| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422214
Identifier: 158422214
GI number: 158422214
Start: 655001
End: 656023
Strand: Reverse
Name: 158422214
Synonym: AZC_0590
Alternate gene names: NA
Gene position: 656023-655001 (Counterclockwise)
Preceding gene: 158422215
Following gene: 158422213
Centisome position: 12.22
GC content: 68.33
Gene sequence:
>1023_bases ATGGCCGCACCCAATCCCATCGATGGCTTCGAGATCGACCCAGCCGCGCTCACCTTTGTGGGCGAAGGATTGCAGCGGCC GGAGTGCATCCTCGCCGAGCCGGACGGCTCGCTGTGGAGCGCCGACGCGCGCGGTGGCGTGGTCCACATCCAGCCCGATG GCACGCAGGCCCTCATCAGCCAGCACCAGGCGGACAGCTTCGCCACCGCCACCGACGAGGAACAGCGCTTCGTCTCCGGC ACGCTTCCGAATGGCCTCGCCTTCGCCCGCAATGGCGACATCCTCATCTCCAATTTCGGCACCGACCGGCTGGAGGTGAT GACCCGCGACGGCGCCCTGCGCGTACTGGTGGAAGAGATCGACGGCGCGCCCATCGGCAAGGTCAATTTCGTGCTGCGCG ACAGCCGCGACCGCGTCTGGCTCACCATTTCCACGCGCATCAAGAACTGGATGAGCGCCATGAGCCCGAACGTGCGCGAC GGTTATGTGGCGCTCTATGACCAGGGCCGGCTGCGCGTGGTGGCGGACGGTTTCGGCTTCACCAACGAGATCCGCCTCGA TGCGCGGGAAGAGTGGCTTTACGTGGTGGAGACCTGCGGCCGGCGGATCACCCGCCTTCGGGTCGCGGAGGACGGCAGCC TCTCCCGTCGCGAGACCTTCGGCCCCTCGGATCACGGCGCCTTCATCGACGGCATCGCCTTCGACTCTTATGGCAACCTC TGGGGCACGCACGTGATGACGGACCGCCTGTTCGCCATCACGCCGGACGGCGACCTGCGTATCCTGCTGGACGATGACCG GAACAGCGCCGCCGGCCGCGCGCTGATGGAGGCCTTCGCGCAGGACAAGGCGACGCCCGAGCTGATGCTGGCCTGCGGCG GCACCATCGCCCCCTGGTTCGCCAGCCTCACCTTCGGCGGGCCGGACCTTCGCACCGGCTACATCGGCAGCCTGCGAGGC ACGCGCATCCCCACCTTCCGCGCGCCCGTCGCCGGCCTGCCCATGGCCCACTGGACCTCATGA
Upstream 100 bases:
>100_bases GTTTCTCCCGCCTGCAGGAGAAAGTTGAGAGGGGGCCACCGCCCCCTCTCAAGCGAGAGCATTCCGCGTCTAGGCTTCGA ACCACCGCCGAGGCATACCC
Downstream 100 bases:
>100_bases CCCTTTGAACACCACCGGCTTCAGCGGGCCGCCAGAGCCTGCCAGCCACATCGGGAGGACCCATATGAAACGCTACGTCA CGGGCGCCCTTGCTGCGCTC
Product: gluconolactonase
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE-Like Region Family; Strictosidine Synthase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAAPNPIDGFEIDPAALTFVGEGLQRPECILAEPDGSLWSADARGGVVHIQPDGTQALISQHQADSFATATDEEQRFVSG TLPNGLAFARNGDILISNFGTDRLEVMTRDGALRVLVEEIDGAPIGKVNFVLRDSRDRVWLTISTRIKNWMSAMSPNVRD GYVALYDQGRLRVVADGFGFTNEIRLDAREEWLYVVETCGRRITRLRVAEDGSLSRRETFGPSDHGAFIDGIAFDSYGNL WGTHVMTDRLFAITPDGDLRILLDDDRNSAAGRALMEAFAQDKATPELMLACGGTIAPWFASLTFGGPDLRTGYIGSLRG TRIPTFRAPVAGLPMAHWTS
Sequences:
>Translated_340_residues MAAPNPIDGFEIDPAALTFVGEGLQRPECILAEPDGSLWSADARGGVVHIQPDGTQALISQHQADSFATATDEEQRFVSG TLPNGLAFARNGDILISNFGTDRLEVMTRDGALRVLVEEIDGAPIGKVNFVLRDSRDRVWLTISTRIKNWMSAMSPNVRD GYVALYDQGRLRVVADGFGFTNEIRLDAREEWLYVVETCGRRITRLRVAEDGSLSRRETFGPSDHGAFIDGIAFDSYGNL WGTHVMTDRLFAITPDGDLRILLDDDRNSAAGRALMEAFAQDKATPELMLACGGTIAPWFASLTFGGPDLRTGYIGSLRG TRIPTFRAPVAGLPMAHWTS >Mature_339_residues AAPNPIDGFEIDPAALTFVGEGLQRPECILAEPDGSLWSADARGGVVHIQPDGTQALISQHQADSFATATDEEQRFVSGT LPNGLAFARNGDILISNFGTDRLEVMTRDGALRVLVEEIDGAPIGKVNFVLRDSRDRVWLTISTRIKNWMSAMSPNVRDG YVALYDQGRLRVVADGFGFTNEIRLDAREEWLYVVETCGRRITRLRVAEDGSLSRRETFGPSDHGAFIDGIAFDSYGNLW GTHVMTDRLFAITPDGDLRILLDDDRNSAAGRALMEAFAQDKATPELMLACGGTIAPWFASLTFGGPDLRTGYIGSLRGT RIPTFRAPVAGLPMAHWTS
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37136; Mature: 37005
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPNPIDGFEIDPAALTFVGEGLQRPECILAEPDGSLWSADARGGVVHIQPDGTQALIS CCCCCCCCCCEECHHHHEEECCCCCCCCEEEECCCCCEEECCCCCCEEEECCCCHHHHHH QHQADSFATATDEEQRFVSGTLPNGLAFARNGDILISNFGTDRLEVMTRDGALRVLVEEI HHCCCCCCCCCCCHHHEEECCCCCCEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEHH DGAPIGKVNFVLRDSRDRVWLTISTRIKNWMSAMSPNVRDGYVALYDQGRLRVVADGFGF CCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCC TNEIRLDAREEWLYVVETCGRRITRLRVAEDGSLSRRETFGPSDHGAFIDGIAFDSYGNL CEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCC WGTHVMTDRLFAITPDGDLRILLDDDRNSAAGRALMEAFAQDKATPELMLACGGTIAPWF CCHHEECCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH ASLTFGGPDLRTGYIGSLRGTRIPTFRAPVAGLPMAHWTS HHEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure AAPNPIDGFEIDPAALTFVGEGLQRPECILAEPDGSLWSADARGGVVHIQPDGTQALIS CCCCCCCCCEECHHHHEEECCCCCCCCEEEECCCCCEEECCCCCCEEEECCCCHHHHHH QHQADSFATATDEEQRFVSGTLPNGLAFARNGDILISNFGTDRLEVMTRDGALRVLVEEI HHCCCCCCCCCCCHHHEEECCCCCCEEEEECCCEEEEECCCCEEEEEECCCCEEEEEEHH DGAPIGKVNFVLRDSRDRVWLTISTRIKNWMSAMSPNVRDGYVALYDQGRLRVVADGFGF CCCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCC TNEIRLDAREEWLYVVETCGRRITRLRVAEDGSLSRRETFGPSDHGAFIDGIAFDSYGNL CEEEEECCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEEECCCCCC WGTHVMTDRLFAITPDGDLRILLDDDRNSAAGRALMEAFAQDKATPELMLACGGTIAPWF CCHHEECCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH ASLTFGGPDLRTGYIGSLRGTRIPTFRAPVAGLPMAHWTS HHEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA