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The map label for this gene is gntR [H]

Identifier: 158421987

GI number: 158421987

Start: 415716

End: 416384

Strand: Reverse

Name: gntR [H]

Synonym: AZC_0363

Alternate gene names: 158421987

Gene position: 416384-415716 (Counterclockwise)

Preceding gene: 158421988

Following gene: 158421986

Centisome position: 7.75

GC content: 71.0

Gene sequence:

>669_bases
ATGACCAGCCGCACTGAAGACACCATCGCCATCCGCATCAGCCGCACCCTCGCCGACCGGATCATCTCCGGCGAGATCGA
GCCAGGGAGCCGGCTGCGTCAGGACCATGTGGCCGCCGAGTTCGAGACCAGCCATGTCCCGGTGCGCGAGGCCTTCCGCC
GGCTTGAGGCACAGGGACTGGCGGTGAGCGAACCCCGGCGCGGCGTGCGGGTGGCCGCCTTCGACCTCAGGGACGTCCGC
GAGGTCGCCGAGATGCGGGCAGCGCTGGAAGTGCTGGCCCTGCGCAATGCCGCGCCCAACATCACCGCCACCATCCTGCA
ACAGGCGGAGGAAGCGACGCGCGCCGGCGACATCTCCCGCGACGTGCGCTCCTGGGAAGAGGCGAACCGCCGGTTCCACC
GCCTCATCATCACGCCCTGCGCCATGCCGCGCCTGCTCGCCACCATTGACGACCTGCACGCCGCCAGCGCCCGCTTCCTC
TTCGCCGCCTGGCGGCAGGACTGGGAGGCCCGCACGGACCATGACCACCGCGCCATCCTCGACGCCCTGCGGCGCGGGCA
GGTAGAGGCCGCCTGCACCATCCTCGCCAACCACGTGCAGTGGATCGGACGCCGGCCGGTGAAGTCCCGATCGGGCCCGG
AGCGGGAGATGTTCGCCATCGAGGGGTGA

Upstream 100 bases:

>100_bases
CCTAATGCCGCAATTTTCCACCCACCGCCGCGTCCCACATCCGCATCCACGGACGCGCGCCAATCTCGACATCCCCAGCG
CGCGATTTTATCTATAATTC

Downstream 100 bases:

>100_bases
GCCCCTTGCATTCCGGTCACGCCCATGGACTCCTATAGATACTGGAATCAAATTATCTATAATTGGAGTTCGCCCATGTT
GACCTCTCTGCTCGACGGCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTSRTEDTIAIRISRTLADRIISGEIEPGSRLRQDHVAAEFETSHVPVREAFRRLEAQGLAVSEPRRGVRVAAFDLRDVR
EVAEMRAALEVLALRNAAPNITATILQQAEEATRAGDISRDVRSWEEANRRFHRLIITPCAMPRLLATIDDLHAASARFL
FAAWRQDWEARTDHDHRAILDALRRGQVEAACTILANHVQWIGRRPVKSRSGPEREMFAIEG

Sequences:

>Translated_222_residues
MTSRTEDTIAIRISRTLADRIISGEIEPGSRLRQDHVAAEFETSHVPVREAFRRLEAQGLAVSEPRRGVRVAAFDLRDVR
EVAEMRAALEVLALRNAAPNITATILQQAEEATRAGDISRDVRSWEEANRRFHRLIITPCAMPRLLATIDDLHAASARFL
FAAWRQDWEARTDHDHRAILDALRRGQVEAACTILANHVQWIGRRPVKSRSGPEREMFAIEG
>Mature_221_residues
TSRTEDTIAIRISRTLADRIISGEIEPGSRLRQDHVAAEFETSHVPVREAFRRLEAQGLAVSEPRRGVRVAAFDLRDVRE
VAEMRAALEVLALRNAAPNITATILQQAEEATRAGDISRDVRSWEEANRRFHRLIITPCAMPRLLATIDDLHAASARFLF
AAWRQDWEARTDHDHRAILDALRRGQVEAACTILANHVQWIGRRPVKSRSGPEREMFAIEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=206, Percent_Identity=28.1553398058252, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000485
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25100; Mature: 24969

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRTEDTIAIRISRTLADRIISGEIEPGSRLRQDHVAAEFETSHVPVREAFRRLEAQGL
CCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
AVSEPRRGVRVAAFDLRDVREVAEMRAALEVLALRNAAPNITATILQQAEEATRAGDISR
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
DVRSWEEANRRFHRLIITPCAMPRLLATIDDLHAASARFLFAAWRQDWEARTDHDHRAIL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DALRRGQVEAACTILANHVQWIGRRPVKSRSGPEREMFAIEG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TSRTEDTIAIRISRTLADRIISGEIEPGSRLRQDHVAAEFETSHVPVREAFRRLEAQGL
CCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
AVSEPRRGVRVAAFDLRDVREVAEMRAALEVLALRNAAPNITATILQQAEEATRAGDISR
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHH
DVRSWEEANRRFHRLIITPCAMPRLLATIDDLHAASARFLFAAWRQDWEARTDHDHRAIL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
DALRRGQVEAACTILANHVQWIGRRPVKSRSGPEREMFAIEG
HHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]