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The map label for this gene is nusG [H]

Identifier: 158422506

GI number: 158422506

Start: 984060

End: 984602

Strand: Direct

Name: nusG [H]

Synonym: AZC_0882

Alternate gene names: 158422506

Gene position: 984060-984602 (Clockwise)

Preceding gene: 158422505

Following gene: 158422507

Centisome position: 18.33

GC content: 62.62

Gene sequence:

>543_bases
TTGAGAGGCGCCATGGCTAAGCGTTGGTACATCGTCCACGCCTATTCCAACTTCGAGAAGAAGGTGGCGGACTCAATTCG
CGAGCAGGCGGAGCAGCGCAACCTCACCGACCTGTTCGAGCAGATCCTCGTGCCCACCGAGAAGGTGGTCGAGGTGCGTC
GCGGCCGGAAGGTCGATACCGAGCGCAAGTTCTTCCCCGGCTACGTGCTGGTGAAGATGGACCTCACCGACGAGGCCTTC
CATCTCATCAAGAACACGCCGAAGGTCACCGGCTTCCTGGGCGCCGACAACAAGCCCATGCCGATTTCCGAGAACGAGGC
CATGCGCATCCTGCAGCAGGTGCAGGAAGGCATCGAGCGGCCGAAGCCCTCCATCAGCTACGAGGTGGGCGAGACGGTGA
AGGTGTCCGACGGTCCCTTCGCCACCTTCAACGGCATCGTCGAGGAAGTGGACGAGTCCCGTTCGCGCCTCAAGGTGGCG
GTGTCCATCTTCGGCCGCGCGACCCCGGTCGAGCTCGAATTCGGGCAGGTCGAGAAGGTCTGA

Upstream 100 bases:

>100_bases
CCGCCATGGTCTTCGTCATGGTGCTGCTGGCGTCCATCTTCTTCCTGGTCGTGGACCAGATCCTGCGATTCGGCGTCAGC
CAGATCCTCAGCATCGGCCA

Downstream 100 bases:

>100_bases
TCTCCAGTTTTCGCATGACGCGCGCCGCCGGGCTTGTCCCGTGCGGCGCGATGCTGTATGCGGTGCGCCCTTCGCGGGTT
GGCGGTGCCGACTTGCGGAG

Product: transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRGAMAKRWYIVHAYSNFEKKVADSIREQAEQRNLTDLFEQILVPTEKVVEVRRGRKVDTERKFFPGYVLVKMDLTDEAF
HLIKNTPKVTGFLGADNKPMPISENEAMRILQQVQEGIERPKPSISYEVGETVKVSDGPFATFNGIVEEVDESRSRLKVA
VSIFGRATPVELEFGQVEKV

Sequences:

>Translated_180_residues
MRGAMAKRWYIVHAYSNFEKKVADSIREQAEQRNLTDLFEQILVPTEKVVEVRRGRKVDTERKFFPGYVLVKMDLTDEAF
HLIKNTPKVTGFLGADNKPMPISENEAMRILQQVQEGIERPKPSISYEVGETVKVSDGPFATFNGIVEEVDESRSRLKVA
VSIFGRATPVELEFGQVEKV
>Mature_180_residues
MRGAMAKRWYIVHAYSNFEKKVADSIREQAEQRNLTDLFEQILVPTEKVVEVRRGRKVDTERKFFPGYVLVKMDLTDEAF
HLIKNTPKVTGFLGADNKPMPISENEAMRILQQVQEGIERPKPSISYEVGETVKVSDGPFATFNGIVEEVDESRSRLKVA
VSIFGRATPVELEFGQVEKV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=180, Percent_Identity=54.4444444444444, Blast_Score=209, Evalue=1e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20491; Mature: 20491

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAMAKRWYIVHAYSNFEKKVADSIREQAEQRNLTDLFEQILVPTEKVVEVRRGRKVDT
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC
ERKFFPGYVLVKMDLTDEAFHLIKNTPKVTGFLGADNKPMPISENEAMRILQQVQEGIER
CCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
PKPSISYEVGETVKVSDGPFATFNGIVEEVDESRSRLKVAVSIFGRATPVELEFGQVEKV
CCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRGAMAKRWYIVHAYSNFEKKVADSIREQAEQRNLTDLFEQILVPTEKVVEVRRGRKVDT
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCC
ERKFFPGYVLVKMDLTDEAFHLIKNTPKVTGFLGADNKPMPISENEAMRILQQVQEGIER
CCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC
PKPSISYEVGETVKVSDGPFATFNGIVEEVDESRSRLKVAVSIFGRATPVELEFGQVEKV
CCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]