| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422476
Identifier: 158422476
GI number: 158422476
Start: 957771
End: 958568
Strand: Direct
Name: 158422476
Synonym: AZC_0852
Alternate gene names: NA
Gene position: 957771-958568 (Clockwise)
Preceding gene: 158422475
Following gene: 158422477
Centisome position: 17.84
GC content: 72.43
Gene sequence:
>798_bases ATGGCCGACCCGTCCATCATCGACGAGGTGCGCCGCCGTGCGCAGGCGGCTGGCCTGCCGCCGGGCGTCGTCGAGGCGAT CGTCGCGCAGGAGAGCGGCTTCAACCCCACAACCCGGCCGATCGGCAAGGACGGGCGCCCGCTGTCTTCGGCCACGGGCC TGTTCCAGATGCTGGACAGCGACCGGAAGCAGTACGGCCTGCCTGCCAACGCACCCATCTCCCAGCAGATCGACGCCGGC ATTCGGAAGACGCAGGACAACTGGAACGTCGCACGCGGCGCGCTGGGGCGCGACCCCACGCCGGCCGAGCTCTATGCGGT CCATTACCAGGGCGTCGGCGCCGGGCCTGCGCTGCTGCGCGCCGACCCGAACGCTGGGTTCCGCGACACGCTGAACGCCT ATCGGGCGGGCTGGGGCGACAAGGTGGTTAGCGCCAATCCGTGGCTGGGCCAGATCAACACGGTGGGCGATTTTCTGAAT TGGTCGGCCGGCAAGATCAATCCGAAGGTCGCGCAGTATGGCGGGCCGGCGCCGGGCGGCCCGCCAGCAGCCCAGACCGC CGCCGTGCCGCCGCAGGCCCCATCTCAGGCGGCCTTGGCCGCTCCCGGCAGCGCGCCGGCCGCAGACCCCGCCGCCACGG CCCTCAGCTCGCTTGCAAGCCTTCAGCGCGTGTTCGGCTCGCTCGCGCCCCAGCAGCAGCCCGCGCCCGCGCCGATGCAG GCCCAGCGCCCGCAGATCGACCTCCAGCGCGTCGCCGCCGCGATCCAGGCGGCCCAGCAGCCGCTTTCCAACCTCTGA
Upstream 100 bases:
>100_bases TCGTCTCGCCCGTAATCAACATGATGACGTTATTCGACTCCGTAGAAGAGTCTAGGACGTCCGCGAATTTCTCGACCGCC CAACATCGCAGGAACATGCC
Downstream 100 bases:
>100_bases GGACGCCATGGGCTTCTGGAAATGGTCCAAGACCCCCGCCGCTAACGCTGCCATTGATCCGCCCATCAACTGGGCGGAGG GGCAGCTCGCCAGCACGGTA
Product: lytic transglycolase
Products: NA
Alternate protein names: Phage-Like Protein; Lytic Transglycosylase
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MADPSIIDEVRRRAQAAGLPPGVVEAIVAQESGFNPTTRPIGKDGRPLSSATGLFQMLDSDRKQYGLPANAPISQQIDAG IRKTQDNWNVARGALGRDPTPAELYAVHYQGVGAGPALLRADPNAGFRDTLNAYRAGWGDKVVSANPWLGQINTVGDFLN WSAGKINPKVAQYGGPAPGGPPAAQTAAVPPQAPSQAALAAPGSAPAADPAATALSSLASLQRVFGSLAPQQQPAPAPMQ AQRPQIDLQRVAAAIQAAQQPLSNL
Sequences:
>Translated_265_residues MADPSIIDEVRRRAQAAGLPPGVVEAIVAQESGFNPTTRPIGKDGRPLSSATGLFQMLDSDRKQYGLPANAPISQQIDAG IRKTQDNWNVARGALGRDPTPAELYAVHYQGVGAGPALLRADPNAGFRDTLNAYRAGWGDKVVSANPWLGQINTVGDFLN WSAGKINPKVAQYGGPAPGGPPAAQTAAVPPQAPSQAALAAPGSAPAADPAATALSSLASLQRVFGSLAPQQQPAPAPMQ AQRPQIDLQRVAAAIQAAQQPLSNL >Mature_264_residues ADPSIIDEVRRRAQAAGLPPGVVEAIVAQESGFNPTTRPIGKDGRPLSSATGLFQMLDSDRKQYGLPANAPISQQIDAGI RKTQDNWNVARGALGRDPTPAELYAVHYQGVGAGPALLRADPNAGFRDTLNAYRAGWGDKVVSANPWLGQINTVGDFLNW SAGKINPKVAQYGGPAPGGPPAAQTAAVPPQAPSQAALAAPGSAPAADPAATALSSLASLQRVFGSLAPQQQPAPAPMQA QRPQIDLQRVAAAIQAAQQPLSNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27350; Mature: 27219
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPSIIDEVRRRAQAAGLPPGVVEAIVAQESGFNPTTRPIGKDGRPLSSATGLFQMLDS CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DRKQYGLPANAPISQQIDAGIRKTQDNWNVARGALGRDPTPAELYAVHYQGVGAGPALLR HHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHEEEEEECCCCCCCEEEE ADPNAGFRDTLNAYRAGWGDKVVSANPWLGQINTVGDFLNWSAGKINPKVAQYGGPAPGG CCCCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCC PPAAQTAAVPPQAPSQAALAAPGSAPAADPAATALSSLASLQRVFGSLAPQQQPAPAPMQ CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AQRPQIDLQRVAAAIQAAQQPLSNL CCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADPSIIDEVRRRAQAAGLPPGVVEAIVAQESGFNPTTRPIGKDGRPLSSATGLFQMLDS CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH DRKQYGLPANAPISQQIDAGIRKTQDNWNVARGALGRDPTPAELYAVHYQGVGAGPALLR HHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHEEEEEECCCCCCCEEEE ADPNAGFRDTLNAYRAGWGDKVVSANPWLGQINTVGDFLNWSAGKINPKVAQYGGPAPGG CCCCCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCC PPAAQTAAVPPQAPSQAALAAPGSAPAADPAATALSSLASLQRVFGSLAPQQQPAPAPMQ CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AQRPQIDLQRVAAAIQAAQQPLSNL CCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA