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The map label for this gene is yfkM [H]

Identifier: 158422181

GI number: 158422181

Start: 617458

End: 618030

Strand: Reverse

Name: yfkM [H]

Synonym: AZC_0557

Alternate gene names: 158422181

Gene position: 618030-617458 (Counterclockwise)

Preceding gene: 158422185

Following gene: 158422180

Centisome position: 11.51

GC content: 65.79

Gene sequence:

>573_bases
ATGGCCAATCGTCTCGATGGACGCAAGGTCGCCGTCCTCGTCGCCGACGGGTTCGAACAGGTGGAACTCACCGAGCCGGT
GAAGGCCCTGAAGGAGGCCGGCGCGCAGGTGAAGATCGTGAGCCCCATGAAGGGCCAGGTGCAGGGCGTCAACCACGACA
AGAAAGGCGACGCCATCCCCGTGGACCAGCCGCTGGACGGCGCCAATGCGGGTGATTTCGACGCGCTGCTGCTGCCCGGC
GGCGTCATGAATCCGGACACGCTGCGCATCAATGACAAGGCTATCGCCTTCACCCGCGCCTTCTTCGAGGCCGGCAAGCC
GGTCGCGGCCATCTGCCATGGCCCGCAGCTGCTGATTTCCGCAGGCCTCGTGAAGGGACGCAAGATGACCGGCTACAGCG
CCATCCAGGTGGACCTCGCCAATGCGGGCGCGCAGGTGTCGGACACCGAGGTCATCGTGGATCAGGGCCTCGTGACCAGC
CGCAACCCGAAGGACATTCCCGCCTTCAATGCCAAGATGGTGGAGGAGTTCGCGGAAGGGCGTCATCGCGGCCAGCGGGT
CGCGGCGGAATAG

Upstream 100 bases:

>100_bases
CTCGTGTTGTCCGGGTGAGCTGGGGGCTTCCGGGCGCGCCGCATGAACGGGCCGCGCCCCGAACCGATACCATCCCGACA
CAGGAAAAAGGAGAGACCCC

Downstream 100 bases:

>100_bases
CCCCGCGACGGTCTGGCATACAACCATACGACACGCCCCGGTCCCAAAGACCGGGGCGCATTGTTTGCGGTATATTTTTG
GCCGTTTTTCAGAAGCTGTC

Product: proteinase I

Products: NA

Alternate protein names: GSP18 [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MANRLDGRKVAVLVADGFEQVELTEPVKALKEAGAQVKIVSPMKGQVQGVNHDKKGDAIPVDQPLDGANAGDFDALLLPG
GVMNPDTLRINDKAIAFTRAFFEAGKPVAAICHGPQLLISAGLVKGRKMTGYSAIQVDLANAGAQVSDTEVIVDQGLVTS
RNPKDIPAFNAKMVEEFAEGRHRGQRVAAE

Sequences:

>Translated_190_residues
MANRLDGRKVAVLVADGFEQVELTEPVKALKEAGAQVKIVSPMKGQVQGVNHDKKGDAIPVDQPLDGANAGDFDALLLPG
GVMNPDTLRINDKAIAFTRAFFEAGKPVAAICHGPQLLISAGLVKGRKMTGYSAIQVDLANAGAQVSDTEVIVDQGLVTS
RNPKDIPAFNAKMVEEFAEGRHRGQRVAAE
>Mature_189_residues
ANRLDGRKVAVLVADGFEQVELTEPVKALKEAGAQVKIVSPMKGQVQGVNHDKKGDAIPVDQPLDGANAGDFDALLLPGG
VMNPDTLRINDKAIAFTRAFFEAGKPVAAICHGPQLLISAGLVKGRKMTGYSAIQVDLANAGAQVSDTEVIVDQGLVTSR
NPKDIPAFNAKMVEEFAEGRHRGQRVAAE

Specific function: Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=167, Percent_Identity=48.502994011976, Blast_Score=153, Evalue=7e-39,
Organism=Drosophila melanogaster, GI28571932, Length=177, Percent_Identity=29.3785310734463, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20081; Mature: 19950

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANRLDGRKVAVLVADGFEQVELTEPVKALKEAGAQVKIVSPMKGQVQGVNHDKKGDAIP
CCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCC
VDQPLDGANAGDFDALLLPGGVMNPDTLRINDKAIAFTRAFFEAGKPVAAICHGPQLLIS
CCCCCCCCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHH
AGLVKGRKMTGYSAIQVDLANAGAQVSDTEVIVDQGLVTSRNPKDIPAFNAKMVEEFAEG
HHHHCCCEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
RHRGQRVAAE
HHHCCCCCCC
>Mature Secondary Structure 
ANRLDGRKVAVLVADGFEQVELTEPVKALKEAGAQVKIVSPMKGQVQGVNHDKKGDAIP
CCCCCCCEEEEEEECCCCEEEHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCCCCC
VDQPLDGANAGDFDALLLPGGVMNPDTLRINDKAIAFTRAFFEAGKPVAAICHGPQLLIS
CCCCCCCCCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHH
AGLVKGRKMTGYSAIQVDLANAGAQVSDTEVIVDQGLVTSRNPKDIPAFNAKMVEEFAEG
HHHHCCCEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
RHRGQRVAAE
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 9298659 [H]