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The map label for this gene is 158421919

Identifier: 158421919

GI number: 158421919

Start: 343621

End: 344838

Strand: Direct

Name: 158421919

Synonym: AZC_0295

Alternate gene names: NA

Gene position: 343621-344838 (Clockwise)

Preceding gene: 158421917

Following gene: 158421920

Centisome position: 6.4

GC content: 65.52

Gene sequence:

>1218_bases
ATGTACCTTGCCTACCAGGCCCAGTCCGACCTGATGGAGCCGGTGAAGTTCGGCGCCCATTTTGCGCGCCGCTTCCTGTC
CGGCCCGTTCATGGCCCCCTTCCAGACGCAGGCCACCCGCCAGCTCGCCGCCGCTTGCGAGATGGTGGAGCGCGTGGGCC
TCACCCACGGCCGGCCGGACTTCGGCATCCGCACCACGGAAGTCGGCAATCGCGAGGTGCCGGTGGTGGAGGAGGGCGTG
TTCCGCATGCCCTTCGGCACCCTGCTGCACTTCAAGAAGAAGGACGTGGACGTGGCCCAGCCGCGCGTCCTTGTGGTGGC
CCCGCTCTCCGGCCATTTCGCGACGCTGCTGGTGAACACCGTGCGCACGCTGCTGCCGGACCACGACGTCTTCATCACCG
ACTGGCACAACGCCCGCGACGTGCCGCTGGAGGAAGGCGGGTTCGGCTTCGACGGCTATGTGGAGCACGTCACCAAGTTC
CTCGAATTCATGGGGCCGGGCGCCCATCTCGTGGCGGTGTGCCAGCCGTGCGTGCAGGCGCTGGTGGCGGCGGCGGTGAT
GGCGCAGGAGGGAAACCCCGCCTATCCGCGCTCCATGACGCTGATGGCCGGCCCCATCGACTGCCGCATCAACCCCACCA
AGGTGAACGAACTCGCCACCTCCAAGCCCATCCGCTGGTTCGAGAACAATCTCATCTCCACGGTGCCCATGGGCTTCCCC
GGCTCTGGCCGGCGGGTCTATCCCGGCTTCGTGCAGCTCTCGGCCTTCGTGAGCATGAATTTCGGGCGCCACATGAAGGC
GCATTTCGATCTCTACGACGCACTGGTGGAAGGCGACGAGGAGAAGGCCACCACCACCAAGGTCTTCTATGACGAATATT
TCGCAGTGCTGGATCTGGCGGCGGAATTCTATCTGGAGACCGTTCAGTACGTCTTCCAGGAGTATCGCCTGCCCAAGGGC
GAGCTGACCTACAAGGGCAACCCGATCGACTTCAAGGCCATCCGCCGCACCTCGCTGCTGACGGTGGAGGGCGAGCGGGA
CGACATCTGCTCGCTCGGCCAGACGGTTGCGGCCCACGACATCTGCACCGGCCTGAAGCCCCACCGCAAGCGCCATCACA
TGCAGGCCGGCGTCGGCCACTATGGCGTCTTCAGCGGCCGCAAATGGGCCGGTCAGGTCTATCCCATCGTCCGCAACCAC
ATCCTCGCCAGCGACTGA

Upstream 100 bases:

>100_bases
TGCGTGGCTCCTCAGGGGCGGGACGGAGGCAAGATCGCATGCAGAAGCGACGGTCCTGCGGCACAGCCGCCTGCTCGAAC
GCCGGGCGAAAGGCATGCTG

Downstream 100 bases:

>100_bases
TCCGCGCGTCACGCTCACTTTCTGCCGCTCCCGTCACACCAACGTCGTGCATGGCTGGGATGTCAGCAGACCGGGCGCGC
GAGCCATTCCACGGTTGACG

Product: polyhydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; PHB De-Polymerase Domain-Containing Protein; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; Poly(3-Hydroxybutyrate) Depolymerase; Poly(3-Hydroxyalkanoate)Synthetase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; PHB De-Polymerase; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MYLAYQAQSDLMEPVKFGAHFARRFLSGPFMAPFQTQATRQLAAACEMVERVGLTHGRPDFGIRTTEVGNREVPVVEEGV
FRMPFGTLLHFKKKDVDVAQPRVLVVAPLSGHFATLLVNTVRTLLPDHDVFITDWHNARDVPLEEGGFGFDGYVEHVTKF
LEFMGPGAHLVAVCQPCVQALVAAAVMAQEGNPAYPRSMTLMAGPIDCRINPTKVNELATSKPIRWFENNLISTVPMGFP
GSGRRVYPGFVQLSAFVSMNFGRHMKAHFDLYDALVEGDEEKATTTKVFYDEYFAVLDLAAEFYLETVQYVFQEYRLPKG
ELTYKGNPIDFKAIRRTSLLTVEGERDDICSLGQTVAAHDICTGLKPHRKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILASD

