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The map label for this gene is yecS [C]

Identifier: 158422352

GI number: 158422352

Start: 818437

End: 820053

Strand: Direct

Name: yecS [C]

Synonym: AZC_0728

Alternate gene names: 158422352

Gene position: 818437-820053 (Clockwise)

Preceding gene: 158422351

Following gene: 158422354

Centisome position: 15.24

GC content: 71.37

Gene sequence:

>1617_bases
TTGCGGATGAACCCCATGCGTGCGGTCCTTGCGGCCTTGGCCCTGGCAGTGCTTGCGCTGCCGGCCGGCGGGATGATGGC
GGCGGCTCCGGCCCGCGCCCAGAGCATCTCCTCCCTCACCGACTATCTCACCCGCGACACCACGGCGAAGGCGCCGCCGC
CGGCGCTGACCGCGCCACCGCCCGTCCTGCGCTATGGCGCCGACGTGGGCCGGGGCGCGCCCTATATTTTTCGCGATCCG
GCGGCGCCGGCGCGCATCGTGGGCTTCGAGGTGGACCTGATGGCGCAACTGGGCGCGCGTCTCAGTCGCCTGCCGGTGCT
GGTGCAGAGCGAGGCCGAGACCCTGCGGCCGAGCCTCGTCTCCGGCCTCTACGAACTGGCGGTCGGGGGCCTCGACGTGG
CGGCGCCGGGGCAGGCCGGCGTCGAGTTCACCATTCCCTATTACGCGACCTTCGGGCAGATCGTGATCCGCCGGGACCAG
CCGGCCATCAACCGGATCGACGCGCTCAAGGGCATGACCATCGGCGTGCTGAAGGGCAGCCGCCTGCGCGACACGCTGGC
GGCCGTGCCGGATGTGGTGCTGCGGGTCTTCGACACCGCGCCGGAGGCCTATGCGGCGCTGAAGGCGGGGAGCCTCGAAG
CCGTGGTGACGGACTATCCGGTCGCCCTCTACCACGCCCAGCATGACCCAGCGGTGATGTTCACCGGCCCGCCGGTGGGG
CGCATCGAATACGGCCTGGCGCTGAAGGCGGGCGCGCAGCCCGCCCTGCTCGGTGCCCTCAACACCGCCATCTACGCCAT
GTCCCGCGACGGGACGCTGCGCGAATTGCTGGACCGCTGGGAATTGTGGACGCCGGTGATGGCGCAGGAGACCGGCGACA
CGCGCCCGCTCCAGGCCCAGCCCACGGCCCGCGAATATGTGCTGGCGCTCACCATGCCCGACGGCATCGTGCCGCGTCTC
GAGCGCTATGTGCGCTTCCTGCCCCAGTTCGTGCGCGCGGCGCTGACGACGCTGGAGGTGGCGGTGCTCGGCCTGCTGCT
GGCCCTCGCGGCCGGCGCCCTGCTGGCGGTGCTGCACGCACGGGGCGGCCGTCTGCTGCGCGGGGCGACGGGCGCCTATG
TGGACGTGATCGGCGGCACGCCGCTTCTCGTGCTGCTGCTGTTCGTCTGTTACGGCCTGCCCGAGGCGGGGCTGCCCATC
GGCCCCTTCCTCGCCGGCGTCCTGGCGCTCGGCCTGCATCATGCGGCGGGCATGGCGGAAGCCTATCGCACGCGGCTTGC
GGTGGTGACCCGCACGCAGATGGAGGCGGCGGTCTCGCTGAACATGTCGAGGGGGCAGGCATTCAAGGCGGTGGTGCTGC
CGCAGGCGGTCCGCGCGCTTCTGCCCTCGACCGCGCGGGGCTTCGTGCTGGTGCTGAAGGATTCCTCCCTCGTCAGCGTC
ATCCTGCTCGCCGATCTCACCCGCACCTATGAGAGCGTCGCTTCGGTTCACCAGGACTTTCTCGGCATCGGCCTGCTGGT
GGCGGCGATCTATCTGGTGCTCGGTCTGCCCTTCGCGCGGCTTGCTGCCTGGGCGGAGCGGGTGGCGGAGGAGACATTGC
CGCCGGTACGCGGCTGA

Upstream 100 bases:

>100_bases
GACCGCGCCGGGCGATGCCATGTTCCGCGCGCCGCAGGATGTCCGCGTGCAGCGCTTTTTCCAGCTCTTCGCCTGAGCGG
CTGGCTGGTCCCTTTCCTCT

Downstream 100 bases:

>100_bases
ACGGACGCAAAAAAAACGCGCGGCAGGCGACTGCCGCGCGTCTGGTGAAGGGTCCGAAAGGGCTCAGGCCGCGTCGCGGA
TGAGCTTGCGCAGGATCGCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MRMNPMRAVLAALALAVLALPAGGMMAAAPARAQSISSLTDYLTRDTTAKAPPPALTAPPPVLRYGADVGRGAPYIFRDP
AAPARIVGFEVDLMAQLGARLSRLPVLVQSEAETLRPSLVSGLYELAVGGLDVAAPGQAGVEFTIPYYATFGQIVIRRDQ
PAINRIDALKGMTIGVLKGSRLRDTLAAVPDVVLRVFDTAPEAYAALKAGSLEAVVTDYPVALYHAQHDPAVMFTGPPVG
RIEYGLALKAGAQPALLGALNTAIYAMSRDGTLRELLDRWELWTPVMAQETGDTRPLQAQPTAREYVLALTMPDGIVPRL
ERYVRFLPQFVRAALTTLEVAVLGLLLALAAGALLAVLHARGGRLLRGATGAYVDVIGGTPLLVLLLFVCYGLPEAGLPI
GPFLAGVLALGLHHAAGMAEAYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSV
ILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAERVAEETLPPVRG

Sequences:

>Translated_538_residues
MRMNPMRAVLAALALAVLALPAGGMMAAAPARAQSISSLTDYLTRDTTAKAPPPALTAPPPVLRYGADVGRGAPYIFRDP
AAPARIVGFEVDLMAQLGARLSRLPVLVQSEAETLRPSLVSGLYELAVGGLDVAAPGQAGVEFTIPYYATFGQIVIRRDQ
PAINRIDALKGMTIGVLKGSRLRDTLAAVPDVVLRVFDTAPEAYAALKAGSLEAVVTDYPVALYHAQHDPAVMFTGPPVG
RIEYGLALKAGAQPALLGALNTAIYAMSRDGTLRELLDRWELWTPVMAQETGDTRPLQAQPTAREYVLALTMPDGIVPRL
ERYVRFLPQFVRAALTTLEVAVLGLLLALAAGALLAVLHARGGRLLRGATGAYVDVIGGTPLLVLLLFVCYGLPEAGLPI
GPFLAGVLALGLHHAAGMAEAYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSV
ILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAERVAEETLPPVRG
>Mature_538_residues
MRMNPMRAVLAALALAVLALPAGGMMAAAPARAQSISSLTDYLTRDTTAKAPPPALTAPPPVLRYGADVGRGAPYIFRDP
AAPARIVGFEVDLMAQLGARLSRLPVLVQSEAETLRPSLVSGLYELAVGGLDVAAPGQAGVEFTIPYYATFGQIVIRRDQ
PAINRIDALKGMTIGVLKGSRLRDTLAAVPDVVLRVFDTAPEAYAALKAGSLEAVVTDYPVALYHAQHDPAVMFTGPPVG
RIEYGLALKAGAQPALLGALNTAIYAMSRDGTLRELLDRWELWTPVMAQETGDTRPLQAQPTAREYVLALTMPDGIVPRL
ERYVRFLPQFVRAALTTLEVAVLGLLLALAAGALLAVLHARGGRLLRGATGAYVDVIGGTPLLVLLLFVCYGLPEAGLPI
GPFLAGVLALGLHHAAGMAEAYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSV
ILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAERVAEETLPPVRG

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=189, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787030, Length=192, Percent_Identity=32.2916666666667, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788228, Length=210, Percent_Identity=28.0952380952381, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=29.6296296296296, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787085, Length=209, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788646, Length=195, Percent_Identity=28.7179487179487, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787088, Length=210, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786873, Length=209, Percent_Identity=26.7942583732057, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786874, Length=164, Percent_Identity=27.4390243902439, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 56900; Mature: 56900

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1 ; PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNPMRAVLAALALAVLALPAGGMMAAAPARAQSISSLTDYLTRDTTAKAPPPALTAPP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PVLRYGADVGRGAPYIFRDPAAPARIVGFEVDLMAQLGARLSRLPVLVQSEAETLRPSLV
CHHHCCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH
SGLYELAVGGLDVAAPGQAGVEFTIPYYATFGQIVIRRDQPAINRIDALKGMTIGVLKGS
HHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCEEEEECCCCHHHHHHHHCCCEEEEECCC
RLRDTLAAVPDVVLRVFDTAPEAYAALKAGSLEAVVTDYPVALYHAQHDPAVMFTGPPVG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCEEEEECCCCCEEEECCCCCC
RIEYGLALKAGAQPALLGALNTAIYAMSRDGTLRELLDRWELWTPVMAQETGDTRPLQAQ
CEEECEEEECCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
PTAREYVLALTMPDGIVPRLERYVRFLPQFVRAALTTLEVAVLGLLLALAAGALLAVLHA
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGGRLLRGATGAYVDVIGGTPLLVLLLFVCYGLPEAGLPIGPFLAGVLALGLHHAAGMAE
CCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSV
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
ILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAERVAEETLPPVRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRMNPMRAVLAALALAVLALPAGGMMAAAPARAQSISSLTDYLTRDTTAKAPPPALTAPP
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PVLRYGADVGRGAPYIFRDPAAPARIVGFEVDLMAQLGARLSRLPVLVQSEAETLRPSLV
CHHHCCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCEEEECCHHHHHHHHH
SGLYELAVGGLDVAAPGQAGVEFTIPYYATFGQIVIRRDQPAINRIDALKGMTIGVLKGS
HHHHHHHHCCCCCCCCCCCCCEEEECHHHHHCEEEEECCCCHHHHHHHHCCCEEEEECCC
RLRDTLAAVPDVVLRVFDTAPEAYAALKAGSLEAVVTDYPVALYHAQHDPAVMFTGPPVG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCEEEEECCCCCEEEECCCCCC
RIEYGLALKAGAQPALLGALNTAIYAMSRDGTLRELLDRWELWTPVMAQETGDTRPLQAQ
CEEECEEEECCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
PTAREYVLALTMPDGIVPRLERYVRFLPQFVRAALTTLEVAVLGLLLALAAGALLAVLHA
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGGRLLRGATGAYVDVIGGTPLLVLLLFVCYGLPEAGLPIGPFLAGVLALGLHHAAGMAE
CCCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSV
HHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
ILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAERVAEETLPPVRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]