| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is livJ [C]
Identifier: 158422101
GI number: 158422101
Start: 534316
End: 535491
Strand: Reverse
Name: livJ [C]
Synonym: AZC_0477
Alternate gene names: 158422101
Gene position: 535491-534316 (Counterclockwise)
Preceding gene: 158422102
Following gene: 158422100
Centisome position: 9.97
GC content: 65.31
Gene sequence:
>1176_bases ATGAAGAAGTCGCTGGTTTTCGGTGCAACGCTTCTCGCAGCCGTCTCGGCGGCCGCCATGGCCCGCGCGGCCGACGATGA GCTGGTGCTCGGTTACATGATGGCCAAGAGCGGCCCTTATGTGAGCCTCGCCAACACCAACGAGATCGCGGTCGATCTCG CTGTGGAGGAGATCAACGCCAAGGGCGGGATCAACGGCAAGAAGATCAAGGTGGTGAAGTTCGACACCGCCGGCGATCCC AAGCAGGCCACCACCGCGCTCCGCCGCTTTGCGGAGGACGATTCCGCGCTCGCCGTCATCGGCCCGTTCTCCTCCTCCGA GGTGCGCACCACCTTCCCCGTGGGCGAGCGCTCCGGCATCGCGCAGATGTCCATGGCCTCCTCGGCCCCCGGCCTCACCA AGGGCTTCTCCTACGGCTTCCGCAACACCACGGACGAGGGCATCGTCCTCGACCAGGTAATGACGTCCATCAAGGACAAG AAGCTGCCCGCCGCTTCCGGTGCCGCCGCCTATGCCACGGACGACGTGGTGTCGAAGTCCATCGGCACCCTCGTGGTGCC CAAGCTGTTCGAGAAGTATTCCGTGCCCATGAAGGGCTCGGTGGACTTCCAGCTCGCCGCCTTCGACCTCTCCCCGCAGG TTTCCAAGCTTAAGGAGATGGCCCCCGACATCGTCGGCCTCGGCTCGCCGCCGGAAGGCGCGGTGAACCTCGCCAAGGAG CTGAAGCGCCAGGGCGTCTCCACCCGCGTCATCGGCGGCACCACCATCGCCGATCCCGAACTGCCCAAGCGCATGGACGG CGCGGGCGAGAACCTCACCATCGGCACCACCTTCTTCCCCGAGGTGAACGACAAGACCAAGGCCTTCGCCGCCGAATTCG GCAAGCGCACCAAGGCCGCCGGCCTGCCGCGCACCGAGCCGAACCAGATGGACGCCGCCGTCTATGACATCGTCTATCTC TATGCAGAGGCGATGAAGCGCGCCGCCGTGACCGGGGACAAGGCCAAGCTCGTGGCCGAGCGCACGGGCGTGCGCGACGC GCTCGCCAAGATGAAGGATTTCGAGGCCCTCGAGGGCAAGATCTCCTTCCGTGACGGCGATGCGGTGAAGCCGGTCTACA TTCTCGAGGTCAAGGGCGGAAAGTGGACCTTGCTGGACACCCGCATGCCTGAATAA
Upstream 100 bases:
>100_bases ATCCGCGCCTGCAGGAAGCCTATCTCGGCGAGGGCAGCCACGCCCAAGCCCAACACGCGTAAACGCGCTGACGATCATCT TTTCAGAAGGAGCCCGGTTC
Downstream 100 bases:
>100_bases GGCATACGGGCGGGACCGGCAGCGCCCTCTCTCCCCTTGCTGCCGGTCCCACTTCTTTTTCCGCGTACTCAGGAAGCGAA CATGACGGGCACCGCCCTCA
Product: ABC transporter periplasmic protein
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKKSLVFGATLLAAVSAAAMARAADDELVLGYMMAKSGPYVSLANTNEIAVDLAVEEINAKGGINGKKIKVVKFDTAGDP KQATTALRRFAEDDSALAVIGPFSSSEVRTTFPVGERSGIAQMSMASSAPGLTKGFSYGFRNTTDEGIVLDQVMTSIKDK KLPAASGAAAYATDDVVSKSIGTLVVPKLFEKYSVPMKGSVDFQLAAFDLSPQVSKLKEMAPDIVGLGSPPEGAVNLAKE LKRQGVSTRVIGGTTIADPELPKRMDGAGENLTIGTTFFPEVNDKTKAFAAEFGKRTKAAGLPRTEPNQMDAAVYDIVYL YAEAMKRAAVTGDKAKLVAERTGVRDALAKMKDFEALEGKISFRDGDAVKPVYILEVKGGKWTLLDTRMPE
Sequences:
>Translated_391_residues MKKSLVFGATLLAAVSAAAMARAADDELVLGYMMAKSGPYVSLANTNEIAVDLAVEEINAKGGINGKKIKVVKFDTAGDP KQATTALRRFAEDDSALAVIGPFSSSEVRTTFPVGERSGIAQMSMASSAPGLTKGFSYGFRNTTDEGIVLDQVMTSIKDK KLPAASGAAAYATDDVVSKSIGTLVVPKLFEKYSVPMKGSVDFQLAAFDLSPQVSKLKEMAPDIVGLGSPPEGAVNLAKE LKRQGVSTRVIGGTTIADPELPKRMDGAGENLTIGTTFFPEVNDKTKAFAAEFGKRTKAAGLPRTEPNQMDAAVYDIVYL YAEAMKRAAVTGDKAKLVAERTGVRDALAKMKDFEALEGKISFRDGDAVKPVYILEVKGGKWTLLDTRMPE >Mature_391_residues MKKSLVFGATLLAAVSAAAMARAADDELVLGYMMAKSGPYVSLANTNEIAVDLAVEEINAKGGINGKKIKVVKFDTAGDP KQATTALRRFAEDDSALAVIGPFSSSEVRTTFPVGERSGIAQMSMASSAPGLTKGFSYGFRNTTDEGIVLDQVMTSIKDK KLPAASGAAAYATDDVVSKSIGTLVVPKLFEKYSVPMKGSVDFQLAAFDLSPQVSKLKEMAPDIVGLGSPPEGAVNLAKE LKRQGVSTRVIGGTTIADPELPKRMDGAGENLTIGTTFFPEVNDKTKAFAAEFGKRTKAAGLPRTEPNQMDAAVYDIVYL YAEAMKRAAVTGDKAKLVAERTGVRDALAKMKDFEALEGKISFRDGDAVKPVYILEVKGGKWTLLDTRMPE
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=279, Percent_Identity=26.1648745519713, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789867, Length=140, Percent_Identity=32.8571428571429, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 41483; Mature: 41483
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLVFGATLLAAVSAAAMARAADDELVLGYMMAKSGPYVSLANTNEIAVDLAVEEINA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEECCC KGGINGKKIKVVKFDTAGDPKQATTALRRFAEDDSALAVIGPFSSSEVRTTFPVGERSGI CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC AQMSMASSAPGLTKGFSYGFRNTTDEGIVLDQVMTSIKDKKLPAASGAAAYATDDVVSKS HHHHHHCCCCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH IGTLVVPKLFEKYSVPMKGSVDFQLAAFDLSPQVSKLKEMAPDIVGLGSPPEGAVNLAKE HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHEECCCCCHHHHHHHHH LKRQGVSTRVIGGTTIADPELPKRMDGAGENLTIGTTFFPEVNDKTKAFAAEFGKRTKAA HHHCCCCEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHC GLPRTEPNQMDAAVYDIVYLYAEAMKRAAVTGDKAKLVAERTGVRDALAKMKDFEALEGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCE ISFRDGDAVKPVYILEVKGGKWTLLDTRMPE EEECCCCCCCCEEEEEECCCEEEEECCCCCC >Mature Secondary Structure MKKSLVFGATLLAAVSAAAMARAADDELVLGYMMAKSGPYVSLANTNEIAVDLAVEEINA CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEECCC KGGINGKKIKVVKFDTAGDPKQATTALRRFAEDDSALAVIGPFSSSEVRTTFPVGERSGI CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCC AQMSMASSAPGLTKGFSYGFRNTTDEGIVLDQVMTSIKDKKLPAASGAAAYATDDVVSKS HHHHHHCCCCCCHHCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH IGTLVVPKLFEKYSVPMKGSVDFQLAAFDLSPQVSKLKEMAPDIVGLGSPPEGAVNLAKE HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHCCHHEECCCCCHHHHHHHHH LKRQGVSTRVIGGTTIADPELPKRMDGAGENLTIGTTFFPEVNDKTKAFAAEFGKRTKAA HHHCCCCEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHC GLPRTEPNQMDAAVYDIVYLYAEAMKRAAVTGDKAKLVAERTGVRDALAKMKDFEALEGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCE ISFRDGDAVKPVYILEVKGGKWTLLDTRMPE EEECCCCCCCCEEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA