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The map label for this gene is luxO [H]

Identifier: 158422062

GI number: 158422062

Start: 492340

End: 493035

Strand: Direct

Name: luxO [H]

Synonym: AZC_0438

Alternate gene names: 158422062

Gene position: 492340-493035 (Clockwise)

Preceding gene: 158422059

Following gene: 158422063

Centisome position: 9.17

GC content: 70.11

Gene sequence:

>696_bases
TTGGTGGAAGACGATTTTTTCGAATGCAGCCGGGTCGAATCGGCGCTCTTGCATCAGGGGCATGAGGTGGTCTGCGTGGG
CGACGGAGACGCGGCGCTCGCCCGTCTCGATGCCGAACCGTTCGACCTCATGCTGCTCGATCTGGTGCTCCCCGGCCTCG
ACGGCATGGGCGTGCTGCGGACGCTCGAGGCGCGCGGGTCCAGCGTGCCCGTCATTGTCAGCGTGACGCCGGCCGGCATC
GACGGCGCTGCATCGGCCATCCGGGCGGGCGCGCGGGACTTCGTGGTGAAGCCCGCCGGCGCCCTTCGCCTCAAGGTGGC
GATCACGAATGCGTTGGCGCTCGCCGGGGCAGGGGCGGTGTCCGAGCGCCCTGCCGCGCCCGTTGCCGGCGCGCCGGTGC
GCCTGCGTCTGGCCCATGACGCGGACTGGACTGCGCAGGACCGCAGCGGCCAGCCGGCCCCAAAAGCCTGCGGCATCAAC
GAGAGTCTGCCGTTCCTTGATGCCCTCGGCCATACCCGCACGCTGGAGCAGCTGGAGGCGGACGCCATCCGCGCGGCGGT
TTCGCTCTACGGCGGACGCATGAGCGAGGTGGCGCGCCGCCTCGGCATCGGCCGGTCCACCCTTTACCGAAAGCTAAGTG
CTTTGGGCTTGCCTGTTCCCGAGCCGGTTTCGCCGCTGGCTGTTGCCGCCGAGTGA

Upstream 100 bases:

>100_bases
CGCCCTTTTGATGCCGCAGCTGTGCCCGTTTCGTTAACCCAGTCCGGTGAAGCTTGTGGGAATCGTGCGGGGCCGGATTC
CTATTATGTCGCGTATCCTT

Downstream 100 bases:

>100_bases
CAGGGCGGCGTCCGTCGCGTTTGGAAAGCAGGATTGATTTTGCTTTTCCGGCGGCGATGGCAATGCTCGCTATGGTTAAG
CATGTGACTCGCTGCGCGGG

Product: Fis-type protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MVEDDFFECSRVESALLHQGHEVVCVGDGDAALARLDAEPFDLMLLDLVLPGLDGMGVLRTLEARGSSVPVIVSVTPAGI
DGAASAIRAGARDFVVKPAGALRLKVAITNALALAGAGAVSERPAAPVAGAPVRLRLAHDADWTAQDRSGQPAPKACGIN
ESLPFLDALGHTRTLEQLEADAIRAAVSLYGGRMSEVARRLGIGRSTLYRKLSALGLPVPEPVSPLAVAAE

Sequences:

>Translated_231_residues
MVEDDFFECSRVESALLHQGHEVVCVGDGDAALARLDAEPFDLMLLDLVLPGLDGMGVLRTLEARGSSVPVIVSVTPAGI
DGAASAIRAGARDFVVKPAGALRLKVAITNALALAGAGAVSERPAAPVAGAPVRLRLAHDADWTAQDRSGQPAPKACGIN
ESLPFLDALGHTRTLEQLEADAIRAAVSLYGGRMSEVARRLGIGRSTLYRKLSALGLPVPEPVSPLAVAAE
>Mature_231_residues
MVEDDFFECSRVESALLHQGHEVVCVGDGDAALARLDAEPFDLMLLDLVLPGLDGMGVLRTLEARGSSVPVIVSVTPAGI
DGAASAIRAGARDFVVKPAGALRLKVAITNALALAGAGAVSERPAAPVAGAPVRLRLAHDADWTAQDRSGQPAPKACGIN
ESLPFLDALGHTRTLEQLEADAIRAAVSLYGGRMSEVARRLGIGRSTLYRKLSALGLPVPEPVSPLAVAAE

Specific function: Involved in the regulation of different processes depending on the cell density. Acts together with sigma-54 to repress, perhaps indirectly, some genes [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1790437, Length=113, Percent_Identity=28.3185840707965, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 23898; Mature: 23898

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEDDFFECSRVESALLHQGHEVVCVGDGDAALARLDAEPFDLMLLDLVLPGLDGMGVLR
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHH
TLEARGSSVPVIVSVTPAGIDGAASAIRAGARDFVVKPAGALRLKVAITNALALAGAGAV
HHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCEEEEEEEHHHHHHHCCCCC
SERPAAPVAGAPVRLRLAHDADWTAQDRSGQPAPKACGINESLPFLDALGHTRTLEQLEA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
DAIRAAVSLYGGRMSEVARRLGIGRSTLYRKLSALGLPVPEPVSPLAVAAE
HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MVEDDFFECSRVESALLHQGHEVVCVGDGDAALARLDAEPFDLMLLDLVLPGLDGMGVLR
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHH
TLEARGSSVPVIVSVTPAGIDGAASAIRAGARDFVVKPAGALRLKVAITNALALAGAGAV
HHHHCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCEEEEEEEHHHHHHHCCCCC
SERPAAPVAGAPVRLRLAHDADWTAQDRSGQPAPKACGINESLPFLDALGHTRTLEQLEA
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
DAIRAAVSLYGGRMSEVARRLGIGRSTLYRKLSALGLPVPEPVSPLAVAAE
HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA