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The map label for this gene is trg [C]

Identifier: 158422348

GI number: 158422348

Start: 810714

End: 812807

Strand: Reverse

Name: trg [C]

Synonym: AZC_0724

Alternate gene names: 158422348

Gene position: 812807-810714 (Counterclockwise)

Preceding gene: 158422349

Following gene: 158422346

Centisome position: 15.14

GC content: 69.72

Gene sequence:

>2094_bases
GTGCGCCTGTCCATCAAGCTCACCCTGCTGGCGCTGTTCGGGCTGGTCAGCCTGATCATGGCCGCGCTCTGCGGCTCTTC
GCTGCTCACCGCCTACAAGCGCGATCTCGCCGCCGCCGAAGCACAGGCCTATGCGGAAATCGACCGCGGGCTGTTCCAGG
CCTTCACCACCCTGCGCACCGAGCGCTCGGACAGCGCCGCCGCGCTCTCCCGCCCACTCGACGCCATGCCGCCGCTGGTG
GCCGGCATCGCCAAGCGCCGGGAGAAGGTGGACGCCGGCTTCGCAGTCGCTCTCACAGAACTGTCCAGCCAGGGGACGCC
GGAGGCGAAGGATCTCGCCGGCCGCGTGGAGGGCATCCGCAAGGCCATCAAGGATCTGCGCGCGGACATCGACCGCGCCC
TCCAGCTGCCGCCCGACAGCCGCGACAAGACGCTGAGCACCCGCATCTATGACGTGACCGTCCGCGAGCTGGATCGGCTC
GACGACGTTTCGCAGGACATCGGCAAGCGCATCCGCAGCCTCGACATCTCGCTGACGCCCTATCTCTCCGTGCGCGGCAC
CACAGGCATCGTGCGCAATTCCGAAGGCAACACCGTTCTTGCCGTCAGCAATGCCCTGCGCAAGGGCGAGCCGCTCGCGC
CGAAGGATCTCACGGAGGTCCAGGCGGAAGAGGTGCGCGGCCAGCTCGGCTGGTCGATGGTCAAGGAAGAGGTCGACAAC
AAGGACATCCCGGCTTCGCTGCGGGAGGCCGTCGCCAAGGCCGACAGTGCCTTCTTCTCCGGCAGCTTCAAGACGCTGAA
GGAAGACACGCTTAAGACCCTGAGCAACGGCGGCAAGCCACCGCTGACGCTCGACCAGTGGCGGAGCGCCGCCGTGCCCG
CGCTGGAAACCATCGGTGCCGTCGCCATTACCGCCATGGACGAGATGGCCGACGCTGCGGGTGCCGCCGCCGGACGCGCC
CGCGCGTCCCTCGCGCTCTATGCCGGGCTGCTGGTGGTGGCCCTCCTGATCGCCGGCGCCGGGCTCGTGGTGGTGATCCG
CCGCGTCACCCGGCCCATCTCCGGCCTCACCGCCACCATGCAGCGCCTCGCCGACGGGGATCTCGCGGTGGACGTGGCCG
GCACCCGACGCCACGACGAAGTGGGCTCCATGGCCAAGGCCGTGCTCGTCTTCAAGGAAGAGATGGCCCGCAACACGGCC
CTGGAAGCCGAGGCCAAGGCCGCCCACGTGCAGGCCGAGGCCGAGCGGCGCGAGGGGATGCTGAAGCTCGCCGCCGAATT
CGAGAGTGCGGTGGGCGGCATCATCGGCAGCGTTGCCTCCGCCTCCACCCAGCTCCACGGCACCGCCCGCACCATGGCGG
AGGCCGCACGCCGCACCTCGGAGAAGTCCACCGCCGTCGCGGCGGCCGCCGAGGAAGCCTCCACCAACGTGGTCATGGTC
GCCTCTTCCGCCGAGGAACTGGGTTCTTCCGTGGATGAGATCGGCCGCCAGGTGCAGCAGTCGGCCGAGATGTCAAGCGT
CGCCGTCGCCGAGGCGCAGAAGACCGGCACGGTCATCCAGGATCTGGCGCAGGCCGCGTCCCGCATCGGCGACGTGGTGG
GGCTCATCTCCTCCATCGCCGAGCAGACCAACCTCCTCGCCCTCAATGCCACCATCGAGGCGGCGCGGGCGGGGGATGCC
GGGAAGGGCTTTGCGGTGGTCGCCTCCGAGGTGAAGGCGCTGGCCACCCAGACCGCCAAGGCGACGGAGGAGATCGAGAG
CCAGATCGGCGCCATCCAGGCCACCACCAAGCAGGCGGTGCAGGTCATCGAAGGCGTCGGCTCGCAGATCCGCAAGATGA
GCGACGTGGCCACCAGCATCTCCGCCGCCGTCGAGGAGCAGGGCGTCGCCACCCGCGAGATCGTCCGCAACGTCGACCAG
GCGGCCACCGGCACCAACAGCGTGACCGCCCACATCTCGGAAGTGGCCCAGACCGCCGACGAGACCGGTTCCGCTGCCGG
CCAGGTGCTCACCGCCGCCGCCGCCCTCACCGATCAGGCCAAGCGCCTCGAAGCGGAAATGCAGCGCTTCCTCGGCACGG
TCCGCACGGCCTGA

Upstream 100 bases:

>100_bases
CCGGCGGTTTGCCGGCAAGACACCACAACCAAAGGTACCCACAAGGTTCGGACAAGGCTCACAGGATAGGGAAGGGTAAC
TGACTTATCAGGGGGCTTCC

Downstream 100 bases:

>100_bases
CCGCACAAGGACCTCCCGGCCGCCGTTCGGCCGGCCGGGGCGTGTTCAGTGGGCGGCCTCGTGGCTCGCCCGCGGCTGGA
GACGCTCGGTGATCCGCCGG

Product: histidine kinase

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MRLSIKLTLLALFGLVSLIMAALCGSSLLTAYKRDLAAAEAQAYAEIDRGLFQAFTTLRTERSDSAAALSRPLDAMPPLV
AGIAKRREKVDAGFAVALTELSSQGTPEAKDLAGRVEGIRKAIKDLRADIDRALQLPPDSRDKTLSTRIYDVTVRELDRL
DDVSQDIGKRIRSLDISLTPYLSVRGTTGIVRNSEGNTVLAVSNALRKGEPLAPKDLTEVQAEEVRGQLGWSMVKEEVDN
KDIPASLREAVAKADSAFFSGSFKTLKEDTLKTLSNGGKPPLTLDQWRSAAVPALETIGAVAITAMDEMADAAGAAAGRA
RASLALYAGLLVVALLIAGAGLVVVIRRVTRPISGLTATMQRLADGDLAVDVAGTRRHDEVGSMAKAVLVFKEEMARNTA
LEAEAKAAHVQAEAERREGMLKLAAEFESAVGGIIGSVASASTQLHGTARTMAEAARRTSEKSTAVAAAAEEASTNVVMV
ASSAEELGSSVDEIGRQVQQSAEMSSVAVAEAQKTGTVIQDLAQAASRIGDVVGLISSIAEQTNLLALNATIEAARAGDA
GKGFAVVASEVKALATQTAKATEEIESQIGAIQATTKQAVQVIEGVGSQIRKMSDVATSISAAVEEQGVATREIVRNVDQ
AATGTNSVTAHISEVAQTADETGSAAGQVLTAAAALTDQAKRLEAEMQRFLGTVRTA

Sequences:

>Translated_697_residues
MRLSIKLTLLALFGLVSLIMAALCGSSLLTAYKRDLAAAEAQAYAEIDRGLFQAFTTLRTERSDSAAALSRPLDAMPPLV
AGIAKRREKVDAGFAVALTELSSQGTPEAKDLAGRVEGIRKAIKDLRADIDRALQLPPDSRDKTLSTRIYDVTVRELDRL
DDVSQDIGKRIRSLDISLTPYLSVRGTTGIVRNSEGNTVLAVSNALRKGEPLAPKDLTEVQAEEVRGQLGWSMVKEEVDN
KDIPASLREAVAKADSAFFSGSFKTLKEDTLKTLSNGGKPPLTLDQWRSAAVPALETIGAVAITAMDEMADAAGAAAGRA
RASLALYAGLLVVALLIAGAGLVVVIRRVTRPISGLTATMQRLADGDLAVDVAGTRRHDEVGSMAKAVLVFKEEMARNTA
LEAEAKAAHVQAEAERREGMLKLAAEFESAVGGIIGSVASASTQLHGTARTMAEAARRTSEKSTAVAAAAEEASTNVVMV
ASSAEELGSSVDEIGRQVQQSAEMSSVAVAEAQKTGTVIQDLAQAASRIGDVVGLISSIAEQTNLLALNATIEAARAGDA
GKGFAVVASEVKALATQTAKATEEIESQIGAIQATTKQAVQVIEGVGSQIRKMSDVATSISAAVEEQGVATREIVRNVDQ
AATGTNSVTAHISEVAQTADETGSAAGQVLTAAAALTDQAKRLEAEMQRFLGTVRTA
>Mature_697_residues
MRLSIKLTLLALFGLVSLIMAALCGSSLLTAYKRDLAAAEAQAYAEIDRGLFQAFTTLRTERSDSAAALSRPLDAMPPLV
AGIAKRREKVDAGFAVALTELSSQGTPEAKDLAGRVEGIRKAIKDLRADIDRALQLPPDSRDKTLSTRIYDVTVRELDRL
DDVSQDIGKRIRSLDISLTPYLSVRGTTGIVRNSEGNTVLAVSNALRKGEPLAPKDLTEVQAEEVRGQLGWSMVKEEVDN
KDIPASLREAVAKADSAFFSGSFKTLKEDTLKTLSNGGKPPLTLDQWRSAAVPALETIGAVAITAMDEMADAAGAAAGRA
RASLALYAGLLVVALLIAGAGLVVVIRRVTRPISGLTATMQRLADGDLAVDVAGTRRHDEVGSMAKAVLVFKEEMARNTA
LEAEAKAAHVQAEAERREGMLKLAAEFESAVGGIIGSVASASTQLHGTARTMAEAARRTSEKSTAVAAAAEEASTNVVMV
ASSAEELGSSVDEIGRQVQQSAEMSSVAVAEAQKTGTVIQDLAQAASRIGDVVGLISSIAEQTNLLALNATIEAARAGDA
GKGFAVVASEVKALATQTAKATEEIESQIGAIQATTKQAVQVIEGVGSQIRKMSDVATSISAAVEEQGVATREIVRNVDQ
AATGTNSVTAHISEVAQTADETGSAAGQVLTAAAALTDQAKRLEAEMQRFLGTVRTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=378, Percent_Identity=25.6613756613757, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI2367378, Length=327, Percent_Identity=25.9938837920489, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788194, Length=279, Percent_Identity=28.673835125448, Blast_Score=94, Evalue=4e-20,
Organism=Escherichia coli, GI1788195, Length=187, Percent_Identity=31.5508021390374, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789453, Length=146, Percent_Identity=39.7260273972603, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 72780; Mature: 72780

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSIKLTLLALFGLVSLIMAALCGSSLLTAYKRDLAAAEAQAYAEIDRGLFQAFTTLRT
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSDSAAALSRPLDAMPPLVAGIAKRREKVDAGFAVALTELSSQGTPEAKDLAGRVEGIR
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
KAIKDLRADIDRALQLPPDSRDKTLSTRIYDVTVRELDRLDDVSQDIGKRIRSLDISLTP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
YLSVRGTTGIVRNSEGNTVLAVSNALRKGEPLAPKDLTEVQAEEVRGQLGWSMVKEEVDN
CEEECCCCCEEECCCCCEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KDIPASLREAVAKADSAFFSGSFKTLKEDTLKTLSNGGKPPLTLDQWRSAAVPALETIGA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH
VAITAMDEMADAAGAAAGRARASLALYAGLLVVALLIAGAGLVVVIRRVTRPISGLTATM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
QRLADGDLAVDVAGTRRHDEVGSMAKAVLVFKEEMARNTALEAEAKAAHVQAEAERREGM
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLAAEFESAVGGIIGSVASASTQLHGTARTMAEAARRTSEKSTAVAAAAEEASTNVVMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
ASSAEELGSSVDEIGRQVQQSAEMSSVAVAEAQKTGTVIQDLAQAASRIGDVVGLISSIA
ECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQTNLLALNATIEAARAGDAGKGFAVVASEVKALATQTAKATEEIESQIGAIQATTKQAV
HHHCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIEGVGSQIRKMSDVATSISAAVEEQGVATREIVRNVDQAATGTNSVTAHISEVAQTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ETGSAAGQVLTAAAALTDQAKRLEAEMQRFLGTVRTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLSIKLTLLALFGLVSLIMAALCGSSLLTAYKRDLAAAEAQAYAEIDRGLFQAFTTLRT
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSDSAAALSRPLDAMPPLVAGIAKRREKVDAGFAVALTELSSQGTPEAKDLAGRVEGIR
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
KAIKDLRADIDRALQLPPDSRDKTLSTRIYDVTVRELDRLDDVSQDIGKRIRSLDISLTP
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
YLSVRGTTGIVRNSEGNTVLAVSNALRKGEPLAPKDLTEVQAEEVRGQLGWSMVKEEVDN
CEEECCCCCEEECCCCCEEEEECHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
KDIPASLREAVAKADSAFFSGSFKTLKEDTLKTLSNGGKPPLTLDQWRSAAVPALETIGA
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHH
VAITAMDEMADAAGAAAGRARASLALYAGLLVVALLIAGAGLVVVIRRVTRPISGLTATM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH
QRLADGDLAVDVAGTRRHDEVGSMAKAVLVFKEEMARNTALEAEAKAAHVQAEAERREGM
HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLAAEFESAVGGIIGSVASASTQLHGTARTMAEAARRTSEKSTAVAAAAEEASTNVVMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
ASSAEELGSSVDEIGRQVQQSAEMSSVAVAEAQKTGTVIQDLAQAASRIGDVVGLISSIA
ECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQTNLLALNATIEAARAGDAGKGFAVVASEVKALATQTAKATEEIESQIGAIQATTKQAV
HHHCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVIEGVGSQIRKMSDVATSISAAVEEQGVATREIVRNVDQAATGTNSVTAHISEVAQTAD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ETGSAAGQVLTAAAALTDQAKRLEAEMQRFLGTVRTA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]