| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is bugT [H]
Identifier: 158422090
GI number: 158422090
Start: 521601
End: 522755
Strand: Direct
Name: bugT [H]
Synonym: AZC_0466
Alternate gene names: 158422090
Gene position: 521601-522755 (Clockwise)
Preceding gene: 158422089
Following gene: 158422091
Centisome position: 9.71
GC content: 67.1
Gene sequence:
>1155_bases TTGGCAGTAAAGGGCGCGCCCGCGGGCGTTGCATCCCGTGGAGGGGAGCGTTTAGGCTTCCGGGCGGCCATCGGAGAGGT TTTCCGGCGGCCTGCGATCCGCCCCGGACAGAGGGTGGACGTGACCGGGAGGAAAAGCCGAATGTCCCGCGCTCTCATGC GTCGTCTCCACCGATGGTCCCTGGGCGCGCTCGCCGCACTCTGTCTTGCGCCCGCGGCGGCTCAGGCCTGGCAGCCGACG AAGACCGTGGAACTGGTGGTGCCGGCGGGCGTCGGCGGCGGCGCCGACCAGATGGCGCGGGTCATTCAGGGAATCATCCA GAAGCATGGCCTGATGGCGCAGCCCCTGGTGGTGGTGAACCGTCCGGGCGGGGCGGGCGCGCAGGGCTTCCTGGAGATGA AGGGCGCAGCGGGCGACCCCCACAAGATCCTGATCAGCCTGTCCAACGTCTTCACCACACCGCTCGCCACCGGCGCGCCC TTCCGCTGGGACGAACTGACCCCGGTGGCCATGCTGGCGCTGGACGAGTTCATCCTCTGGGTGAACGCCAAGGCGTCCTA CAGCGACGTGGCGGGCTTTGTCGCCGCCCTCAAGGCGGCACCCCCCGGTGCCGAATTCAAGATGGGCGGCACCGGCTCCA AGCAGGAAGACCAGATCATCACCGCCGCCATCGAGCAGAAGACCGGTGGCCGCTTCATCTACGTGCCCTACAAGGGCGGT GGAGACGTGGCGACCCAGCTGGTGAAGGGGCAGATCACCGCGTCCGTGAACAATCCCATCGAGGCTGTGACGCAGTGGCG GGCCGGCGAGGTGAGACCGCTCTGCGTCTTCGACGACGAGCGCCTGCCCTATAAGGAGCCCGTGGTCGGCCAGACCTCGT GGGCCGATATCGCCACCTGCAAGGAGGCCGGTCTCGATATCGAATATCTGATGCTGCGCGGCATCTTCGGCCCGCCGCGC CTGACCGCCGATCAGGTCGGTTATTATGTGGAACTGTTCCGCCGGGTGCGCGAGACGCCCGAGTGGAAGGAGTTCATGCA GCGCGGCGCTTTCAACACGAGCGCCCTCACCGGCAATGATTACAAGACCTGGCTCAGCAAGGCGGCGGACAGCCACCGCT CGCTGATGGAAACCGCCGGCTTCATCGTCCGCTGA
Upstream 100 bases:
>100_bases CGACATATCGCTGACTATGTGCTCAACGGTCATTGATGCTCTCGGCCGTTACATCGTCTTTTCCTGTGGGCACGGTTCAA TCCCACCGTTCTTTTGACGA
Downstream 100 bases:
>100_bases GGCGTCGGCCGCATTCGGCCTCTCTGAAACAATTGCCCACGTTCAGAGGCATCTAGGGGAGGGGCCGCGGGTCCCTCCCG AGGCTGTGATGGCCTCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MAVKGAPAGVASRGGERLGFRAAIGEVFRRPAIRPGQRVDVTGRKSRMSRALMRRLHRWSLGALAALCLAPAAAQAWQPT KTVELVVPAGVGGGADQMARVIQGIIQKHGLMAQPLVVVNRPGGAGAQGFLEMKGAAGDPHKILISLSNVFTTPLATGAP FRWDELTPVAMLALDEFILWVNAKASYSDVAGFVAALKAAPPGAEFKMGGTGSKQEDQIITAAIEQKTGGRFIYVPYKGG GDVATQLVKGQITASVNNPIEAVTQWRAGEVRPLCVFDDERLPYKEPVVGQTSWADIATCKEAGLDIEYLMLRGIFGPPR LTADQVGYYVELFRRVRETPEWKEFMQRGAFNTSALTGNDYKTWLSKAADSHRSLMETAGFIVR
Sequences:
>Translated_384_residues MAVKGAPAGVASRGGERLGFRAAIGEVFRRPAIRPGQRVDVTGRKSRMSRALMRRLHRWSLGALAALCLAPAAAQAWQPT KTVELVVPAGVGGGADQMARVIQGIIQKHGLMAQPLVVVNRPGGAGAQGFLEMKGAAGDPHKILISLSNVFTTPLATGAP FRWDELTPVAMLALDEFILWVNAKASYSDVAGFVAALKAAPPGAEFKMGGTGSKQEDQIITAAIEQKTGGRFIYVPYKGG GDVATQLVKGQITASVNNPIEAVTQWRAGEVRPLCVFDDERLPYKEPVVGQTSWADIATCKEAGLDIEYLMLRGIFGPPR LTADQVGYYVELFRRVRETPEWKEFMQRGAFNTSALTGNDYKTWLSKAADSHRSLMETAGFIVR >Mature_383_residues AVKGAPAGVASRGGERLGFRAAIGEVFRRPAIRPGQRVDVTGRKSRMSRALMRRLHRWSLGALAALCLAPAAAQAWQPTK TVELVVPAGVGGGADQMARVIQGIIQKHGLMAQPLVVVNRPGGAGAQGFLEMKGAAGDPHKILISLSNVFTTPLATGAPF RWDELTPVAMLALDEFILWVNAKASYSDVAGFVAALKAAPPGAEFKMGGTGSKQEDQIITAAIEQKTGGRFIYVPYKGGG DVATQLVKGQITASVNNPIEAVTQWRAGEVRPLCVFDDERLPYKEPVVGQTSWADIATCKEAGLDIEYLMLRGIFGPPRL TADQVGYYVELFRRVRETPEWKEFMQRGAFNTSALTGNDYKTWLSKAADSHRSLMETAGFIVR
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 41380; Mature: 41249
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKGAPAGVASRGGERLGFRAAIGEVFRRPAIRPGQRVDVTGRKSRMSRALMRRLHRWS CCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCC LGALAALCLAPAAAQAWQPTKTVELVVPAGVGGGADQMARVIQGIIQKHGLMAQPLVVVN HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE RPGGAGAQGFLEMKGAAGDPHKILISLSNVFTTPLATGAPFRWDELTPVAMLALDEFILW CCCCCCCCCEEEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEE VNAKASYSDVAGFVAALKAAPPGAEFKMGGTGSKQEDQIITAAIEQKTGGRFIYVPYKGG EECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCC GDVATQLVKGQITASVNNPIEAVTQWRAGEVRPLCVFDDERLPYKEPVVGQTSWADIATC CHHHHHHHHCEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH KEAGLDIEYLMLRGIFGPPRLTADQVGYYVELFRRVRETPEWKEFMQRGAFNTSALTGND HHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH YKTWLSKAADSHRSLMETAGFIVR HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVKGAPAGVASRGGERLGFRAAIGEVFRRPAIRPGQRVDVTGRKSRMSRALMRRLHRWS CCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHCC LGALAALCLAPAAAQAWQPTKTVELVVPAGVGGGADQMARVIQGIIQKHGLMAQPLVVVN HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE RPGGAGAQGFLEMKGAAGDPHKILISLSNVFTTPLATGAPFRWDELTPVAMLALDEFILW CCCCCCCCCEEEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEE VNAKASYSDVAGFVAALKAAPPGAEFKMGGTGSKQEDQIITAAIEQKTGGRFIYVPYKGG EECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCC GDVATQLVKGQITASVNNPIEAVTQWRAGEVRPLCVFDDERLPYKEPVVGQTSWADIATC CHHHHHHHHCEEEECCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHH KEAGLDIEYLMLRGIFGPPRLTADQVGYYVELFRRVRETPEWKEFMQRGAFNTSALTGND HHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCH YKTWLSKAADSHRSLMETAGFIVR HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11111902; 12910271; 2873570 [H]