| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yfhP [C]
Identifier: 158422332
GI number: 158422332
Start: 787000
End: 787440
Strand: Direct
Name: yfhP [C]
Synonym: AZC_0708
Alternate gene names: 158422332
Gene position: 787000-787440 (Clockwise)
Preceding gene: 158422331
Following gene: 158422333
Centisome position: 14.66
GC content: 70.07
Gene sequence:
>441_bases ATGCCGCGTTTGTCCGACAAGAGTCTTCTCGCCATCGCCGCCGTCGTCGATGTCGCCGTTCACGCCCGTGGAACGCCGGT GGCCGCCAAGTCCCTCGCTGCCCGTCACGGCCTGCCGCCCCGGCGGCTGGAGCCGGTGCTGCAGGCCCTCGTCCATGCGG GCGTGCTGAAGGGCGTGCGCGGGCCGCGCGGCGGCTATGAGCTGGCGCGCGAGCGCCGCCGGGTCTCCGTGGCGGAGATC GTTCGCGTGGTGGAGGGCGCCGAGGAGGAGAAGGAAATCATCCTCCCGCCGCTGGTGACGGAAGTGGTGCAGCCCGCCGT CGCCGCCGCCGAACAGACCTTCGACACCGCGCTCGACACCGTGACCCTGGAGGATCTCTGCCGCGCGGCGGACCAGAAGG GTCATGGCATCGAGAACGACCGCATCGATTTCATCATCTGA
Upstream 100 bases:
>100_bases CTGGTGGAAACTGGAAATTTGGGCGAAACTGCACGCGGCGTCGGTGGTTTCGGCTCGACAGGGCTCGACCGGACGCCCTA ACCGGGATAGCCACAGCCCC
Downstream 100 bases:
>100_bases TCGTTCAACCCATACGTCCGACGGGCGCCGCGCGCCGTCCAATCCCTGAGGAGACCGTCCAATGGCGACGTCCGCTGCCA AAGCCGCCTCTGCCGCCCCG
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator BadM/Rrf2 Family; Rrf2 Family Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPRLSDKSLLAIAAVVDVAVHARGTPVAAKSLAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEQTFDTALDTVTLEDLCRAADQKGHGIENDRIDFII
Sequences:
>Translated_146_residues MPRLSDKSLLAIAAVVDVAVHARGTPVAAKSLAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEI VRVVEGAEEEKEIILPPLVTEVVQPAVAAAEQTFDTALDTVTLEDLCRAADQKGHGIENDRIDFII >Mature_145_residues PRLSDKSLLAIAAVVDVAVHARGTPVAAKSLAARHGLPPRRLEPVLQALVHAGVLKGVRGPRGGYELARERRRVSVAEIV RVVEGAEEEKEIILPPLVTEVVQPAVAAAEQTFDTALDTVTLEDLCRAADQKGHGIENDRIDFII
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15690; Mature: 15559
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLSDKSLLAIAAVVDVAVHARGTPVAAKSLAARHGLPPRRLEPVLQALVHAGVLKGVR CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEQTFDTALDT CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH VTLEDLCRAADQKGHGIENDRIDFII HHHHHHHHHHHHCCCCCCCCCCCEEC >Mature Secondary Structure PRLSDKSLLAIAAVVDVAVHARGTPVAAKSLAARHGLPPRRLEPVLQALVHAGVLKGVR CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC GPRGGYELARERRRVSVAEIVRVVEGAEEEKEIILPPLVTEVVQPAVAAAEQTFDTALDT CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH VTLEDLCRAADQKGHGIENDRIDFII HHHHHHHHHHHHCCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA