| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gluQ [H]
Identifier: 158421996
GI number: 158421996
Start: 426621
End: 427529
Strand: Direct
Name: gluQ [H]
Synonym: AZC_0372
Alternate gene names: 158421996
Gene position: 426621-427529 (Clockwise)
Preceding gene: 158421992
Following gene: 158421999
Centisome position: 7.94
GC content: 70.74
Gene sequence:
>909_bases ATGACCATCGTCTGCCGCTTCGCCCCAAGCCCCAACGGCTTCCTGCATCTCGGCCACGCGCATTCGGCTCTGGTGAACCA TGCCGCCGCCACGCGCGCCGCCGGCCGCTTCCTGTTGCGCATGGAAGACATCGACACCACCCGATGTCGCCCGGAATACG AGCAGGGCATCATCGACGATCTGGACTGGCTCGGCATCCTCCCGCCCGAGCCGCCCCGCCACCAGAGCCGGCACTTCGAC GATTACGCCGCAGCCCTCGCGCGCCTTGAGGAGATGGGGCTGCTCTACGCTTCTTTCGAGACCCGCGCGGAGATCGCCCG CGCCGTCCTCGCCCGCGAGGCGGCGGGCCGGTCCTGGCCGCGTGATCCCGACGGTGTGCCGCTCTATCCCTTTTCCCGCG AGAGCATGACGGAGGCGGCCCGCGCGCGCCGCAAGGCCGAGGGCGAGCCTTATGTGCTGCGCCTCGACATGGGGCAGGCC TATGCGCTGGCGGGTGCCGGCCTCTCCTGGCACGAGGCGCCTGGCGATCCGCTGGCGGAGCCCCTGCCGGTTCAGGCCGA TCCGGCAGCCTGGGGCGATGTGGTGCTCGCCCGCAAGGACGTGCCGGCGAGCTATCATCTGGCGGTGGTGATGGATGACG ACCTGCAGGGCATCACGCATGTGATCCGCGGCCGCGACCTTTACGCCGCCACCGCCATCCATCGCCTGCTCCAGGCGCTG CTCGGCCTGCCGGCGCCCATCTATCATCACCACGCGCTGGTGCTGGACCGCGACGGGCGCAAGCTGTCTAAAAGCACGGG GGCGGCGAGCCTGTCGTCCCTGCGCGCGCTCGGCACCACGCCGGACGAGGTGCGCGCGCTCATCGCACACGGGCTGGAGC CGGCGTCTCAGCCCACCCCGAGCACGTAG
Upstream 100 bases:
>100_bases TCGCTTGGTCGCTCAGGTGAACCTCGCCCATCATGCCGCGCCTCCTTGCCCTTTTGCCCTCTCGCGCCGGAGCGGCGGTC ATGCGATGACATGGCCTGCC
Downstream 100 bases:
>100_bases AGCCAGAAGGTGATGGTGAAGAGGCCGAGGGCCGTGGACAGCGAGACGGAGCTGGAACTGGTGCCGACGCCGACGCCATA ACGCTGGGCCAGCAGATAGG
Product: glutamyl-tRNA synthetase
Products: AMP; L-Glutamyl-tRNA(Glu); Diphosphate [C]
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTIVCRFAPSPNGFLHLGHAHSALVNHAAATRAAGRFLLRMEDIDTTRCRPEYEQGIIDDLDWLGILPPEPPRHQSRHFD DYAAALARLEEMGLLYASFETRAEIARAVLAREAAGRSWPRDPDGVPLYPFSRESMTEAARARRKAEGEPYVLRLDMGQA YALAGAGLSWHEAPGDPLAEPLPVQADPAAWGDVVLARKDVPASYHLAVVMDDDLQGITHVIRGRDLYAATAIHRLLQAL LGLPAPIYHHHALVLDRDGRKLSKSTGAASLSSLRALGTTPDEVRALIAHGLEPASQPTPST
Sequences:
>Translated_302_residues MTIVCRFAPSPNGFLHLGHAHSALVNHAAATRAAGRFLLRMEDIDTTRCRPEYEQGIIDDLDWLGILPPEPPRHQSRHFD DYAAALARLEEMGLLYASFETRAEIARAVLAREAAGRSWPRDPDGVPLYPFSRESMTEAARARRKAEGEPYVLRLDMGQA YALAGAGLSWHEAPGDPLAEPLPVQADPAAWGDVVLARKDVPASYHLAVVMDDDLQGITHVIRGRDLYAATAIHRLLQAL LGLPAPIYHHHALVLDRDGRKLSKSTGAASLSSLRALGTTPDEVRALIAHGLEPASQPTPST >Mature_301_residues TIVCRFAPSPNGFLHLGHAHSALVNHAAATRAAGRFLLRMEDIDTTRCRPEYEQGIIDDLDWLGILPPEPPRHQSRHFDD YAAALARLEEMGLLYASFETRAEIARAVLAREAAGRSWPRDPDGVPLYPFSRESMTEAARARRKAEGEPYVLRLDMGQAY ALAGAGLSWHEAPGDPLAEPLPVQADPAAWGDVVLARKDVPASYHLAVVMDDDLQGITHVIRGRDLYAATAIHRLLQALL GLPAPIYHHHALVLDRDGRKLSKSTGAASLSSLRALGTTPDEVRALIAHGLEPASQPTPST
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=301, Percent_Identity=34.21926910299, Blast_Score=137, Evalue=8e-33, Organism=Escherichia coli, GI1788743, Length=282, Percent_Identity=31.5602836879433, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI226510925, Length=268, Percent_Identity=32.089552238806, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1786895, Length=96, Percent_Identity=36.4583333333333, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71993394, Length=298, Percent_Identity=28.1879194630872, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6324540, Length=284, Percent_Identity=30.9859154929577, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6321192, Length=64, Percent_Identity=40.625, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI24665321, Length=287, Percent_Identity=34.1463414634146, Blast_Score=131, Evalue=4e-31,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: 6.1.1.17 [C]
Molecular weight: Translated: 32892; Mature: 32760
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVCRFAPSPNGFLHLGHAHSALVNHAAATRAAGRFLLRMEDIDTTRCRPEYEQGIIDD CEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHCCCCC LDWLGILPPEPPRHQSRHFDDYAAALARLEEMGLLYASFETRAEIARAVLAREAAGRSWP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RDPDGVPLYPFSRESMTEAARARRKAEGEPYVLRLDMGQAYALAGAGLSWHEAPGDPLAE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCC PLPVQADPAAWGDVVLARKDVPASYHLAVVMDDDLQGITHVIRGRDLYAATAIHRLLQAL CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHH LGLPAPIYHHHALVLDRDGRKLSKSTGAASLSSLRALGTTPDEVRALIAHGLEPASQPTP HCCCCCHHHCEEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC ST CC >Mature Secondary Structure TIVCRFAPSPNGFLHLGHAHSALVNHAAATRAAGRFLLRMEDIDTTRCRPEYEQGIIDD EEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCHHHHCCCCC LDWLGILPPEPPRHQSRHFDDYAAALARLEEMGLLYASFETRAEIARAVLAREAAGRSWP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RDPDGVPLYPFSRESMTEAARARRKAEGEPYVLRLDMGQAYALAGAGLSWHEAPGDPLAE CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCC PLPVQADPAAWGDVVLARKDVPASYHLAVVMDDDLQGITHVIRGRDLYAATAIHRLLQAL CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHH LGLPAPIYHHHALVLDRDGRKLSKSTGAASLSSLRALGTTPDEVRALIAHGLEPASQPTP HCCCCCHHHCEEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC ST CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-Glutamate; tRNA (Glu) [C]
Specific reaction: ATP + L-Glutamate + tRNA (Glu) --> AMP + L-Glutamyl-tRNA(Glu) + Diphosphate [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA