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The map label for this gene is ycbK [H]

Identifier: 158422064

GI number: 158422064

Start: 495545

End: 497101

Strand: Direct

Name: ycbK [H]

Synonym: AZC_0440

Alternate gene names: 158422064

Gene position: 495545-497101 (Clockwise)

Preceding gene: 158422063

Following gene: 158422067

Centisome position: 9.23

GC content: 71.8

Gene sequence:

>1557_bases
TTGCCGAACAAGAACAACACTCGCCTTCCGCTTCGCATCTGGACGTCGGACCGGAGCGGCATCGCGCTCTCGCCCTCCGT
GCGGCGGACCGCCCGTTCGCTGGCGGTGGCGGCGACCCTCTTCCTGTGCGGCACCGGCACGTTGCAGAACGCCGTCGCGA
ACGGCGACACGCGCACGCTCACCTTCACGAATCCCCACACGGGCGAAGCCGGCTCCTTCACCTTCAAGAAGGACGGCCGC
TACGACCCGGAAGTGCTGAAGCAGCTTAACTGGCTCGCGCGCGACTGGCGCAAGGATGAGCCCATCGAGATGGACCCCCA
TCTCTTTGACCTCCTCTGGGAGGTCTATCGGGAGGTCGGGGCAACCGCGCCCATCACCCTCCTGTGCGGCTACCGCTCGC
CCTCCACCAATGCGATGCTCCGCTCCCGCAGCAAGGCGGTGGCCGAGACCAGCCAGCACATGCGCGGCAGGGCGATGGAC
TTCTACATCCCCGGCGTGCGCCTCGCGGAACTGCGCGAGACCGGCCTGCGGCTCCAGCGCGGCGGCGTCGGCTTCTATCC
GTCGCAGAACTTCGTCCATATGGACACCGGCGGCGTGCGCATGTGGCCGCGCATGAGCCGCGAGGAACTGGCCCGCGTCT
TCCCGGATGGCAAGACCGTGCTCATTCCCACCGACGGCAAGCCCATGTCCGGCTACCAGCTGGCGCTGGCGGAACTGGAA
GCGCGTGGCAGCGTCGCCTCCGACGCGCCGCAGGCCGACGGCTTCAAGGGCATCCGCAATTTCTTCGCCTCCCTGTTCGG
CAAGCCGGCGCCGGAGGAAAGCGACGCGGGCGAAGTGGAAGGCGTGCAGCCCGAGCGCGCGCCGCGCGCCACCCAGGTGG
CGAGCGCGGCCCCGTCCCGTGCCGCGACCCCGGCTCCGGCGCCCGCCGCTTCTGCGCCTCTGCCGCCGCCGCAGGCCTCC
CGTCCGGTCGTGACCGCCGTTTCCACAACGCCGCTGCCCTCCGCCCGTCCGGCCGAGATCGCCGCCGCCGCCATGCTCAC
CGCCCACGCCACCAACGCGCCCTTTGCGCCGCTGCCCATCAAGCGGCCGCAGGCGCCGACGCAGGTGGCGAGCCTGGAAC
CGGCCGGCGCGCCGGTGCCGTTGCCCGCCGTCATCATGCGCGGCACCAGCGAGCGCAGCGAGATCATGGGGCCGCCGCCC
TCCACCGCGCTCGGCTATGCCGCCGGCGGCGACATCGCGTCGGCCCTGCCGCCCAATCCCGCCATCGCCGCCGCGCCCCA
GCCGCGCCTGCGCGGTTCGAGCCGCACGGCTGCGGACATCCCGTTCGGCCGCGTGTTCCGCGGTCCGGGCCTGTGGGGCG
AGGCCTATCTCAAGATGCCGGAGACGCGGGTCTTCACCGCCTTCCTCACCGCGCCGCAGGAAGTGGTGGCGCAGGGATTC
GGCAAGGACCCCATGGGCGGCCTCTCCACCTCGCGCTTCAGCGGCGAGGCGATTGCTGTGCTGCCGACCTACGTCTTCCA
GGCGCCGCCCGTGCGCCTGAGCCAGCGCGGGCTGTGA

Upstream 100 bases:

>100_bases
GCGTCAACCCGCCCTTAACCGAGCCCGGCAAGACTCTGTTGAGCATCGCACCGCGCGTACGCGCGCGGCATGGATAGACC
TGAGCCTCGGGTTCTGGATT

Downstream 100 bases:

>100_bases
CCCGCGCCTTTCGCGCGACGGTCCAGACATGAAAAAGGCCCGGCGCGATGCGCCGGGCCTTTTTGTGTTCCGAGGGGCTG
TGCCGCCTCAGGCGAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MPNKNNTRLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTLTFTNPHTGEAGSFTFKKDGR
YDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVGATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMD
FYIPGVRLAELRETGLRLQRGGVGFYPSQNFVHMDTGGVRMWPRMSREELARVFPDGKTVLIPTDGKPMSGYQLALAELE
ARGSVASDAPQADGFKGIRNFFASLFGKPAPEESDAGEVEGVQPERAPRATQVASAAPSRAATPAPAPAASAPLPPPQAS
RPVVTAVSTTPLPSARPAEIAAAAMLTAHATNAPFAPLPIKRPQAPTQVASLEPAGAPVPLPAVIMRGTSERSEIMGPPP
STALGYAAGGDIASALPPNPAIAAAPQPRLRGSSRTAADIPFGRVFRGPGLWGEAYLKMPETRVFTAFLTAPQEVVAQGF
GKDPMGGLSTSRFSGEAIAVLPTYVFQAPPVRLSQRGL

