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The map label for this gene is dppC [H]

Identifier: 158422398

GI number: 158422398

Start: 875615

End: 876505

Strand: Reverse

Name: dppC [H]

Synonym: AZC_0774

Alternate gene names: 158422398

Gene position: 876505-875615 (Counterclockwise)

Preceding gene: 158422399

Following gene: 158422397

Centisome position: 16.32

GC content: 69.14

Gene sequence:

>891_bases
ATGAGCACCTTGTCCTCCTCCCCCGCCCCCACCGTCGCGGTGCCGCGCGAGCGCACGCCCTTCGAGGAGGCCATGCGCCG
CCTCGTGCGCCGGCGCGGCGCCATGATCGGCCTCGCCGTGGTGCTGTTCTTCATCATCATCGCGGTGTTCGCGCCCTATA
TCGCGCCCTATGACCCGACCGCCACGAGCTGGCTTGCCGTGCGCAAGCCGCCCACATGGGAGCATCCCTTCGGCACCGAC
GAGGTGGGCCGCGATGTGCTCTCCCGCGTCATCTTCGGCGCCCGCGCCTCGCTCTCCGCCGGGCTCGTCTCGGTGGCCCT
CGCGGTCGCCATCGGCCTGCCGGTGGGCATGATTGCGGGCTATGCCGGCGGCTGGATCGAGGCGGCTCTGATGCGCCTCA
CCGATGCGCTGCTCGCCATACCCTTCCTTATCCTCGCCATCGCGCTCGCTGCCTTCCTCGGCCCGACGCTGACCAATGCG
ATGATCGCCATCGGGCTGTCCGCCACCACCATCTTCATCCGCCTCACGCGGGCGCAGGTGCAGTCCACCAAGGTGGAAGA
GTATGTGGAAGCCGCGCGCGCGGCCGGCGCGACGCCGCTGCGCATCGTGCTGCGGCACATCCTGCCCAACATCATCCCCG
CCATCCTCGTTCAGGCGACGCTCACCATTGCTGCCGCCATCATCGCGGAGGCGAGCCTGTCCTTCCTCGGGCTCGGGCAG
CAGCCGCCCGATCCCTCCTGGGGCTCCATGCTGAACACAGCGAAGAACTTCCTCACGCAGGCGCCCTGGATGGCCATCTG
GCCGGGCCTGTCCATCTTCCTCGCCGTGCTCTCCTTCAACCTGCTGGGCGATGGTCTGCGCGATGCGCTCGACCCGCGCC
ACCGCAACTGA

Upstream 100 bases:

>100_bases
TGGTGCAGGGCGTCGTGCTGTGCACGGCCACCACCTACATCCTGCTGAACCTGCTGGCCGATCTCGCCTATTTCCTCGTC
AATCCGAAGCTGCGGCGGTC

Downstream 100 bases:

>100_bases
GGAGGGGCCGATGAGAACACGAATCGGGCTCCCCATGACCCACACCGCCCCAAAGTCCTCCCCCGTTGCGGGCGAGGGTT
GGGAGGGGGGTACAACGGGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSTLSSSPAPTVAVPRERTPFEEAMRRLVRRRGAMIGLAVVLFFIIIAVFAPYIAPYDPTATSWLAVRKPPTWEHPFGTD
EVGRDVLSRVIFGARASLSAGLVSVALAVAIGLPVGMIAGYAGGWIEAALMRLTDALLAIPFLILAIALAAFLGPTLTNA
MIAIGLSATTIFIRLTRAQVQSTKVEEYVEAARAAGATPLRIVLRHILPNIIPAILVQATLTIAAAIIAEASLSFLGLGQ
QPPDPSWGSMLNTAKNFLTQAPWMAIWPGLSIFLAVLSFNLLGDGLRDALDPRHRN

Sequences:

>Translated_296_residues
MSTLSSSPAPTVAVPRERTPFEEAMRRLVRRRGAMIGLAVVLFFIIIAVFAPYIAPYDPTATSWLAVRKPPTWEHPFGTD
EVGRDVLSRVIFGARASLSAGLVSVALAVAIGLPVGMIAGYAGGWIEAALMRLTDALLAIPFLILAIALAAFLGPTLTNA
MIAIGLSATTIFIRLTRAQVQSTKVEEYVEAARAAGATPLRIVLRHILPNIIPAILVQATLTIAAAIIAEASLSFLGLGQ
QPPDPSWGSMLNTAKNFLTQAPWMAIWPGLSIFLAVLSFNLLGDGLRDALDPRHRN
>Mature_295_residues
STLSSSPAPTVAVPRERTPFEEAMRRLVRRRGAMIGLAVVLFFIIIAVFAPYIAPYDPTATSWLAVRKPPTWEHPFGTDE
VGRDVLSRVIFGARASLSAGLVSVALAVAIGLPVGMIAGYAGGWIEAALMRLTDALLAIPFLILAIALAAFLGPTLTNAM
IAIGLSATTIFIRLTRAQVQSTKVEEYVEAARAAGATPLRIVLRHILPNIIPAILVQATLTIAAAIIAEASLSFLGLGQQ
PPDPSWGSMLNTAKNFLTQAPWMAIWPGLSIFLAVLSFNLLGDGLRDALDPRHRN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=285, Percent_Identity=45.2631578947368, Blast_Score=250, Evalue=9e-68,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=42.9133858267717, Blast_Score=217, Evalue=8e-58,
Organism=Escherichia coli, GI1789964, Length=302, Percent_Identity=43.3774834437086, Blast_Score=210, Evalue=8e-56,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=36.7857142857143, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789889, Length=238, Percent_Identity=39.4957983193277, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787549, Length=290, Percent_Identity=36.551724137931, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=33.7719298245614, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31581; Mature: 31449

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLSSSPAPTVAVPRERTPFEEAMRRLVRRRGAMIGLAVVLFFIIIAVFAPYIAPYDPT
CCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ATSWLAVRKPPTWEHPFGTDEVGRDVLSRVIFGARASLSAGLVSVALAVAIGLPVGMIAG
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGGWIEAALMRLTDALLAIPFLILAIALAAFLGPTLTNAMIAIGLSATTIFIRLTRAQV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTKVEEYVEAARAAGATPLRIVLRHILPNIIPAILVQATLTIAAAIIAEASLSFLGLGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPPDPSWGSMLNTAKNFLTQAPWMAIWPGLSIFLAVLSFNLLGDGLRDALDPRHRN
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STLSSSPAPTVAVPRERTPFEEAMRRLVRRRGAMIGLAVVLFFIIIAVFAPYIAPYDPT
CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCC
ATSWLAVRKPPTWEHPFGTDEVGRDVLSRVIFGARASLSAGLVSVALAVAIGLPVGMIAG
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGGWIEAALMRLTDALLAIPFLILAIALAAFLGPTLTNAMIAIGLSATTIFIRLTRAQV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTKVEEYVEAARAAGATPLRIVLRHILPNIIPAILVQATLTIAAAIIAEASLSFLGLGQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QPPDPSWGSMLNTAKNFLTQAPWMAIWPGLSIFLAVLSFNLLGDGLRDALDPRHRN
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]