| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cysK [H]
Identifier: 158422333
GI number: 158422333
Start: 787502
End: 788485
Strand: Direct
Name: cysK [H]
Synonym: AZC_0709
Alternate gene names: 158422333
Gene position: 787502-788485 (Clockwise)
Preceding gene: 158422332
Following gene: 158422334
Centisome position: 14.67
GC content: 69.0
Gene sequence:
>984_bases ATGGCGACGTCCGCTGCCAAAGCCGCCTCTGCCGCCCCGCGTCCGGGCCGGGGCCGTGTCTATGATTCCATCACCGAGAC CGTCGGCAACACGCCGCTGGTGCGCCTGCACCGGCTGCCCGAGCTGCGCGGCGTGAAGGCCAACATCCTGGCCAAGCTCG AGTTCTTCAATCCCATCGCCAGCGTGAAGGACCGCATCGGCGTCGCCATGGTCGACGCCATCGCGGAAGCCGGCCAGCTC GATCCCGATACCGTGCTGGTTGAGCCCACCTCCGGCAACACCGGCATCGCGCTCGCCTTCGTCGCCGCCGCCCGTGGCCT GCGCCTCATCCTCGTCATGCCCGAGAGCATGTCGGTGGAGCGCCGCAAGATGCTGGCCCTGCTGGGCGCCGAGCTGGTGC TGACGCCCGCCAACCTCGGCATGCGCGGCGCCGTCACCCGCGCCGAGGAACTGCTCAAGGAAATCCCCAAGTCGGTGATG CCGCAGCAGTTCAAGAACAAGGCGAATCCCGCCGTCCACCGCGCCACCACGGCGGAGGAGATCTGGAACGATACGGACGG CGCGGTCGATCTCGTCGTCTCTGGCGTCGGCACTGGCGGCACCATCACCGGCATCGGCCAGGTGCTGAAGCCCCGCAAGG CCTCCCTGCGCATGGTGGCGGTGGAGCCCGAGGACAGCCCGGTGCTCTCCGGCGGCCAGCCCGGCCCGCACAAGATCCAG GGCATCGGCGCCGGCTTCGTGCCGGACGTGCTCGACCGTTCGATCATCGACGAGGTGGTAACGGTGGGCAATCAGACCGC CTTCGACACCGCCCGCGCGCTTGCCCGCTATGAGGGTATCCCCGGCGGCATCTCCTCGGGTGCGGCGGTGGCCGCGGCGC TGGAGATCGGCGCCCGCAAGGAGAATGAAGGCAAGAACATCGTGGTGATCGTGCCCTCCTTCGCCGAGCGCTACCTCTCG ACGGCGCTGTTCGAGGGTCTCTGA
Upstream 100 bases:
>100_bases CATGGCATCGAGAACGACCGCATCGATTTCATCATCTGATCGTTCAACCCATACGTCCGACGGGCGCCGCGCGCCGTCCA ATCCCTGAGGAGACCGTCCA
Downstream 100 bases:
>100_bases TCCTCGTCTTCGTCCCGCGTTCTGCCGCGCCTCTCCCGCCCACCGGCGGGGGAGGCGTTTTGCATTGGGGGCCTCCGTCC CGAATCGGGACGTTAGGGAA
Product: cysteine synthase K/M
Products: NA
Alternate protein names: OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MATSAAKAASAAPRPGRGRVYDSITETVGNTPLVRLHRLPELRGVKANILAKLEFFNPIASVKDRIGVAMVDAIAEAGQL DPDTVLVEPTSGNTGIALAFVAAARGLRLILVMPESMSVERRKMLALLGAELVLTPANLGMRGAVTRAEELLKEIPKSVM PQQFKNKANPAVHRATTAEEIWNDTDGAVDLVVSGVGTGGTITGIGQVLKPRKASLRMVAVEPEDSPVLSGGQPGPHKIQ GIGAGFVPDVLDRSIIDEVVTVGNQTAFDTARALARYEGIPGGISSGAAVAAALEIGARKENEGKNIVVIVPSFAERYLS TALFEGL
Sequences:
>Translated_327_residues MATSAAKAASAAPRPGRGRVYDSITETVGNTPLVRLHRLPELRGVKANILAKLEFFNPIASVKDRIGVAMVDAIAEAGQL DPDTVLVEPTSGNTGIALAFVAAARGLRLILVMPESMSVERRKMLALLGAELVLTPANLGMRGAVTRAEELLKEIPKSVM PQQFKNKANPAVHRATTAEEIWNDTDGAVDLVVSGVGTGGTITGIGQVLKPRKASLRMVAVEPEDSPVLSGGQPGPHKIQ GIGAGFVPDVLDRSIIDEVVTVGNQTAFDTARALARYEGIPGGISSGAAVAAALEIGARKENEGKNIVVIVPSFAERYLS TALFEGL >Mature_326_residues ATSAAKAASAAPRPGRGRVYDSITETVGNTPLVRLHRLPELRGVKANILAKLEFFNPIASVKDRIGVAMVDAIAEAGQLD PDTVLVEPTSGNTGIALAFVAAARGLRLILVMPESMSVERRKMLALLGAELVLTPANLGMRGAVTRAEELLKEIPKSVMP QQFKNKANPAVHRATTAEEIWNDTDGAVDLVVSGVGTGGTITGIGQVLKPRKASLRMVAVEPEDSPVLSGGQPGPHKIQG IGAGFVPDVLDRSIIDEVVTVGNQTAFDTARALARYEGIPGGISSGAAVAAALEIGARKENEGKNIVVIVPSFAERYLST ALFEGL
Specific function: Catalyzes the conversion of O-acetylserine (OAS) to cysteine through the elimination of acetate and addition of hydrogen sulfide [H]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=313, Percent_Identity=41.2140575079872, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI295821200, Length=313, Percent_Identity=41.2140575079872, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI4557415, Length=313, Percent_Identity=41.2140575079872, Blast_Score=235, Evalue=5e-62, Organism=Escherichia coli, GI1788754, Length=318, Percent_Identity=54.0880503144654, Blast_Score=288, Evalue=3e-79, Organism=Escherichia coli, GI2367138, Length=302, Percent_Identity=39.0728476821192, Blast_Score=203, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17535051, Length=303, Percent_Identity=49.8349834983498, Blast_Score=288, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17562970, Length=300, Percent_Identity=50.3333333333333, Blast_Score=282, Evalue=2e-76, Organism=Caenorhabditis elegans, GI32566674, Length=295, Percent_Identity=50.8474576271186, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI115535073, Length=309, Percent_Identity=50.8090614886731, Blast_Score=268, Evalue=3e-72, Organism=Caenorhabditis elegans, GI17561720, Length=309, Percent_Identity=50.8090614886731, Blast_Score=254, Evalue=4e-68, Organism=Caenorhabditis elegans, GI32566672, Length=212, Percent_Identity=49.5283018867925, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17534315, Length=330, Percent_Identity=41.8181818181818, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI25147552, Length=323, Percent_Identity=39.3188854489164, Blast_Score=177, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17561716, Length=121, Percent_Identity=51.2396694214876, Blast_Score=112, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321594, Length=314, Percent_Identity=37.8980891719745, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321449, Length=339, Percent_Identity=33.6283185840708, Blast_Score=121, Evalue=1e-28, Organism=Drosophila melanogaster, GI24643623, Length=312, Percent_Identity=39.4230769230769, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI20129101, Length=312, Percent_Identity=39.4230769230769, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34179; Mature: 34048
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSAAKAASAAPRPGRGRVYDSITETVGNTPLVRLHRLPELRGVKANILAKLEFFNPIA CCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCCHHHHHHHHHHHCHHH SVKDRIGVAMVDAIAEAGQLDPDTVLVEPTSGNTGIALAFVAAARGLRLILVMPESMSVE HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHH RRKMLALLGAELVLTPANLGMRGAVTRAEELLKEIPKSVMPQQFKNKANPAVHRATTAEE HHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHH IWNDTDGAVDLVVSGVGTGGTITGIGQVLKPRKASLRMVAVEPEDSPVLSGGQPGPHKIQ HHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEE GIGAGFVPDVLDRSIIDEVVTVGNQTAFDTARALARYEGIPGGISSGAAVAAALEIGARK ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC ENEGKNIVVIVPSFAERYLSTALFEGL CCCCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure ATSAAKAASAAPRPGRGRVYDSITETVGNTPLVRLHRLPELRGVKANILAKLEFFNPIA CCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHCCCCCCCCHHHHHHHHHHHCHHH SVKDRIGVAMVDAIAEAGQLDPDTVLVEPTSGNTGIALAFVAAARGLRLILVMPESMSVE HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHH RRKMLALLGAELVLTPANLGMRGAVTRAEELLKEIPKSVMPQQFKNKANPAVHRATTAEE HHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHH IWNDTDGAVDLVVSGVGTGGTITGIGQVLKPRKASLRMVAVEPEDSPVLSGGQPGPHKIQ HHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEE GIGAGFVPDVLDRSIIDEVVTVGNQTAFDTARALARYEGIPGGISSGAAVAAALEIGARK ECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC ENEGKNIVVIVPSFAERYLSTALFEGL CCCCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]