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The map label for this gene is holA

Identifier: 158422193

GI number: 158422193

Start: 630843

End: 631856

Strand: Direct

Name: holA

Synonym: AZC_0569

Alternate gene names: NA

Gene position: 630843-631856 (Clockwise)

Preceding gene: 158422192

Following gene: 158422194

Centisome position: 11.75

GC content: 71.4

Gene sequence:

>1014_bases
ATGGTCGCGGTCCGCGCCGGCGATGCCGATACGGCGCTGGCGCGGCGCGATCCGCGCCACGCCGTCGTCCTGATCTTCGG
CCCCGACATGGGCCTCGTGCGCGAGCGCGCAGCGGGGCTGGTGAAGCGCGTGGTGCCCGATGTGGCCGACCCCTTCGCCG
TGGTGCGGCTGGAAGGGGATGAGCTTTCGGGCGATCCTCAGCGGCTCATCGACGAGACGCAGACCGTCGGCCTGTTCGGC
GGCGAACGCGTGGTCTGGGTGCGGGCGGGCTCGCGAAACTTCGTGCCGGCGCTGGAGCCGGTGCTGGAGGTGGGCGGCTC
GACGCTGGTGGTGGTGGAGGCAGGCGACCTCAAGAAGGGCGCGCCCCTGCGCACCCTGTGCGAGGCCTCCCCCAAGGCCC
TTGCCATTCCCTGTTATGCGGACGGCGACCGCGATCTCGGCAAGCTGGTGGACACCATGCTCTCAGAGGCGGGCCTTGCC
ATCGACCGCGACGCCAAGGAACTCCTCGTTTCCCTCATCGGCGGCGACCGCCTCGCCTCGCGCGGCGAGATCGCCAAGCT
CGCGCTCTATGCGCAGGGGCAGGGGCGGGTGACGCTTGAGGATGTGCGCGTCATCGTCGGCGATGCGTCCGCGCTGGCGC
TGGATGATGTGGTGGATTCCACCCTCGCCGGTCAGGCGGTGGAGGCGACCGCCGCGCTTGCCAAGGCCTGGGGCGCGGCG
ACCCGCCCCGACGCGGTGCTCGGTGCGCTGCTGCGGGCGCTCTCTTCGTTGCACCAGATGGCCCTTCAGGTACAGGCCGG
CACGCCGGCGGACCGGGTCATCGATCAGGCGCGGCCCATGGTGCATTTCTCCCGCAAGCCCAAGCTGGAGCGGGCGCTGC
GCAGCCTCAATGCCGAGCGGTGCCTCCGGGCCATCCTGCTTGTGGACGAGGCGGTGCTGGCCGCCCGCCGCAACGCCGGC
ATGGCGCAGGCCATCACCGAGCGTGTGGTGCTTCAACTCTCCGCCCGGCGGTAA

Upstream 100 bases:

>100_bases
GAGCAGATCCGCGCGCAGCTCGCCGCCTACTTCATCAACCCGCCGGCGCCCCCGGCGGCCCCCGCCGCGCCGGCGGCAAA
GCCCCCGGGCACCTGAGCCC

Downstream 100 bases:

>100_bases
TAGGATCACGCCGTCTCCAGCCGAAGGACGAGACGGTGATGGACTGGATATTGCCCAAGCGCCTCGACAACAGCTTCCCC
GGCCATCCGGCGGTGGTCTG

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MVAVRAGDADTALARRDPRHAVVLIFGPDMGLVRERAAGLVKRVVPDVADPFAVVRLEGDELSGDPQRLIDETQTVGLFG
GERVVWVRAGSRNFVPALEPVLEVGGSTLVVVEAGDLKKGAPLRTLCEASPKALAIPCYADGDRDLGKLVDTMLSEAGLA
IDRDAKELLVSLIGGDRLASRGEIAKLALYAQGQGRVTLEDVRVIVGDASALALDDVVDSTLAGQAVEATAALAKAWGAA
TRPDAVLGALLRALSSLHQMALQVQAGTPADRVIDQARPMVHFSRKPKLERALRSLNAERCLRAILLVDEAVLAARRNAG
MAQAITERVVLQLSARR

Sequences:

>Translated_337_residues
MVAVRAGDADTALARRDPRHAVVLIFGPDMGLVRERAAGLVKRVVPDVADPFAVVRLEGDELSGDPQRLIDETQTVGLFG
GERVVWVRAGSRNFVPALEPVLEVGGSTLVVVEAGDLKKGAPLRTLCEASPKALAIPCYADGDRDLGKLVDTMLSEAGLA
IDRDAKELLVSLIGGDRLASRGEIAKLALYAQGQGRVTLEDVRVIVGDASALALDDVVDSTLAGQAVEATAALAKAWGAA
TRPDAVLGALLRALSSLHQMALQVQAGTPADRVIDQARPMVHFSRKPKLERALRSLNAERCLRAILLVDEAVLAARRNAG
MAQAITERVVLQLSARR
>Mature_337_residues
MVAVRAGDADTALARRDPRHAVVLIFGPDMGLVRERAAGLVKRVVPDVADPFAVVRLEGDELSGDPQRLIDETQTVGLFG
GERVVWVRAGSRNFVPALEPVLEVGGSTLVVVEAGDLKKGAPLRTLCEASPKALAIPCYADGDRDLGKLVDTMLSEAGLA
IDRDAKELLVSLIGGDRLASRGEIAKLALYAQGQGRVTLEDVRVIVGDASALALDDVVDSTLAGQAVEATAALAKAWGAA
TRPDAVLGALLRALSSLHQMALQVQAGTPADRVIDQARPMVHFSRKPKLERALRSLNAERCLRAILLVDEAVLAARRNAG
MAQAITERVVLQLSARR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 35684; Mature: 35684

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVRAGDADTALARRDPRHAVVLIFGPDMGLVRERAAGLVKRVVPDVADPFAVVRLEGD
CEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
ELSGDPQRLIDETQTVGLFGGERVVWVRAGSRNFVPALEPVLEVGGSTLVVVEAGDLKKG
CCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
APLRTLCEASPKALAIPCYADGDRDLGKLVDTMLSEAGLAIDRDAKELLVSLIGGDRLAS
CCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHCC
RGEIAKLALYAQGQGRVTLEDVRVIVGDASALALDDVVDSTLAGQAVEATAALAKAWGAA
CCCEEEEEEEECCCCCEEHHHEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
TRPDAVLGALLRALSSLHQMALQVQAGTPADRVIDQARPMVHFSRKPKLERALRSLNAER
CCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHCCCCCCHHHHHHHHCCHHH
CLRAILLVDEAVLAARRNAGMAQAITERVVLQLSARR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVAVRAGDADTALARRDPRHAVVLIFGPDMGLVRERAAGLVKRVVPDVADPFAVVRLEGD
CEEEECCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
ELSGDPQRLIDETQTVGLFGGERVVWVRAGSRNFVPALEPVLEVGGSTLVVVEAGDLKKG
CCCCCHHHHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCC
APLRTLCEASPKALAIPCYADGDRDLGKLVDTMLSEAGLAIDRDAKELLVSLIGGDRLAS
CCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHCC
RGEIAKLALYAQGQGRVTLEDVRVIVGDASALALDDVVDSTLAGQAVEATAALAKAWGAA
CCCEEEEEEEECCCCCEEHHHEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
TRPDAVLGALLRALSSLHQMALQVQAGTPADRVIDQARPMVHFSRKPKLERALRSLNAER
CCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCCCHHCCCCCCHHHHHHHHCCHHH
CLRAILLVDEAVLAARRNAGMAQAITERVVLQLSARR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA