| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is prpB [C]
Identifier: 158422311
GI number: 158422311
Start: 759244
End: 760083
Strand: Reverse
Name: prpB [C]
Synonym: AZC_0687
Alternate gene names: 158422311
Gene position: 760083-759244 (Counterclockwise)
Preceding gene: 158422312
Following gene: 158422310
Centisome position: 14.15
GC content: 71.19
Gene sequence:
>840_bases GTGTCCGAGCAGATTGCCAAGTTCGAGCGCTTCAAGGCGCTGCACCAGCAGGCCCAGGCCTTCGTCATCCCCAACCCGTG GGATGCCGGGTCCGCGCGCCTTCTTGCCAGCCTCGGCTTCGAGGCGCTGGCCACCACCAGCGCCGGCTACGCCTTCTCCA AGGGCAAGCGGGATTCCGCCGCGAGCCTGACGCGGGGCGAGATTCTGGAGAATGCTTCCGAGATCGTCCGCGCCACCCAC CTGCCCGTCTCGGCCGATCTGGAGGACGGCTTCGGCGCGGCGCCCGACGCCTGCGCGGAAACGATCCGCCTCGCCTGCGC CATCGGCCTCGTGGGCGGCTCTATCGAGGATGCGACGGGCGATCCCGCGACGCCCATCTATGATCTGGCGCACGCGATCC AGCGCGTGGAGGCCGCGGCCGAGGCGGCGCGCGACCTGCCCTTCCTGCTGACGGCGCGGGCGGAGAACTTCCTGTGCGGC CGGCCGGACCTCGACGACACCATCCGCCGGCTCCAGGCCTTTTCTGCCGCCGGCGCCCATGTGCTCTACGCGCCCGGCCT GCCGAACCTCGAGGCGATCCGAACCGTCTGCGCCGCCGTGGACAAGCCCGTGAATGTCGTGATGGGGCTGCGCGGCCCCT CCTATTCCGTCGCCGAACTCTCGGCGGCCGGCGTGCGCCGGGTGAGCGTCGGCGGCTCCTTCGCGCGGGCCGCGCTCGGC GCCCTGATGCGGGCGGCGCAGGAGGTGCGGATGTTCGGCACCTTCAGCTATGCCGCCGAAGCGCTGCCGGGAAAGGAGAT CATCGCTCTCATGTCGGAAACCCGCCCCGAGCGCTCCTGA
Upstream 100 bases:
>100_bases GCCCACACGGACGTCGGCGCTTTTCTCGCGACCCAGTTCAAGCTGAAGCCCTGAGACCACGGGCGGAGCCCCCCACCTCC CCTTCGTTCTGGAGACAGGC
Downstream 100 bases:
>100_bases GCCGCCGGTGCACCGCACAATCCTGAGGCAGTTGCTCACCCCACCGCCAGATCACTGCCCATCAGGACATCGTGCTCATT TTTTGATCTTTCGCATTCTC
Product: carboxyvinyl-carboxyphosphonate phosphorylmutase
Products: Pyruvate; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSEQIAKFERFKALHQQAQAFVIPNPWDAGSARLLASLGFEALATTSAGYAFSKGKRDSAASLTRGEILENASEIVRATH LPVSADLEDGFGAAPDACAETIRLACAIGLVGGSIEDATGDPATPIYDLAHAIQRVEAAAEAARDLPFLLTARAENFLCG RPDLDDTIRRLQAFSAAGAHVLYAPGLPNLEAIRTVCAAVDKPVNVVMGLRGPSYSVAELSAAGVRRVSVGGSFARAALG ALMRAAQEVRMFGTFSYAAEALPGKEIIALMSETRPERS
Sequences:
>Translated_279_residues MSEQIAKFERFKALHQQAQAFVIPNPWDAGSARLLASLGFEALATTSAGYAFSKGKRDSAASLTRGEILENASEIVRATH LPVSADLEDGFGAAPDACAETIRLACAIGLVGGSIEDATGDPATPIYDLAHAIQRVEAAAEAARDLPFLLTARAENFLCG RPDLDDTIRRLQAFSAAGAHVLYAPGLPNLEAIRTVCAAVDKPVNVVMGLRGPSYSVAELSAAGVRRVSVGGSFARAALG ALMRAAQEVRMFGTFSYAAEALPGKEIIALMSETRPERS >Mature_278_residues SEQIAKFERFKALHQQAQAFVIPNPWDAGSARLLASLGFEALATTSAGYAFSKGKRDSAASLTRGEILENASEIVRATHL PVSADLEDGFGAAPDACAETIRLACAIGLVGGSIEDATGDPATPIYDLAHAIQRVEAAAEAARDLPFLLTARAENFLCGR PDLDDTIRRLQAFSAAGAHVLYAPGLPNLEAIRTVCAAVDKPVNVVMGLRGPSYSVAELSAAGVRRVSVGGSFARAALGA LMRAAQEVRMFGTFSYAAEALPGKEIIALMSETRPERS
Specific function: Catalyzes The Formation Of Pyruvate And Succinate From 2-Methylisocitrate (By Similarity). [C]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786525, Length=248, Percent_Identity=27.4193548387097, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR015813 [H]
Pfam domain/function: NA
EC number: 4.1.3.30 [C]
Molecular weight: Translated: 29303; Mature: 29171
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQIAKFERFKALHQQAQAFVIPNPWDAGSARLLASLGFEALATTSAGYAFSKGKRDSA CCHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCHHHHHHCCCCCHHCCCCCCHH ASLTRGEILENASEIVRATHLPVSADLEDGFGAAPDACAETIRLACAIGLVGGSIEDATG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC DPATPIYDLAHAIQRVEAAAEAARDLPFLLTARAENFLCGRPDLDDTIRRLQAFSAAGAH CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCE VLYAPGLPNLEAIRTVCAAVDKPVNVVMGLRGPSYSVAELSAAGVRRVSVGGSFARAALG EEECCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCCEEEECCCHHHHHHHH ALMRAAQEVRMFGTFSYAAEALPGKEIIALMSETRPERS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SEQIAKFERFKALHQQAQAFVIPNPWDAGSARLLASLGFEALATTSAGYAFSKGKRDSA CHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHCHHHHHHCCCCCHHCCCCCCHH ASLTRGEILENASEIVRATHLPVSADLEDGFGAAPDACAETIRLACAIGLVGGSIEDATG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC DPATPIYDLAHAIQRVEAAAEAARDLPFLLTARAENFLCGRPDLDDTIRRLQAFSAAGAH CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCE VLYAPGLPNLEAIRTVCAAVDKPVNVVMGLRGPSYSVAELSAAGVRRVSVGGSFARAALG EEECCCCCCHHHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHCCEEEECCCHHHHHHHH ALMRAAQEVRMFGTFSYAAEALPGKEIIALMSETRPERS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: methylisocitrate [C]
Specific reaction: methylisocitrate <==> Pyruvate + Succinate [C]
General reaction: Elimination [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]