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The map label for this gene is pepF [H]

Identifier: 158422061

GI number: 158422061

Start: 490332

End: 492236

Strand: Reverse

Name: pepF [H]

Synonym: AZC_0437

Alternate gene names: 158422061

Gene position: 492236-490332 (Counterclockwise)

Preceding gene: 158422065

Following gene: 158422060

Centisome position: 9.17

GC content: 66.72

Gene sequence:

>1905_bases
ATGGCGTTGAAGGCGGGCGCGGTTGCGCGGTATGACCGGCACAGTCGTTTCGACGCTTCTGGAGGCGCCATGTTCGGTCC
CGTTTCCTTCCTGACCCCTGACGCCGCGACCGCCTCCGCGCCGGCCACGCCGCTGCCGGAATGGAACCTTGCCGACCTCT
ATGCGGGCATGGACGATCCCAGGATCGCCACCGACCTTGCCGAGGCCGATGCCCTCTCGAAGGCCTTCGAGGCGGACTAT
AAGGGCAAGCTCGCCGATATCGCCGCCGCCGCCGATGCGGGCGCGCAGCTCGGCGCCGCCGTGAAGCGCTATGAGGCCAT
CGACGACCTGATGGGCCGTGTCGCCTCCTTCGGCAGCCTCGTCTATGCGGGCGACACCGCCGATCCGGCCCGCGCCAAGT
TCTTCAGCGACATTCAGGAAAAGCTGACCGACAGCTCCACCCATCTCCTGTTCTTCACGCTGGAGATGAACCGGCTGGAG
GATGCGCAGGTGGAAGCGGCGCTGAAGGACGCCGCCTTCGGCCACTACCGCCCATGGGTGGAAGACCTGCGCAAGGACAA
GCCCTATCAGCTCGAAGATCGCGTGGAGCAGTTGTTCCACGAGAAGTCGAGCCCGGCGCGCGGGGCCTGGGGCCGGCTGT
TCGACGAGACCATGTCCTCGCTGCGCTTCAGCGTCGACGGCAAGGAACTCGCCATCGAGCCCACGCTGAACCTGATGCAG
GACCCGAACGAGGCCGTGCGCAAGGCAGCCGGTCAGGCCCTCGCACAGACTTTCTCGGAGAACCTGCGCCTCTTCAGCCT
CATCACCAACACGCTGGCGAAGGACAAGGAAATCTCCGACCGCTGGCGCGGCTTCGAGGATGTGGCCGACAGCCGCCACC
TCGCCAACCGCGTGGAGCGCGAGGTGGTGGACGCCATGGTGGCCTCCATCCGCGAGGCCTTCCCGCGCCTGTCGCACCGC
TATTACGCCCTGAAGGCCAAGTGGTTCGGCAAGGAGAAGCTGGAGTTCTGGGACCGCAACGCCCCGCTGCCCAAGGTCGA
CACCCGCGACATCGGCTGGGACGAGGCCCGCGACACCGTCCTCGGCGCCTATTCCACCTTCTCGCCGCGCATGGCGGACA
TCGCCCGCGTCTTCTTCGACAAGAACTGGATCGATGCGCCCGTGCGCCCCGGCAAGTCGCCCGGCGCCTTCGCCCACCCG
ACCGTCCCTTCGGCGCATCCCTATGTGCTGCTGAATTACCAGGGCAAGCCGCGGGACGTGATGACGCTCGCCCACGAGCT
GGGCCACGGCGTGCATCAGGTGCTGGCCGGCCGGCAGGGCGCGCTCATGGCCCCCACCCCGCTGACGCTGGCGGAGACGG
CCTCCGTGTTCGGCGAGATGCTGACCTTCCGCCGCCTGCTCGCCGCCGCCGAGACGCCGCAGGCGCGCAAGATCATGCTC
GCCCAGAAGGTGGAGGACATGATCAATACGGTGGTCCGCCAGACCGCCTTCTACACCTTCGAGCGCAAGGTCCACACCGA
GCGCCGGCAGGGCGAGATCACCGCCGAGCGCATCGGCGAACTGTGGATGGACGTGCAGACCGAGAGCCTCGGCCCGGCCA
TCAATCTCAGCGCGGGCTACGAGACCTTCTGGACCTACATCCCGCACTTCATCCATTCGCCCTTCTATGTGTACGCCTAT
GCCTTCGGCGACTGCCTCGTGAACTCGCTCTATGCGGTCTATCAGAAGGCCTCTGACGGCTTCGCCGAGCGCTATCTGGA
GATGCTGGCGGCGGGCGGCACCAAGCACCATTCGGAGCTGCTCGCTCCCTTCGGCCTCGATGCCCGCGACCCGGCCTTCT
GGCAGACCGGCCTCGGCCTCATCGAGAGCATGATCACCGAACTGGAGCAGATGGAAGGGGCGTAA

Upstream 100 bases:

>100_bases
GATACGCGACATAATAGGAATCCGGCCCCGCACGATTCCCACAAGCTTCACCGGACTGGGTTAACGAAACGGGCACAGCT
GCGGCATCAAAAGGGCGCGC

Downstream 100 bases:

>100_bases
GCGCGCCGCTGTCCAGCCTGAAAGGGAAGACGGGGCGGCCGGTGCCGTCCCGTCACCAATGGAGCCGGCGCTCAGGAACG
CCTGCGATCATCGCGGGACG

Product: peptidase M3B protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 634; Mature: 633

Protein sequence:

>634_residues
MALKAGAVARYDRHSRFDASGGAMFGPVSFLTPDAATASAPATPLPEWNLADLYAGMDDPRIATDLAEADALSKAFEADY
KGKLADIAAAADAGAQLGAAVKRYEAIDDLMGRVASFGSLVYAGDTADPARAKFFSDIQEKLTDSSTHLLFFTLEMNRLE
DAQVEAALKDAAFGHYRPWVEDLRKDKPYQLEDRVEQLFHEKSSPARGAWGRLFDETMSSLRFSVDGKELAIEPTLNLMQ
DPNEAVRKAAGQALAQTFSENLRLFSLITNTLAKDKEISDRWRGFEDVADSRHLANRVEREVVDAMVASIREAFPRLSHR
YYALKAKWFGKEKLEFWDRNAPLPKVDTRDIGWDEARDTVLGAYSTFSPRMADIARVFFDKNWIDAPVRPGKSPGAFAHP
TVPSAHPYVLLNYQGKPRDVMTLAHELGHGVHQVLAGRQGALMAPTPLTLAETASVFGEMLTFRRLLAAAETPQARKIML
AQKVEDMINTVVRQTAFYTFERKVHTERRQGEITAERIGELWMDVQTESLGPAINLSAGYETFWTYIPHFIHSPFYVYAY
AFGDCLVNSLYAVYQKASDGFAERYLEMLAAGGTKHHSELLAPFGLDARDPAFWQTGLGLIESMITELEQMEGA

Sequences:

>Translated_634_residues
MALKAGAVARYDRHSRFDASGGAMFGPVSFLTPDAATASAPATPLPEWNLADLYAGMDDPRIATDLAEADALSKAFEADY
KGKLADIAAAADAGAQLGAAVKRYEAIDDLMGRVASFGSLVYAGDTADPARAKFFSDIQEKLTDSSTHLLFFTLEMNRLE
DAQVEAALKDAAFGHYRPWVEDLRKDKPYQLEDRVEQLFHEKSSPARGAWGRLFDETMSSLRFSVDGKELAIEPTLNLMQ
DPNEAVRKAAGQALAQTFSENLRLFSLITNTLAKDKEISDRWRGFEDVADSRHLANRVEREVVDAMVASIREAFPRLSHR
YYALKAKWFGKEKLEFWDRNAPLPKVDTRDIGWDEARDTVLGAYSTFSPRMADIARVFFDKNWIDAPVRPGKSPGAFAHP
TVPSAHPYVLLNYQGKPRDVMTLAHELGHGVHQVLAGRQGALMAPTPLTLAETASVFGEMLTFRRLLAAAETPQARKIML
AQKVEDMINTVVRQTAFYTFERKVHTERRQGEITAERIGELWMDVQTESLGPAINLSAGYETFWTYIPHFIHSPFYVYAY
AFGDCLVNSLYAVYQKASDGFAERYLEMLAAGGTKHHSELLAPFGLDARDPAFWQTGLGLIESMITELEQMEGA
>Mature_633_residues
ALKAGAVARYDRHSRFDASGGAMFGPVSFLTPDAATASAPATPLPEWNLADLYAGMDDPRIATDLAEADALSKAFEADYK
GKLADIAAAADAGAQLGAAVKRYEAIDDLMGRVASFGSLVYAGDTADPARAKFFSDIQEKLTDSSTHLLFFTLEMNRLED
AQVEAALKDAAFGHYRPWVEDLRKDKPYQLEDRVEQLFHEKSSPARGAWGRLFDETMSSLRFSVDGKELAIEPTLNLMQD
PNEAVRKAAGQALAQTFSENLRLFSLITNTLAKDKEISDRWRGFEDVADSRHLANRVEREVVDAMVASIREAFPRLSHRY
YALKAKWFGKEKLEFWDRNAPLPKVDTRDIGWDEARDTVLGAYSTFSPRMADIARVFFDKNWIDAPVRPGKSPGAFAHPT
VPSAHPYVLLNYQGKPRDVMTLAHELGHGVHQVLAGRQGALMAPTPLTLAETASVFGEMLTFRRLLAAAETPQARKIMLA
QKVEDMINTVVRQTAFYTFERKVHTERRQGEITAERIGELWMDVQTESLGPAINLSAGYETFWTYIPHFIHSPFYVYAYA
FGDCLVNSLYAVYQKASDGFAERYLEMLAAGGTKHHSELLAPFGLDARDPAFWQTGLGLIESMITELEQMEGA

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 70521; Mature: 70390

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKAGAVARYDRHSRFDASGGAMFGPVSFLTPDAATASAPATPLPEWNLADLYAGMDDP
CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
RIATDLAEADALSKAFEADYKGKLADIAAAADAGAQLGAAVKRYEAIDDLMGRVASFGSL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCE
VYAGDTADPARAKFFSDIQEKLTDSSTHLLFFTLEMNRLEDAQVEAALKDAAFGHYRPWV
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHH
EDLRKDKPYQLEDRVEQLFHEKSSPARGAWGRLFDETMSSLRFSVDGKELAIEPTLNLMQ
HHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCHHHHC
DPNEAVRKAAGQALAQTFSENLRLFSLITNTLAKDKEISDRWRGFEDVADSRHLANRVER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH
EVVDAMVASIREAFPRLSHRYYALKAKWFGKEKLEFWDRNAPLPKVDTRDIGWDEARDTV
HHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LGAYSTFSPRMADIARVFFDKNWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYQGKPRDV
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
MTLAHELGHGVHQVLAGRQGALMAPTPLTLAETASVFGEMLTFRRLLAAAETPQARKIML
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AQKVEDMINTVVRQTAFYTFERKVHTERRQGEITAERIGELWMDVQTESLGPAINLSAGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCH
ETFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAVYQKASDGFAERYLEMLAAGGTKHHSEL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH
LAPFGLDARDPAFWQTGLGLIESMITELEQMEGA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALKAGAVARYDRHSRFDASGGAMFGPVSFLTPDAATASAPATPLPEWNLADLYAGMDDP
CCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
RIATDLAEADALSKAFEADYKGKLADIAAAADAGAQLGAAVKRYEAIDDLMGRVASFGSL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCE
VYAGDTADPARAKFFSDIQEKLTDSSTHLLFFTLEMNRLEDAQVEAALKDAAFGHYRPWV
EEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHH
EDLRKDKPYQLEDRVEQLFHEKSSPARGAWGRLFDETMSSLRFSVDGKELAIEPTLNLMQ
HHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCEEEECCCHHHHC
DPNEAVRKAAGQALAQTFSENLRLFSLITNTLAKDKEISDRWRGFEDVADSRHLANRVER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHH
EVVDAMVASIREAFPRLSHRYYALKAKWFGKEKLEFWDRNAPLPKVDTRDIGWDEARDTV
HHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LGAYSTFSPRMADIARVFFDKNWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYQGKPRDV
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHH
MTLAHELGHGVHQVLAGRQGALMAPTPLTLAETASVFGEMLTFRRLLAAAETPQARKIML
HHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AQKVEDMINTVVRQTAFYTFERKVHTERRQGEITAERIGELWMDVQTESLGPAINLSAGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCH
ETFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAVYQKASDGFAERYLEMLAAGGTKHHSEL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHH
LAPFGLDARDPAFWQTGLGLIESMITELEQMEGA
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]