Sequences:

>Translated_405_residues
MYLAYQAQSDLMEPVKFGAHFARRFLSGPFMAPFQTQATRQLAAACEMVERVGLTHGRPDFGIRTTEVGNREVPVVEEGV
FRMPFGTLLHFKKKDVDVAQPRVLVVAPLSGHFATLLVNTVRTLLPDHDVFITDWHNARDVPLEEGGFGFDGYVEHVTKF
LEFMGPGAHLVAVCQPCVQALVAAAVMAQEGNPAYPRSMTLMAGPIDCRINPTKVNELATSKPIRWFENNLISTVPMGFP
GSGRRVYPGFVQLSAFVSMNFGRHMKAHFDLYDALVEGDEEKATTTKVFYDEYFAVLDLAAEFYLETVQYVFQEYRLPKG
ELTYKGNPIDFKAIRRTSLLTVEGERDDICSLGQTVAAHDICTGLKPHRKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILASD
>Mature_405_residues
MYLAYQAQSDLMEPVKFGAHFARRFLSGPFMAPFQTQATRQLAAACEMVERVGLTHGRPDFGIRTTEVGNREVPVVEEGV
FRMPFGTLLHFKKKDVDVAQPRVLVVAPLSGHFATLLVNTVRTLLPDHDVFITDWHNARDVPLEEGGFGFDGYVEHVTKF
LEFMGPGAHLVAVCQPCVQALVAAAVMAQEGNPAYPRSMTLMAGPIDCRINPTKVNELATSKPIRWFENNLISTVPMGFP
GSGRRVYPGFVQLSAFVSMNFGRHMKAHFDLYDALVEGDEEKATTTKVFYDEYFAVLDLAAEFYLETVQYVFQEYRLPKG
ELTYKGNPIDFKAIRRTSLLTVEGERDDICSLGQTVAAHDICTGLKPHRKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNH
ILASD

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45276; Mature: 45276

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLAYQAQSDLMEPVKFGAHFARRFLSGPFMAPFQTQATRQLAAACEMVERVGLTHGRPD
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
FGIRTTEVGNREVPVVEEGVFRMPFGTLLHFKKKDVDVAQPRVLVVAPLSGHFATLLVNT
CCEEEECCCCCCCCHHHCCCEECCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
VRTLLPDHDVFITDWHNARDVPLEEGGFGFDGYVEHVTKFLEFMGPGAHLVAVCQPCVQA
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LVAAAVMAQEGNPAYPRSMTLMAGPIDCRINPTKVNELATSKPIRWFENNLISTVPMGFP
HHHHHHHHCCCCCCCCCEEEEEECCEEEEECHHHHHHHHCCCCHHHHHCCCCEECCCCCC
GSGRRVYPGFVQLSAFVSMNFGRHMKAHFDLYDALVEGDEEKATTTKVFYDEYFAVLDLA
CCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEFYLETVQYVFQEYRLPKGELTYKGNPIDFKAIRRTSLLTVEGERDDICSLGQTVAAHD
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
ICTGLKPHRKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNHILASD
HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MYLAYQAQSDLMEPVKFGAHFARRFLSGPFMAPFQTQATRQLAAACEMVERVGLTHGRPD
CEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
FGIRTTEVGNREVPVVEEGVFRMPFGTLLHFKKKDVDVAQPRVLVVAPLSGHFATLLVNT
CCEEEECCCCCCCCHHHCCCEECCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHH
VRTLLPDHDVFITDWHNARDVPLEEGGFGFDGYVEHVTKFLEFMGPGAHLVAVCQPCVQA
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LVAAAVMAQEGNPAYPRSMTLMAGPIDCRINPTKVNELATSKPIRWFENNLISTVPMGFP
HHHHHHHHCCCCCCCCCEEEEEECCEEEEECHHHHHHHHCCCCHHHHHCCCCEECCCCCC
GSGRRVYPGFVQLSAFVSMNFGRHMKAHFDLYDALVEGDEEKATTTKVFYDEYFAVLDLA
CCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEFYLETVQYVFQEYRLPKGELTYKGNPIDFKAIRRTSLLTVEGERDDICSLGQTVAAHD
HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHH
ICTGLKPHRKRHHMQAGVGHYGVFSGRKWAGQVYPIVRNHILASD
HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA