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The map label for this gene is omp16 [H]

Identifier: 158422149

GI number: 158422149

Start: 580582

End: 581076

Strand: Direct

Name: omp16 [H]

Synonym: AZC_0525

Alternate gene names: 158422149

Gene position: 580582-581076 (Clockwise)

Preceding gene: 158422148

Following gene: 158422150

Centisome position: 10.81

GC content: 66.46

Gene sequence:

>495_bases
ATGCTTCATTTGGGTTTTGCGCGCGGCTTCCGGTTCGCCGCCATGATCGGTGTGATGCTGGCGCTCGCCGCCTGCGCCAA
CAATCCGAACGCCAATGGCGGGGCTGGCATGAACGGGGCCGGCGGCCCTCCCGGTTCGCCGCAGGAGTTCGTCGTCTCCG
TGGGCGACCGTGTCTTCTTCGACACCGACCAGACCGACCTTTCGCCCGAGGCGCGCGCCATTCTGGACCGCCAGGCGCAG
TGGCTGCAGCAGTATAACCGCTACACCTTCACCATCGAAGGCCATGCGGACGAGCGCGGCACCCGCGAATACAACATCGC
GCTCGGCGCCAAGCGCGCCCAGAACGTGCGCGACTATCTCGCCTCGCGCGGCATCGATCCGGCCCGCATGCGGACCATCT
CCTACGGCAAGGAACGGCCGGTTGCTGTCTGCAACGACATCTCCTGCTGGTCGCAGAACCGCCGCGCCGTCACCGTGCTC
AATCCGACGAGCTGA

Upstream 100 bases:

>100_bases
AGCACGTCAGGCTTTGATGAGAGCGGATGGCCGCGCCCCGGCGCCGAGGTCAGGCTCTTAACGTTACCATCCGGGTTGAG
TCACGAAGGGAGACACCGGA

Downstream 100 bases:

>100_bases
GGCTTGGTCACAAAAAGAATGTCTCTGCCCCCGCCGAGGCATTCCTAAGTTACCTGCGTTTCGTGCTAGAGAGCCGGCGT
CCTCCACGCCGGCTCTTTTG

Product: OmpA/MotB precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLHLGFARGFRFAAMIGVMLALAACANNPNANGGAGMNGAGGPPGSPQEFVVSVGDRVFFDTDQTDLSPEARAILDRQAQ
WLQQYNRYTFTIEGHADERGTREYNIALGAKRAQNVRDYLASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVL
NPTS

Sequences:

>Translated_164_residues
MLHLGFARGFRFAAMIGVMLALAACANNPNANGGAGMNGAGGPPGSPQEFVVSVGDRVFFDTDQTDLSPEARAILDRQAQ
WLQQYNRYTFTIEGHADERGTREYNIALGAKRAQNVRDYLASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVL
NPTS
>Mature_164_residues
MLHLGFARGFRFAAMIGVMLALAACANNPNANGGAGMNGAGGPPGSPQEFVVSVGDRVFFDTDQTDLSPEARAILDRQAQ
WLQQYNRYTFTIEGHADERGTREYNIALGAKRAQNVRDYLASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVL
NPTS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=157, Percent_Identity=37.5796178343949, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI48994946, Length=117, Percent_Identity=28.2051282051282, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17925; Mature: 17925

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLGFARGFRFAAMIGVMLALAACANNPNANGGAGMNGAGGPPGSPQEFVVSVGDRVFF
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEE
DTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADERGTREYNIALGAKRAQNVRDYL
ECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHH
ASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLNPTS
HHCCCCHHHHHHHHCCCCCCEEEECCCHHCCCCCCEEEEECCCC
>Mature Secondary Structure
MLHLGFARGFRFAAMIGVMLALAACANNPNANGGAGMNGAGGPPGSPQEFVVSVGDRVFF
CEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEE
DTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADERGTREYNIALGAKRAQNVRDYL
ECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHH
ASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVLNPTS
HHCCCCHHHHHHHHCCCCCCEEEECCCHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]