| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is trxA [C]
Identifier: 158422339
GI number: 158422339
Start: 800514
End: 800834
Strand: Direct
Name: trxA [C]
Synonym: AZC_0715
Alternate gene names: 158422339
Gene position: 800514-800834 (Clockwise)
Preceding gene: 158422338
Following gene: 158422341
Centisome position: 14.91
GC content: 65.11
Gene sequence:
>321_bases ATGGCCGTCGAAAAAGTATCCGATCAGAGCTTCGATGCCGACGTGCTCCAGTCCTCCACCCCGGTGGTCGTGGACTTCTG GGCCGAGTGGTGCGGCCCCTGCCGCATGGTCGCCCCGGTGCTCGACGAGCTCTCCGGCGAGCTTGGCGACAAGGTGAAGA TCGTGAAGCTGAACGTGGACGAGAACCCGGTGACGGCGTCCAAGTACGGCATCATGTCCATCCCCACCCTGCTGCTGTTC AAGGATGGCAAGATCGCCTCCCGTCAGGTGGGCGCCGCCGCCAAGGCCAAGCTCGCGAGCTGGATCGGCTCCGCCGCCTG A
Upstream 100 bases:
>100_bases CACGCCGCCGTGACGCGCCTTGACGGAGAGGGGAGGGGCTTCTTACGTTGAGCCCAAGATCCAGTGGATCGCCTGTGAAA TCCCTACGAGGTATACGCCC
Downstream 100 bases:
>100_bases GCTGCGGGCCGGTCGTTCGGGAATGCAAAAGGCGGGTCCTTCGGGGCCCGCCTTTTTGTTTGTCCATTTGCCTTGGGCCG CCGCAGCGACTCAGGGGGCG
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAVEKVSDQSFDADVLQSSTPVVVDFWAEWCGPCRMVAPVLDELSGELGDKVKIVKLNVDENPVTASKYGIMSIPTLLLF KDGKIASRQVGAAAKAKLASWIGSAA
Sequences:
>Translated_106_residues MAVEKVSDQSFDADVLQSSTPVVVDFWAEWCGPCRMVAPVLDELSGELGDKVKIVKLNVDENPVTASKYGIMSIPTLLLF KDGKIASRQVGAAAKAKLASWIGSAA >Mature_105_residues AVEKVSDQSFDADVLQSSTPVVVDFWAEWCGPCRMVAPVLDELSGELGDKVKIVKLNVDENPVTASKYGIMSIPTLLLFK DGKIASRQVGAAAKAKLASWIGSAA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=92, Percent_Identity=34.7826086956522, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082331, Length=98, Percent_Identity=54.0816326530612, Blast_Score=127, Evalue=2e-31, Organism=Escherichia coli, GI1788936, Length=91, Percent_Identity=41.7582417582418, Blast_Score=93, Evalue=3e-21, Organism=Caenorhabditis elegans, GI212646193, Length=95, Percent_Identity=42.1052631578947, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17509965, Length=89, Percent_Identity=38.2022471910112, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17554386, Length=100, Percent_Identity=33, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17510299, Length=75, Percent_Identity=41.3333333333333, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=83, Percent_Identity=45.7831325301205, Blast_Score=74, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321648, Length=92, Percent_Identity=39.1304347826087, Blast_Score=73, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=95, Percent_Identity=33.6842105263158, Blast_Score=69, Evalue=9e-14, Organism=Drosophila melanogaster, GI24639826, Length=92, Percent_Identity=40.2173913043478, Blast_Score=82, Evalue=7e-17, Organism=Drosophila melanogaster, GI28573567, Length=99, Percent_Identity=34.3434343434343, Blast_Score=81, Evalue=1e-16, Organism=Drosophila melanogaster, GI17648013, Length=78, Percent_Identity=44.8717948717949, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583090, Length=78, Percent_Identity=44.8717948717949, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI21358065, Length=99, Percent_Identity=34.3434343434343, Blast_Score=73, Evalue=3e-14, Organism=Drosophila melanogaster, GI24664269, Length=65, Percent_Identity=38.4615384615385, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11282; Mature: 11151
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEKVSDQSFDADVLQSSTPVVVDFWAEWCGPCRMVAPVLDELSGELGDKVKIVKLNVD CCCCCCCCCCCCHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC ENPVTASKYGIMSIPTLLLFKDGKIASRQVGAAAKAKLASWIGSAA CCCCCCCCCCHHCCCEEEEEECCCCCCHHHCHHHHHHHHHHHCCCC >Mature Secondary Structure AVEKVSDQSFDADVLQSSTPVVVDFWAEWCGPCRMVAPVLDELSGELGDKVKIVKLNVD CCCCCCCCCCCHHHHCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECC ENPVTASKYGIMSIPTLLLFKDGKIASRQVGAAAKAKLASWIGSAA CCCCCCCCCCHHCCCEEEEEECCCCCCHHHCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7021558 [H]