Sequences:

>Translated_518_residues
MPNKNNTRLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTLTFTNPHTGEAGSFTFKKDGR
YDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVGATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMD
FYIPGVRLAELRETGLRLQRGGVGFYPSQNFVHMDTGGVRMWPRMSREELARVFPDGKTVLIPTDGKPMSGYQLALAELE
ARGSVASDAPQADGFKGIRNFFASLFGKPAPEESDAGEVEGVQPERAPRATQVASAAPSRAATPAPAPAASAPLPPPQAS
RPVVTAVSTTPLPSARPAEIAAAAMLTAHATNAPFAPLPIKRPQAPTQVASLEPAGAPVPLPAVIMRGTSERSEIMGPPP
STALGYAAGGDIASALPPNPAIAAAPQPRLRGSSRTAADIPFGRVFRGPGLWGEAYLKMPETRVFTAFLTAPQEVVAQGF
GKDPMGGLSTSRFSGEAIAVLPTYVFQAPPVRLSQRGL
>Mature_517_residues
PNKNNTRLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTLTFTNPHTGEAGSFTFKKDGRY
DPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVGATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMDF
YIPGVRLAELRETGLRLQRGGVGFYPSQNFVHMDTGGVRMWPRMSREELARVFPDGKTVLIPTDGKPMSGYQLALAELEA
RGSVASDAPQADGFKGIRNFFASLFGKPAPEESDAGEVEGVQPERAPRATQVASAAPSRAATPAPAPAASAPLPPPQASR
PVVTAVSTTPLPSARPAEIAAAAMLTAHATNAPFAPLPIKRPQAPTQVASLEPAGAPVPLPAVIMRGTSERSEIMGPPPS
TALGYAAGGDIASALPPNPAIAAAPQPRLRGSSRTAADIPFGRVFRGPGLWGEAYLKMPETRVFTAFLTAPQEVVAQGFG
KDPMGGLSTSRFSGEAIAVLPTYVFQAPPVRLSQRGL

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=146, Percent_Identity=46.5753424657534, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 55185; Mature: 55053

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNKNNTRLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTL
CCCCCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
TFTNPHTGEAGSFTFKKDGRYDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVG
EECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
ATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMDFYIPGVRLAELRETGLRLQR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEC
GGVGFYPSQNFVHMDTGGVRMWPRMSREELARVFPDGKTVLIPTDGKPMSGYQLALAELE
CCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH
ARGSVASDAPQADGFKGIRNFFASLFGKPAPEESDAGEVEGVQPERAPRATQVASAAPSR
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
AATPAPAPAASAPLPPPQASRPVVTAVSTTPLPSARPAEIAAAAMLTAHATNAPFAPLPI
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
KRPQAPTQVASLEPAGAPVPLPAVIMRGTSERSEIMGPPPSTALGYAAGGDIASALPPNP
CCCCCCCHHHCCCCCCCCCCHHHHEECCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCC
AIAAAPQPRLRGSSRTAADIPFGRVFRGPGLWGEAYLKMPETRVFTAFLTAPQEVVAQGF
CEECCCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCHHEEEEECCCCHHHHHHCC
GKDPMGGLSTSRFSGEAIAVLPTYVFQAPPVRLSQRGL
CCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHCCCC
>Mature Secondary Structure 
PNKNNTRLPLRIWTSDRSGIALSPSVRRTARSLAVAATLFLCGTGTLQNAVANGDTRTL
CCCCCCEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE
TFTNPHTGEAGSFTFKKDGRYDPEVLKQLNWLARDWRKDEPIEMDPHLFDLLWEVYREVG
EECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
ATAPITLLCGYRSPSTNAMLRSRSKAVAETSQHMRGRAMDFYIPGVRLAELRETGLRLQR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCEEEC
GGVGFYPSQNFVHMDTGGVRMWPRMSREELARVFPDGKTVLIPTDGKPMSGYQLALAELE
CCCCCCCCCCEEEECCCCEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHH
ARGSVASDAPQADGFKGIRNFFASLFGKPAPEESDAGEVEGVQPERAPRATQVASAAPSR
HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
AATPAPAPAASAPLPPPQASRPVVTAVSTTPLPSARPAEIAAAAMLTAHATNAPFAPLPI
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
KRPQAPTQVASLEPAGAPVPLPAVIMRGTSERSEIMGPPPSTALGYAAGGDIASALPPNP
CCCCCCCHHHCCCCCCCCCCHHHHEECCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCC
AIAAAPQPRLRGSSRTAADIPFGRVFRGPGLWGEAYLKMPETRVFTAFLTAPQEVVAQGF
CEECCCCCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCHHEEEEECCCCHHHHHHCC
GKDPMGGLSTSRFSGEAIAVLPTYVFQAPPVRLSQRGL
CCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]