSSGTGFFVSERGHLLTNNHVVNGCKKVTVTPVGE
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCEEECCCEEEEEECCCC
VAVPAQVVARDPNNDLALLKADLTPKDVPALNTRVRVGDGVSVYGFPLSGLLASNGNFTI
CCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEEECCCCCEEECCCCEEE
GNVTATAGLADDTRMVQISAPVQPGNSGGPVIDQKGNIVGVVVSKLDALGVASAIKDVPQ
EEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHCCC
NVNFAIKSSIAQNFLDTNGIESKAKLKDATLEPAAVADVAKGFTVRIECE
CCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]