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The map label for this gene is gntR [H]

Identifier: 158422091

GI number: 158422091

Start: 522936

End: 523727

Strand: Direct

Name: gntR [H]

Synonym: AZC_0467

Alternate gene names: 158422091

Gene position: 522936-523727 (Clockwise)

Preceding gene: 158422090

Following gene: 158422092

Centisome position: 9.74

GC content: 64.52

Gene sequence:

>792_bases
TTGCGTGCTCTGCTAGCATACAGTACACAGTATTTCACCGACGGCATACGCCCGACAGAAGGCGCCGCCACAGGGAAGGG
AACAGGGCTCGTGGATCAGGTCGCAGACACGCCCAAGCTCAATGTCGAACCCCTCGGGGCGAGTTCGAGCCTGCGCGCCT
TGGCCTATGATGCTCTTAAGCGGGCCATTACGGAAATGGACATTTACGGCAGCAACACCGATATCCGGCTGGACGAGCGT
CAGCTCTCCGAGGATCTCGGCGTGAGCCGGACCCCCATCCGCGAAGCCATGACTGTGCTGGAGCAAGAAGGCTTCGTGCG
GTCTGTCCCCCGGCGGGGCATCTTCGTGGTGCGCAAGACCAAGCGCCAGCTGGTGGAAATGATCACCGTCTGGGCGGCGC
TGGAAAGCATGGCGGCGCGCCTCGCCGCGACCCGTGCGACGGCGGCGGACCTCGCGTCCCTGCGCAGGCTCTTCAACGAT
TTCGAGGCCGAGCGCCCGGCCGCGCACGTGCCCGAATATTCCAAGGCGAACATCGCCTTCCATCAGGCCATCATCCGCAT
GGGCGGCAGCGCGCTCATCGTGGACATGACCGAGAACCTGTTCCTGCACATGCGGGCCATTCGCACGGTCTCCATCCAGC
AGGACAACCGCTCCGACGTCTCCATGCAGGAGCACATGGCCATCATCGATGCGCTCGAGGCGCGCGACCCCGAGCGCGCC
GAGCGCCTGGTGCGCGAGCACACGATGGCGCTCGCCGCTCTCGTGGAGAAGCACGGCCAGTTTCCAGAATAG

Upstream 100 bases:

>100_bases
AGGCTGTGATGGCCTCAGCCGGGCGGCCCCGATCCCCGCAACTGCCCGTCCCCGCTGGATTTTTGCTGCACCGCGCAATT
TTTTCCGCGGCGCCCAGGGA

Downstream 100 bases:

>100_bases
AGGCCGTTGCGGCCTTTGACGGTCCGCCGGTCCGCCGGCGCCCGACGCTTTGAGATCGCTTTTAGCCGGTATCCGAAGAA
CATCCGGGAGGACGCGGAAT

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRALLAYSTQYFTDGIRPTEGAATGKGTGLVDQVADTPKLNVEPLGASSSLRALAYDALKRAITEMDIYGSNTDIRLDER
QLSEDLGVSRTPIREAMTVLEQEGFVRSVPRRGIFVVRKTKRQLVEMITVWAALESMAARLAATRATAADLASLRRLFND
FEAERPAAHVPEYSKANIAFHQAIIRMGGSALIVDMTENLFLHMRAIRTVSIQQDNRSDVSMQEHMAIIDALEARDPERA
ERLVREHTMALAALVEKHGQFPE

Sequences:

>Translated_263_residues
MRALLAYSTQYFTDGIRPTEGAATGKGTGLVDQVADTPKLNVEPLGASSSLRALAYDALKRAITEMDIYGSNTDIRLDER
QLSEDLGVSRTPIREAMTVLEQEGFVRSVPRRGIFVVRKTKRQLVEMITVWAALESMAARLAATRATAADLASLRRLFND
FEAERPAAHVPEYSKANIAFHQAIIRMGGSALIVDMTENLFLHMRAIRTVSIQQDNRSDVSMQEHMAIIDALEARDPERA
ERLVREHTMALAALVEKHGQFPE
>Mature_263_residues
MRALLAYSTQYFTDGIRPTEGAATGKGTGLVDQVADTPKLNVEPLGASSSLRALAYDALKRAITEMDIYGSNTDIRLDER
QLSEDLGVSRTPIREAMTVLEQEGFVRSVPRRGIFVVRKTKRQLVEMITVWAALESMAARLAATRATAADLASLRRLFND
FEAERPAAHVPEYSKANIAFHQAIIRMGGSALIVDMTENLFLHMRAIRTVSIQQDNRSDVSMQEHMAIIDALEARDPERA
ERLVREHTMALAALVEKHGQFPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=213, Percent_Identity=23.943661971831, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000485
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 29237; Mature: 29237

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLAYSTQYFTDGIRPTEGAATGKGTGLVDQVADTPKLNVEPLGASSSLRALAYDALK
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RAITEMDIYGSNTDIRLDERQLSEDLGVSRTPIREAMTVLEQEGFVRSVPRRGIFVVRKT
HHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEHHH
KRQLVEMITVWAALESMAARLAATRATAADLASLRRLFNDFEAERPAAHVPEYSKANIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
HQAIIRMGGSALIVDMTENLFLHMRAIRTVSIQQDNRSDVSMQEHMAIIDALEARDPERA
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCHHHH
ERLVREHTMALAALVEKHGQFPE
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRALLAYSTQYFTDGIRPTEGAATGKGTGLVDQVADTPKLNVEPLGASSSLRALAYDALK
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
RAITEMDIYGSNTDIRLDERQLSEDLGVSRTPIREAMTVLEQEGFVRSVPRRGIFVVRKT
HHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEHHH
KRQLVEMITVWAALESMAARLAATRATAADLASLRRLFNDFEAERPAAHVPEYSKANIAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
HQAIIRMGGSALIVDMTENLFLHMRAIRTVSIQQDNRSDVSMQEHMAIIDALEARDPERA
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCHHHH
ERLVREHTMALAALVEKHGQFPE
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]