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The map label for this gene is tetR

Identifier: 158422217

GI number: 158422217

Start: 658318

End: 659040

Strand: Direct

Name: tetR

Synonym: AZC_0593

Alternate gene names: NA

Gene position: 658318-659040 (Clockwise)

Preceding gene: 158422210

Following gene: 158422218

Centisome position: 12.26

GC content: 70.12

Gene sequence:

>723_bases
TTGGTCCGGAGGGGCATGAGCGAGGACAAGGGAAAGAGCGACCGACGCCGGGCGGTGCCGTCCGGACAGGCTGCCGGGGC
CAGACGGTCCGCGCTCGCGCCCGAGGCGCCAGGGCGCCCGGATCGCCGCGCCGCCATTCTCGCCAGTGCCGAGGCACTGT
TCGCCGAGCGCGGCTATGCGGACGTGTCCGTGCGCGATATAGCCACGCGGGCGGGCGTGCCGGTGGCGCTGGTGGGCTAT
TATTTCGGCCGCAAGCCGGAGCTCTTCACCACCATCTTCGAGCGGCGCCAGACCTATATCACCGAGCGCATCGCGCGCAT
CGAGGCGGTGGACGCGCGGCCCGACAATCCGGCCGCCGTGGAGGCCCTTGTGCGGGCCTGGGCCGAGCCGGTTATCACCA
TGCGCGGCACGGAGGCGGGCGACGTGTTCGCGCTTCTCGTGGCGCGCACCGCCTGGGATCCGGGCCCCGAGGCGACCGCC
ATCATCGAGCGCTTCTACGATCCTCTTGCGCGGGCCTTCTTCGGCGCCATGCAGCGGGCGCTTCCCGCCTGTCCGCCGGA
CCGCATCGTCTGGGCCTATGAATATGCGGTGGGCGCGTTGCTCATGTATGTGGGCGACAAGCGCATCGAGCGCCTGACGG
AGGGCCGCGCTGCGACCGCCGATCCGGCTCTGTGCGAAGATTTCATCCGCTTTGTCAGCGCGGGCTTTGAAACGCTGCGG
TGA

Upstream 100 bases:

>100_bases
TATGGTTGTTCAATAGTCCGCCATGAAGCCGATGCGGTCGCCGTGGCGCAACGTCATCCGGCTGTGTAAGAGCTTGGGCG
CAGGCCGCAGGATGAAGCCG

Downstream 100 bases:

>100_bases
GCCGCATCCGAGCGCGCCGCCCACCAACGCGCCGCCCTTGGCGTTCGCCCGCCGGCGGGCGTAGCATGCGGGCCGTCGCT
GCAACCGGTTCCGGTCATGT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR Family Transcription Factor; TetR Family Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MVRRGMSEDKGKSDRRRAVPSGQAAGARRSALAPEAPGRPDRRAAILASAEALFAERGYADVSVRDIATRAGVPVALVGY
YFGRKPELFTTIFERRQTYITERIARIEAVDARPDNPAAVEALVRAWAEPVITMRGTEAGDVFALLVARTAWDPGPEATA
IIERFYDPLARAFFGAMQRALPACPPDRIVWAYEYAVGALLMYVGDKRIERLTEGRAATADPALCEDFIRFVSAGFETLR

Sequences:

>Translated_240_residues
MVRRGMSEDKGKSDRRRAVPSGQAAGARRSALAPEAPGRPDRRAAILASAEALFAERGYADVSVRDIATRAGVPVALVGY
YFGRKPELFTTIFERRQTYITERIARIEAVDARPDNPAAVEALVRAWAEPVITMRGTEAGDVFALLVARTAWDPGPEATA
IIERFYDPLARAFFGAMQRALPACPPDRIVWAYEYAVGALLMYVGDKRIERLTEGRAATADPALCEDFIRFVSAGFETLR
>Mature_240_residues
MVRRGMSEDKGKSDRRRAVPSGQAAGARRSALAPEAPGRPDRRAAILASAEALFAERGYADVSVRDIATRAGVPVALVGY
YFGRKPELFTTIFERRQTYITERIARIEAVDARPDNPAAVEALVRAWAEPVITMRGTEAGDVFALLVARTAWDPGPEATA
IIERFYDPLARAFFGAMQRALPACPPDRIVWAYEYAVGALLMYVGDKRIERLTEGRAATADPALCEDFIRFVSAGFETLR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26366; Mature: 26366

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRGMSEDKGKSDRRRAVPSGQAAGARRSALAPEAPGRPDRRAAILASAEALFAERGYA
CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DVSVRDIATRAGVPVALVGYYFGRKPELFTTIFERRQTYITERIARIEAVDARPDNPAAV
CCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EALVRAWAEPVITMRGTEAGDVFALLVARTAWDPGPEATAIIERFYDPLARAFFGAMQRA
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPACPPDRIVWAYEYAVGALLMYVGDKRIERLTEGRAATADPALCEDFIRFVSAGFETLR
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRRGMSEDKGKSDRRRAVPSGQAAGARRSALAPEAPGRPDRRAAILASAEALFAERGYA
CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DVSVRDIATRAGVPVALVGYYFGRKPELFTTIFERRQTYITERIARIEAVDARPDNPAAV
CCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
EALVRAWAEPVITMRGTEAGDVFALLVARTAWDPGPEATAIIERFYDPLARAFFGAMQRA
HHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LPACPPDRIVWAYEYAVGALLMYVGDKRIERLTEGRAATADPALCEDFIRFVSAGFETLR
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA