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The map label for this gene is fliM [H]

Identifier: 158422267

GI number: 158422267

Start: 713922

End: 714851

Strand: Reverse

Name: fliM [H]

Synonym: AZC_0643

Alternate gene names: 158422267

Gene position: 714851-713922 (Counterclockwise)

Preceding gene: 158422268

Following gene: 158422266

Centisome position: 13.31

GC content: 64.09

Gene sequence:

>930_bases
ATGAATGCAGCGCATTCCCATCAAGACATTCGAGACATGCTGCTCGATGCGGCGGGGCTGTCGATCGACCGCATGCCCAT
GCTGCACGTCATCTTCGACCGCCTGGGCACGCTCTGCGCCGAAGGCCTCCGCCAGCTGGCCGCCTCACAGGCCTTCTACT
CGCTCTCGAGCATCGAGACGGGCCGCATCGGCGACGTGCTGGAAATGTACGAAGGCATGGCGGTGGCCGGCGTGTTCCAC
GTTCCGATGTGGGACAGCCACATCATCGTCGGCTTCGACCGCGACTTCGTGTTCACGATGATCGAGGCGCTGTTCGGCGC
CGACGGCTCCGAGCCGCCGGTGGACGACGAGCGCAGCTTCTCCAACATCGAGCTGCGCATCTCGCAGGCCATCTTCGAGC
AGATGCAGAAGGCGCTCCACAACGCCTTCACCATGGTGAGCGACACCCAGTTCAAGTTCGAGCGGCAGGAAACCCGCATG
GACTTCGCGGTCATCGGCCGCCGCAACAACCTTGCCGTCACCGCCAAGTTCCTGCTCCAGGCGCTGAACCGCGGCGGCGA
GATGTTCGTCATCATCCCGCAGTCGGCCCTGACGCCCATGCGCCAGGCACTCGCCCGCACCACGCCCGCCGAGACTTCCG
GCCGCGACCCGATCTGGACCAAGCAGATCCGCGACGAGGTCAACCGCACGCAGGTCAAGGTTCGCGCAATCCTCGAGGAG
CGACACTATCCCCTCGGCGAGATCGCCGACTTCAAGGTGGGCCAGGTGCTCCATCTGCAGGCCACGCCACGGACGCTCGT
GAAGCTGGAAAGCGCCGACCAGCCGCTCTTCTGGTGCCATCTCGGCCAGGCCGAAGGCGCTTATGTGCTGCGGGTCGAAG
AGCAGATCAATCTGAACCAGGAGTTCGTCGATGACATTCTTCCCCGTTGA

Upstream 100 bases:

>100_bases
GCGGAAGGCGAGCGTCCGACCATCGACGAGGTCGAGAGCGAGGCCATCTCGAACGTGCCGTCCTCGAACTCTCCGCCCCA
GCAGCAGGCCGCGTGATCCC

Downstream 100 bases:

>100_bases
CATGGTGCTCCTGGTCGCGCTCGTCATGACCACCGCCTGCGTGGTATTGGTCTATCGCAAGCTCAAGGAACTCGAGGCGC
ATCAGGCCCATTACGAGCGG

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNAAHSHQDIRDMLLDAAGLSIDRMPMLHVIFDRLGTLCAEGLRQLAASQAFYSLSSIETGRIGDVLEMYEGMAVAGVFH
VPMWDSHIIVGFDRDFVFTMIEALFGADGSEPPVDDERSFSNIELRISQAIFEQMQKALHNAFTMVSDTQFKFERQETRM
DFAVIGRRNNLAVTAKFLLQALNRGGEMFVIIPQSALTPMRQALARTTPAETSGRDPIWTKQIRDEVNRTQVKVRAILEE
RHYPLGEIADFKVGQVLHLQATPRTLVKLESADQPLFWCHLGQAEGAYVLRVEEQINLNQEFVDDILPR

Sequences:

>Translated_309_residues
MNAAHSHQDIRDMLLDAAGLSIDRMPMLHVIFDRLGTLCAEGLRQLAASQAFYSLSSIETGRIGDVLEMYEGMAVAGVFH
VPMWDSHIIVGFDRDFVFTMIEALFGADGSEPPVDDERSFSNIELRISQAIFEQMQKALHNAFTMVSDTQFKFERQETRM
DFAVIGRRNNLAVTAKFLLQALNRGGEMFVIIPQSALTPMRQALARTTPAETSGRDPIWTKQIRDEVNRTQVKVRAILEE
RHYPLGEIADFKVGQVLHLQATPRTLVKLESADQPLFWCHLGQAEGAYVLRVEEQINLNQEFVDDILPR
>Mature_309_residues
MNAAHSHQDIRDMLLDAAGLSIDRMPMLHVIFDRLGTLCAEGLRQLAASQAFYSLSSIETGRIGDVLEMYEGMAVAGVFH
VPMWDSHIIVGFDRDFVFTMIEALFGADGSEPPVDDERSFSNIELRISQAIFEQMQKALHNAFTMVSDTQFKFERQETRM
DFAVIGRRNNLAVTAKFLLQALNRGGEMFVIIPQSALTPMRQALARTTPAETSGRDPIWTKQIRDEVNRTQVKVRAILEE
RHYPLGEIADFKVGQVLHLQATPRTLVKLESADQPLFWCHLGQAEGAYVLRVEEQINLNQEFVDDILPR

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=288, Percent_Identity=22.9166666666667, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 34934; Mature: 34934

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAHSHQDIRDMLLDAAGLSIDRMPMLHVIFDRLGTLCAEGLRQLAASQAFYSLSSIET
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIGDVLEMYEGMAVAGVFHVPMWDSHIIVGFDRDFVFTMIEALFGADGSEPPVDDERSF
CCCHHHHHHHCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
SNIELRISQAIFEQMQKALHNAFTMVSDTQFKFERQETRMDFAVIGRRNNLAVTAKFLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
ALNRGGEMFVIIPQSALTPMRQALARTTPAETSGRDPIWTKQIRDEVNRTQVKVRAILEE
HHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHYPLGEIADFKVGQVLHLQATPRTLVKLESADQPLFWCHLGQAEGAYVLRVEEQINLNQ
HCCCCCCCCCCCCCCEEEEECCCHHHEEECCCCCCEEEEEECCCCCEEEEEEHHHHCCCH
EFVDDILPR
HHHHHHCCC
>Mature Secondary Structure
MNAAHSHQDIRDMLLDAAGLSIDRMPMLHVIFDRLGTLCAEGLRQLAASQAFYSLSSIET
CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GRIGDVLEMYEGMAVAGVFHVPMWDSHIIVGFDRDFVFTMIEALFGADGSEPPVDDERSF
CCCHHHHHHHCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCC
SNIELRISQAIFEQMQKALHNAFTMVSDTQFKFERQETRMDFAVIGRRNNLAVTAKFLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH
ALNRGGEMFVIIPQSALTPMRQALARTTPAETSGRDPIWTKQIRDEVNRTQVKVRAILEE
HHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RHYPLGEIADFKVGQVLHLQATPRTLVKLESADQPLFWCHLGQAEGAYVLRVEEQINLNQ
HCCCCCCCCCCCCCCEEEEECCCHHHEEECCCCCCEEEEEECCCCCEEEEEEHHHHCCCH
EFVDDILPR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1315735 [H]