| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422028
Identifier: 158422028
GI number: 158422028
Start: 456411
End: 457151
Strand: Reverse
Name: 158422028
Synonym: AZC_0404
Alternate gene names: NA
Gene position: 457151-456411 (Counterclockwise)
Preceding gene: 158422030
Following gene: 158422027
Centisome position: 8.51
GC content: 68.83
Gene sequence:
>741_bases ATGAGCCACGAGACGACCGAGACACGCTTATCCGAGACCACCTTCCCCGTCACCGACCGCAACCGGGTGAAGCGCCTGCA CGAGCGCGGCTCCTATGACCGCGCGGTCGTCTATCCGATCCTCGACGCCGCCTTTCTCTGCCATGTGGCCTATGCCATCG ACGGCCAGCCTTTCGCGACGCCCACCATCCACTGGCGCGAGGGCGATACGCTCTATTGGCACGGCTCCTCCGCCAGCCGC ATGCTGCGGCACCTGAAGGGCGGCACGCCGGCCTGCCTCACCGTCGCCCATCTGGACGGCCTCGTGCTCGCCCGCTGCGG CTTCAACCATTCGGCCAACTATCGCTCGGCCATGTGCTTCGGCACTGCGCGCATCGTGGAAGAACCGGAGGAGAAGGCGC GTGCCCTCTCCGCGCTGGTGGACCGCTTCTATCCGGGCCGCGACGCCACGCTGCGCGCCTCGACCACGCAGGAGGTGAAG GCGACCATGGTCATTGCCATGCCCATCGAGGACGCCTCTGCCAAGGTGCGGGCGAAGGGCGTGGGCGATGATGAGGACGA TCTCGGCCTGCCCATCTGGGCCGGCGTCATTCCCGTGCGCACGGTGCTCGGCGCACCGGAGACGAGCCCGCATGTGCCCG CTGGCGTGCCGGTGCCGGACGGCCTCGGCATCTATGCGCTGGGGGCCCCGCTCGATGAGGCCCTGCTCGCCGCACAGCGG ATGTACGAGGCGGCGGATTAG
Upstream 100 bases:
>100_bases GCCTCGGAAAGATTGGTCTCGTCGGAACGGCGCATATTGGATCTATCTCAGGTCCAATCCAGAGCCTAGCTCTGAGCCTG CCCGCGCAGAAAGGCAAGTC
Downstream 100 bases:
>100_bases GGATCGCGTGCGAACCCGGACAGGCCTATCGTCAGCCATCCTTCCGAGTCGCCCCTCCTCGCCATGGACGCCGTCCTTCT CCGTGTGCTCTGCGTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSHETTETRLSETTFPVTDRNRVKRLHERGSYDRAVVYPILDAAFLCHVAYAIDGQPFATPTIHWREGDTLYWHGSSASR MLRHLKGGTPACLTVAHLDGLVLARCGFNHSANYRSAMCFGTARIVEEPEEKARALSALVDRFYPGRDATLRASTTQEVK ATMVIAMPIEDASAKVRAKGVGDDEDDLGLPIWAGVIPVRTVLGAPETSPHVPAGVPVPDGLGIYALGAPLDEALLAAQR MYEAAD
Sequences:
>Translated_246_residues MSHETTETRLSETTFPVTDRNRVKRLHERGSYDRAVVYPILDAAFLCHVAYAIDGQPFATPTIHWREGDTLYWHGSSASR MLRHLKGGTPACLTVAHLDGLVLARCGFNHSANYRSAMCFGTARIVEEPEEKARALSALVDRFYPGRDATLRASTTQEVK ATMVIAMPIEDASAKVRAKGVGDDEDDLGLPIWAGVIPVRTVLGAPETSPHVPAGVPVPDGLGIYALGAPLDEALLAAQR MYEAAD >Mature_245_residues SHETTETRLSETTFPVTDRNRVKRLHERGSYDRAVVYPILDAAFLCHVAYAIDGQPFATPTIHWREGDTLYWHGSSASRM LRHLKGGTPACLTVAHLDGLVLARCGFNHSANYRSAMCFGTARIVEEPEEKARALSALVDRFYPGRDATLRASTTQEVKA TMVIAMPIEDASAKVRAKGVGDDEDDLGLPIWAGVIPVRTVLGAPETSPHVPAGVPVPDGLGIYALGAPLDEALLAAQRM YEAAD
Specific function: Unknown
COG id: COG3467
COG function: function code R; Predicted flavin-nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26681; Mature: 26549
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHETTETRLSETTFPVTDRNRVKRLHERGSYDRAVVYPILDAAFLCHVAYAIDGQPFAT CCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCC PTIHWREGDTLYWHGSSASRMLRHLKGGTPACLTVAHLDGLVLARCGFNHSANYRSAMCF CEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEHHHCCEEEEECCCCCCCCCCHHHHH GTARIVEEPEEKARALSALVDRFYPGRDATLRASTTQEVKATMVIAMPIEDASAKVRAKG HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHCEEEEEEEEEECCCCCCEEEECC VGDDEDDLGLPIWAGVIPVRTVLGAPETSPHVPAGVPVPDGLGIYALGAPLDEALLAAQR CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH MYEAAD HHHCCC >Mature Secondary Structure SHETTETRLSETTFPVTDRNRVKRLHERGSYDRAVVYPILDAAFLCHVAYAIDGQPFAT CCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCC PTIHWREGDTLYWHGSSASRMLRHLKGGTPACLTVAHLDGLVLARCGFNHSANYRSAMCF CEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEHHHCCEEEEECCCCCCCCCCHHHHH GTARIVEEPEEKARALSALVDRFYPGRDATLRASTTQEVKATMVIAMPIEDASAKVRAKG HHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHCEEEEEEEEEECCCCCCEEEECC VGDDEDDLGLPIWAGVIPVRTVLGAPETSPHVPAGVPVPDGLGIYALGAPLDEALLAAQR CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHH MYEAAD HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA