Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is 158422462

Identifier: 158422462

GI number: 158422462

Start: 943583

End: 944194

Strand: Direct

Name: 158422462

Synonym: AZC_0838

Alternate gene names: NA

Gene position: 943583-944194 (Clockwise)

Preceding gene: 158422461

Following gene: 158422463

Centisome position: 17.57

GC content: 66.83

Gene sequence:

>612_bases
ATGTACCCGGAGACGGGCGCGCTGCGGCGGCAGCTCTATCCGAAGCACATGGCGTTCTTTCGGGCCGGCGTCGAGCACCA
AGAACGGTGCATGATGGCCGCGAACCGCGTGGGCAAGACATACGGCGTCGGCGGCTACGAGACGGTGCTGCACCTGACCG
GCCGATACCCGGACTGGTGGGAGGGGCGGCGCTTCGATCATCCGATCGAGGCATGGGCGGCCGGCGACACGGGCGAGACG
ACGCGCGACATCGTGCAGTCGGTGCTGTTTGGGAAAATCGACGATCTGGGCACAGGCCTCATCCCGGCGGACGACATCGT
GGGCGAGCCCAGCCGTCGGGCGGGCATCACCGGCGCCATCGACACGGCGGCCATCCGCCACCGTTCCGGCGGGACAAGCC
TGATCGGCTTCAAGAGCTATGACCAGGGGCGCAAGAAATTCCAGGGCACGGCGAAGCACGTGGTGTGGCTGGACGAAGAG
CCGCCGGCCGACGTCTATCAGGAAGCCCTCATGCGCCTCATGACCACCAGCGGCCTGATGCTCTGCACGTTCACGCCCCT
TGAGGGCATGACGGACATCGCCGCCCAGTTCATCGCGGCGATCGGTGTCTAG

Upstream 100 bases:

>100_bases
CTCGCAGCCGCCCTTGAACTCGAGATCGGAGGCGAAGGCGGAGCTGGCGAAGCTGCTGGCAGAGAAGCAGCGCCGGGCCG
AACGCACTAAGCTGCTGCGG

Downstream 100 bases:

>100_bases
GTTCTGCATCCAGGCGACGTGGGATGATGTCCCGCACCTGACGCAGCAGCAGAAGGACGAGCTTTGGGCCGCAATCCCGG
CCCACATGCGGGACGCGCGC

Product: DNA packaging protein GP3

Products: NA

Alternate protein names: Phage DNA Packaging

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MYPETGALRRQLYPKHMAFFRAGVEHQERCMMAANRVGKTYGVGGYETVLHLTGRYPDWWEGRRFDHPIEAWAAGDTGET
TRDIVQSVLFGKIDDLGTGLIPADDIVGEPSRRAGITGAIDTAAIRHRSGGTSLIGFKSYDQGRKKFQGTAKHVVWLDEE
PPADVYQEALMRLMTTSGLMLCTFTPLEGMTDIAAQFIAAIGV

Sequences:

>Translated_203_residues
MYPETGALRRQLYPKHMAFFRAGVEHQERCMMAANRVGKTYGVGGYETVLHLTGRYPDWWEGRRFDHPIEAWAAGDTGET
TRDIVQSVLFGKIDDLGTGLIPADDIVGEPSRRAGITGAIDTAAIRHRSGGTSLIGFKSYDQGRKKFQGTAKHVVWLDEE
PPADVYQEALMRLMTTSGLMLCTFTPLEGMTDIAAQFIAAIGV
>Mature_203_residues
MYPETGALRRQLYPKHMAFFRAGVEHQERCMMAANRVGKTYGVGGYETVLHLTGRYPDWWEGRRFDHPIEAWAAGDTGET
TRDIVQSVLFGKIDDLGTGLIPADDIVGEPSRRAGITGAIDTAAIRHRSGGTSLIGFKSYDQGRKKFQGTAKHVVWLDEE
PPADVYQEALMRLMTTSGLMLCTFTPLEGMTDIAAQFIAAIGV

Specific function: Unknown

COG id: COG5565

COG function: function code R; Bacteriophage terminase large (ATPase) subunit and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22397; Mature: 22397

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPETGALRRQLYPKHMAFFRAGVEHQERCMMAANRVGKTYGVGGYETVLHLTGRYPDWW
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCC
EGRRFDHPIEAWAAGDTGETTRDIVQSVLFGKIDDLGTGLIPADDIVGEPSRRAGITGAI
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCHHCCCCCCH
DTAAIRHRSGGTSLIGFKSYDQGRKKFQGTAKHVVWLDEEPPADVYQEALMRLMTTSGLM
HHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEE
LCTFTPLEGMTDIAAQFIAAIGV
EEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MYPETGALRRQLYPKHMAFFRAGVEHQERCMMAANRVGKTYGVGGYETVLHLTGRYPDWW
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCCC
EGRRFDHPIEAWAAGDTGETTRDIVQSVLFGKIDDLGTGLIPADDIVGEPSRRAGITGAI
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCHHCCCCCCH
DTAAIRHRSGGTSLIGFKSYDQGRKKFQGTAKHVVWLDEEPPADVYQEALMRLMTTSGLM
HHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEE
LCTFTPLEGMTDIAAQFIAAIGV
EEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA